prot_H-paniculata_contig40388.10451.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig40388.10451.1
Unique Nameprot_H-paniculata_contig40388.10451.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length233
Homology
BLAST of mRNA_H-paniculata_contig40388.10451.1 vs. uniprot
Match: A0A1M2VT18_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Trametes TaxID=5324 RepID=A0A1M2VT18_TRAPU)

HSP 1 Score: 139 bits (349), Expect = 6.170e-34
Identity = 77/169 (45.56%), Postives = 101/169 (59.76%), Query Frame = 0
Query:   68 AGRNWNNTLDNFLVGIGLERSITYSCLYFSRDEGGETNLLMVVYVDDLVIAGR-RENVDEFKHNISQRFRMKDLGSLSCVLGIEVRRDRPNGTITISQGSYIREVLKRYGFYECRGVTNPVKGKVKISAPESADKS---SEPKSGNSTEYRGMVGLLMYASTGTRPDIA 232
            AGR WN TLD  L G+G  R  + +CLY  RD+ G+   L VVYVDDL++A   R  +DE K  ++ +F+M+DLG  S +LGI +RRDRP   I +SQ  YI  VL RYG  +C+    P+   VK SA +  D +   S    G S  Y  ++G +MYA  GTRPDIA
Sbjct: 1136 AGRTWNKTLDRKLTGLGFNRLDSETCLYVFRDDKGQLCFL-VVYVDDLLLAATSRAFMDEVKRKLTAQFKMRDLGEASYILGIAIRRDRPARAIYLSQRQYIDTVLDRYGMKDCKPQYTPMSASVKPSADDPEDNTTLHSITIEGRSVSYASVIGSMMYAMMGTRPDIA 1303          
BLAST of mRNA_H-paniculata_contig40388.10451.1 vs. uniprot
Match: A0A409WVI7_9AGAR (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409WVI7_9AGAR)

HSP 1 Score: 129 bits (324), Expect = 1.350e-30
Identity = 77/169 (45.56%), Postives = 101/169 (59.76%), Query Frame = 0
Query:   68 AGRNWNNTLDNFLVGIGLERSITYSCLYFSRDEGGETNLLMVVYVDDLVIAGR-RENVDEFKHNISQRFRMKDLGSLSCVLGIEVRRDRPNGTITISQGSYIREVLKRYGFYECRGVTNPVKGKVKISA--PESADKSSEPKSGNST-EYRGMVGLLMYASTGTRPDIA 232
            AGR WN T D+ L  +G  R    +CLY  R EGG+   L VVYVDDL++A   R  +DE K  ++  F+M+DLG  S VLGI++RRDR    I +SQ  YI  VLKR G  +C+ V  P+  + +++A  P + D  +E    N T  Y  +VG LMYA  GTRPDIA
Sbjct: 1156 AGRTWNKTFDSSLKDLGFTRLDAETCLYVMRGEGGKLCFL-VVYVDDLILAATSRAYMDEIKTKLAATFKMRDLGPASYVLGIQIRRDRRKRIIGLSQRQYIDTVLKRCGMEDCKPVFTPLSTQNRLTADDPINNDTLTEMTINNKTVSYATVVGSLMYAMMGTRPDIA 1323          
BLAST of mRNA_H-paniculata_contig40388.10451.1 vs. uniprot
Match: Q45W64_PHACR (Polyprotein n=1 Tax=Phanerochaete chrysosporium (strain RP-78 / ATCC MYA-4764 / FGSC 9002) TaxID=273507 RepID=Q45W64_PHACR)

HSP 1 Score: 125 bits (314), Expect = 2.880e-29
Identity = 80/248 (32.26%), Postives = 124/248 (50.00%), Query Frame = 0
Query:   25 FSQVEGEDFFETSAPVARMSTLRTAFSLAAEHDFELEGMDV--------------------------------------DAAGRNWNNTLDNFLVGI-GLERSITYSCLYFSRDEGGETNLLMVVYVDDLVIAGRRENVDEFKHNISQRFRMKDLGSLSCVLGIEVRRDRPNGTITISQGSYIREVLKRYGFYECRGVTNPVKGKVKIS-APESADKSSEPKSGNSTEYRGMVGLLMYASTGTRPDIA 232
            FSQ+ G+D+F+T +PV R  T R A +LAA  + + + +D+                                        AGR WN+ L++ L  + G  RS    CLYF  +  G+ N+ +V +VDD  + G R  +D FK ++++ F +   G+LS  +G++V R   NG I+I Q  Y+  +L+R+G  +C+ V+ P+   VK+   PE    +  P       Y   +G LMYA+TGTRPDIA
Sbjct:  904 FSQIAGQDYFDTFSPVVRQETFRVATALAATENLDSDALDIVGAYLHGPLEEEIYMRQAPGYDDGSGQVYVLIKALYGLKQAGRVWNHLLNHVLTSLMGWTRSEADPCLYFKHE--GKLNMALV-HVDDTALYGERSILDRFKADVAKHFAITTNGTLSSFVGLQVTRK--NGAISILQTRYLETILERFGMQDCKPVSTPLDPGVKLEPTPEDQTPADVP-------YAAAIGSLMYAATGTRPDIA 1139          
BLAST of mRNA_H-paniculata_contig40388.10451.1 vs. uniprot
Match: A0A146IJ40_MYCCL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146IJ40_MYCCL)

HSP 1 Score: 124 bits (312), Expect = 4.410e-29
Identity = 80/250 (32.00%), Postives = 122/250 (48.80%), Query Frame = 0
Query:   25 FSQVEGEDFFETSAPVARMSTLRTAFSLAAEHDFELEGMDVDA------------------------------------------AGRNWNNTLDNFLVGIGLERSITYSCLYFSRDEGGETNLLMVVYVDDLVIAGRREN-VDEFKHNISQRFRMKDLGSLSCVLGIEVRRDRPNGTITISQGSYIREVLKRYGFYECRGVTNPVKGKVKISAPESADKSSEPKSGNSTEYRGMVGLLMYASTGTRPDI 231
            FSQVEG D+F+T APVAR+ ++RT  +LAA  D EL  +DV                                            +GR W          +GL R  T   +++ +D  G   +++ V+VDD  I G     V+E K   ++   + DLG +  +LGIEV+R+R   T+++SQ SYI+ +++RY   + + ++ P+   V +S+ +S   + E     S  Y+  VG LMYAS GTRPDI
Sbjct:  263 FSQVEGVDYFDTFAPVARLGSVRTILALAARLDLELHQIDVKGVYLNGELTDCERIFMRQPLGFPYPNSTGKVLRLVKMLYGLKQSGRRWYQRFAEICESMGLTRCSTDQAVFYHQDANGF--VVLAVHVDDCTIGGTNTALVNEMKSGFARYVEIVDLGEIHWLLGIEVKRNRQERTLSLSQTSYIQSIVRRYNLDDLKPLSIPMDPNVTLSSAQSPRTADELARMRSVPYKEAVGSLMYASLGTRPDI 510          
BLAST of mRNA_H-paniculata_contig40388.10451.1 vs. uniprot
Match: A0A6L2N851_TANCI (Zinc finger, CCHC-type n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2N851_TANCI)

HSP 1 Score: 124 bits (312), Expect = 5.040e-29
Identity = 78/216 (36.11%), Postives = 119/216 (55.09%), Query Frame = 0
Query:   25 FSQVEGEDFFETSAPVARMSTLRTAFSLAAEHDFELEGMDVDAAGRN-------WNNTLDNFLVGIGLERSITYSCLYFSRDEGGETNLLMVVYVDDLVIAGRREN-VDEFKHNISQRFRMKDLGSLSCVLGIEVRRDRPNGTITISQGSYIREVLKRYGFYECRGVTNPVKGKVKISAPESADKSSEPKSGNSTEYRGMVGLLMYASTGTRPDIA 232
            F Q EG D+F+T APVAR+ST+R   +L A H+  +  MDV     N       +    + F++ +   +   Y C+Y+  DE G+  +++ +YVDD++I G  +N VD+ K  +S  F MK +G    +LGI ++R+  N  +TI+Q  YI ++LK++    C  V+ P++  +K S P         K  N  EY   +G LMYA T TRPDIA
Sbjct:  439 FRQTEGIDYFDTYAPVARISTIRLLIALVATHNLVIYQMDVKTTFLNSYLEEEIYMKKPEEFVMRVKEHK--VYKCVYYKFDESGK-GVIICLYVDDMLIFGTDQNQVDKTKEFLSSNFSMKYIGEADVILGIRIKRE--NKGLTITQSHYIEKILKKFNCKGCGPVSTPMEAGIK-SMPYMG------KPVNQLEYLHAIGCLMYAMTSTRPDIA 642          
BLAST of mRNA_H-paniculata_contig40388.10451.1 vs. uniprot
Match: A0A535F6U2_9CHLR (DDE-type integrase/transposase/recombinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535F6U2_9CHLR)

HSP 1 Score: 124 bits (311), Expect = 7.300e-29
Identity = 81/250 (32.40%), Postives = 119/250 (47.60%), Query Frame = 0
Query:   25 FSQVEGEDFFETSAPVARMSTLRTAFSLAAEHDFELEGMDV-----------------------------------------DAAGRNWNNTLDNFLVGIGLERSITYSCLYFSRDEGGETNLLMVVYVDDLVIAGRR-ENVDEFKHNISQRFRMKDLGSLSCVLGIEVRRDRPNGTITISQGSYIREVLKRYGFYECRGVTNPVKGKVKISAPESADKSSEPKSGNSTEYRGMVGLLMYASTGTRPDIA 232
            FSQ  G D+FET APVA+++T RT F+LAA   +E+ GMDV                                           A R WN  +  FL+ +G  RS    CLY  +       L + ++VDDL+I G+   ++   K  ++  F MKDLG L   LG+ + R   NG+I+I Q  YIR++L+R+G    + V+ P+    ++   E+          N  +Y+ MVG LMYA   +RPD+A
Sbjct:  970 FSQAYGVDYFETYAPVAKLTTYRTIFALAALEQWEIHGMDVITAYLLGKLNEEIYMMQPEGFVRMGMKRNMVCRLLRSLYGLKQAARVWNQKIHAFLIKLGFVRSNADPCLYIKKF------LYITIWVDDLLIVGKNGRDIANVKGQLAGEFEMKDLGKLEYFLGMRIMRSL-NGSISIDQNGYIRQILERFGMEASKPVSTPIATGTRLVIGETES--------NIKQYQAMVGSLMYAMLCSRPDLA 1204          
BLAST of mRNA_H-paniculata_contig40388.10451.1 vs. uniprot
Match: A0A7D9L6A0_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9L6A0_PARCT)

HSP 1 Score: 117 bits (294), Expect = 1.350e-28
Identity = 70/208 (33.65%), Postives = 111/208 (53.37%), Query Frame = 0
Query:   25 FSQVEGEDFFETSAPVARMSTLRTAFSLAAEHDFELEGMDVDAAGRNWNNTLDNFLVGIGLERSITYSCLYFSRDEGGETNLLMVVYVDDLVIAGRREN-VDEFKHNISQRFRMKDLGSLSCVLGIEVRRDRPNGTITISQGSYIREVLKRYGFYECRGVTNPVKGKVKISAPESADKSSEPKSGNSTEYRGMVGLLMYASTGTRPDI 231
            ++Q+EG DFF+T AP  +  T R   + AA  D  L       A +NW   L + L+  G +RS    CL+  ++E G T   ++V+VDD+V+AG  E  ++E K   ++ F+M D G L+  LG+++ R   +  IT+ Q  YI  VL+ +   +C+ V  P +  +K+       K  +PK      YR +VG L+++   TRPDI
Sbjct:   54 YAQIEGLDFFDTYAPTCKPETFRILLATAARKDLYL-------AAKNWYEALTSLLLKKGFKRSCNDYCLFVRKEENG-TFPYVLVWVDDIVVAGATEEAINEIKSMSNENFKMDDRGDLNWFLGMQILR--LHDKITVDQTKYIETVLQEFNMSDCKAVATPGEVNLKLVKSNEGKKLVDPKL-----YRSLVGSLLFSGKQTRPDI 246          
BLAST of mRNA_H-paniculata_contig40388.10451.1 vs. uniprot
Match: H3H946_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H946_PHYRM)

HSP 1 Score: 119 bits (299), Expect = 4.830e-28
Identity = 76/207 (36.71%), Postives = 116/207 (56.04%), Query Frame = 0
Query:   27 QVEGEDFFETSAPVARMSTLRTAFSLAAEHDFELEGMDVDAAGRNWNNTLDNFLVGIGLERSITYSCLYFSRDEGGETNLLMVVYVDDLVIAGRRENVD-EFKHNISQRFRMKDLGSLSCVLGIEVRRDRPNGTITISQGSYIREVLKRYGFYECRGVTNPVKGKVKISAPESADKSSEPKSGNSTEYRGMVGLLMYASTGTRPDIA 232
            Q  G DF ET APVARMST R   +LAA+    L G+    +GR WN+ L+ +L   G ++S+T  CLY+  D  G+T + ++VYVDD ++A   E    +   ++ + + +KD G L+  LGIEV +   +  I I Q  Y RE+L++ G+ E   V NP++   ++        + E +      YR  +G+LMY +T TRPD+A
Sbjct:  196 QRPGVDFRETFAPVARMSTFRLLLALAAK--LALYGLR--QSGREWNSELNQWLGEHGYQQSLTEPCLYYRFD--GDTIMYVLVYVDDKLVATNNEQCKKDLFVDLDKAYGIKDQGQLNEYLGIEVEQTAEH--IVIRQSKYAREILEKLGYSEAHAVGNPMEVNTRL-----VPTNDEEEVNTEFPYREAIGMLMYLTTSTRPDLA 389          
BLAST of mRNA_H-paniculata_contig40388.10451.1 vs. uniprot
Match: A0A8D8C7F0_CULPI (Copia protein (Fragment) n=1 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8C7F0_CULPI)

HSP 1 Score: 120 bits (300), Expect = 5.280e-28
Identity = 77/246 (31.30%), Postives = 112/246 (45.53%), Query Frame = 0
Query:   25 FSQVEGEDFFETSAPVARMSTLRTAFSLAAEHDFELEGMDVDAA--------------------------------------GRNWNNTLDNFLVGIGLERSITYSCLYFSRDEGGETNLLMVVYVDDLVIAGRREN-VDEFKHNISQRFRMKDLGSLSCVLGIEVRRDRPNGTITISQGSYIREVLKRYGFYECRGVTNPVKGKVKISAPESADKSSEPKSGNSTEYRGMVGLLMYASTGTRPDI 231
            F Q    D+ +T APVA++ST+R   ++  +  FE   MDV  A                                       + WNN L +FL  +  ERS    CLY          L +++YVDDL+I G   + +   K  +S  FRMKDLG L   +G+ +R D   GT+TI Q  +   +L+R+G   C  V  P++  VK  + ES+D+         T +R ++G LMY   GTRPD+
Sbjct:  110 FQQTASVDYHDTFAPVAKLSTVRFLLAVGIQRSFEFWHMDVTTAFLYGELDETIFMKPPPGLDVEAGKVCELKRSLYGLKQSPKCWNNRLHSFLSSLNFERSDADYCLYVRIAH--TERLYILLYVDDLLICGNNSSEIAVLKQQLSAEFRMKDLGQLEYFMGMRIRIDDAAGTVTIDQTVFAERILERFGMEACNAVATPLELGVKFDSAESSDEVR-------TNFRQLIGSLMYLMLGTRPDL 346          
BLAST of mRNA_H-paniculata_contig40388.10451.1 vs. uniprot
Match: A0A401G4V0_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401G4V0_9APHY)

HSP 1 Score: 121 bits (304), Expect = 6.370e-28
Identity = 76/247 (30.77%), Postives = 119/247 (48.18%), Query Frame = 0
Query:   25 FSQVEGEDFFETSAPVARMSTLRTAFSLAAEHDFELEGMDVDAA--------------------------------------GRNWNNTLDNFLVGIGLERSITYSCLYFSRDEGGETNLLMVVYVDD-LVIAGRRENVDEFKHNISQRFRMKDLGSLSCVLGIEVRRDRPNGTITISQGSYIREVLKRYGFYECRGVTNPVKGKVKISAPESADKSSEPKSGNSTEYRGMVGLLMYASTGTRPDIA 232
            F+QVEG DF ET APVA+ +++RT  +LAA+ D E+  MDV +A                                      GR W   +      +G  R  +   +++  D+G    L++ +YVDD L+++     V   K ++  RF M DLG    +LG+E+ RDRP   + +SQ  Y+ + L ++G  +CR V+ P+    K+     A+   +P       Y+ ++G LMYA  GTRPD+A
Sbjct:  998 FTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPPGFHRSNSLVWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDDG--ILLIIAIYVDDMLILSDNLTAVTTLKEDLKSRFEMTDLGEARWLLGMEITRDRPRRVLELSQHQYVEKCLAQHGMADCRPVSTPMAQNQKLVKLSEAEIDPKP-------YQSVLGSLMYAMIGTRPDLA 1235          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40388.10451.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1M2VT18_TRAPU6.170e-3445.56Retrovirus-related Pol polyprotein from transposon... [more]
A0A409WVI7_9AGAR1.350e-3045.56Integrase catalytic domain-containing protein (Fra... [more]
Q45W64_PHACR2.880e-2932.26Polyprotein n=1 Tax=Phanerochaete chrysosporium (s... [more]
A0A146IJ40_MYCCL4.410e-2932.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6L2N851_TANCI5.040e-2936.11Zinc finger, CCHC-type n=1 Tax=Tanacetum cinerarii... [more]
A0A535F6U2_9CHLR7.300e-2932.40DDE-type integrase/transposase/recombinase n=1 Tax... [more]
A0A7D9L6A0_PARCT1.350e-2833.65Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
H3H946_PHYRM4.830e-2836.71Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A8D8C7F0_CULPI5.280e-2831.30Copia protein (Fragment) n=1 Tax=Culex pipiens Tax... [more]
A0A401G4V0_9APHY6.370e-2830.77Retrovirus-related Pol polyprotein from transposon... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 68..187
e-value: 1.6E-22
score: 80.3
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 25..232

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig40388contigH-paniculata_contig40388:204..1083 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig40388.10451.1mRNA_H-paniculata_contig40388.10451.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig40388 39..1118 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig40388.10451.1 ID=prot_H-paniculata_contig40388.10451.1|Name=mRNA_H-paniculata_contig40388.10451.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=233bp
MDFQAETEGGRQRGTLQSATGGSRFSQVEGEDFFETSAPVARMSTLRTAF
SLAAEHDFELEGMDVDAAGRNWNNTLDNFLVGIGLERSITYSCLYFSRDE
GGETNLLMVVYVDDLVIAGRRENVDEFKHNISQRFRMKDLGSLSCVLGIE
VRRDRPNGTITISQGSYIREVLKRYGFYECRGVTNPVKGKVKISAPESAD
KSSEPKSGNSTEYRGMVGLLMYASTGTRPDIA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2