prot_H-paniculata_contig4029.10431.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4029.10431.1
Unique Nameprot_H-paniculata_contig4029.10431.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length627
Homology
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BLAST of mRNA_H-paniculata_contig4029.10431.1 vs. uniprot
Match: A0A6H5KMF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMF0_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 8.430e-23
Identity = 88/198 (44.44%), Postives = 106/198 (53.54%), Query Frame = 0 
Query:  440 MISVEPFGDQSETIRLESVASRRGGGGXXXXXXXX----TRSFHAIRCFNAQTDMTALELLRKGFVQDDQNDL-------------TSTVAATPIRRLQSIPLLPYLLSGG---DDANVENNNIAGRR--------------------------ESLFDLGLTRRECNSEVRRTVEAFSLNRDQARLLWRCSRWFRCA 591
            M+SV P GD SE +RLE+ A  RGG  XXXXXXXX    +RS HAIRCFNAQTD++AL+LLR G + DD                  +      +  L S+P+L +LLSGG   DD N   N                                + +FDL LTR E N+EV +TVEAF LNRDQARLLWRC+ WFR A
Sbjct:    1 MLSVGPLGDDSEALRLEATA--RGGAXXXXXXXXXXXXXSRSIHAIRCFNAQTDLSALDLLRNGRLGDDXXXXXXXXXXXXXXXXXNALGRGKGLLDLDSVPVLRFLLSGGLAPDDCNSSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDRVFDLCLTRGERNAEVSQTVEAFRLNRDQARLLWRCATWFRPA 196
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4029.10431.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KMF0_9PHAE8.430e-2344.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4029contigH-paniculata_contig4029:3554..9541 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4029.10431.1mRNA_H-paniculata_contig4029.10431.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4029 3553..9541 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4029.10431.1 ID=prot_H-paniculata_contig4029.10431.1|Name=mRNA_H-paniculata_contig4029.10431.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=627bp
EDQSPHNRVEGSDGADATTMYPVPSLGAANRPIGRPGVSDPSGRRPAFAR
PRPGAKVSSRPLNPPARPTRPFPSLDSDASLSTQTMVTNSNNPGHSSSYH
RVITGYWKTTATMTASSRNHQQEGKEGDVMPPFGLKFGGGSSDADASAIV
PTVSEPGCRGGPGNSNATRHRPQAKGQEDIRKQDGGARGSEAEMGGLSST
TRMPSSPPPPPPPPPQAAGSAGGGLGRRWPSRMVGIPNAFPDTTSYRSAY
AKAMQEEMQLIFDEAVVTPYANAEAKLASRDTRAGPRPDRRDPLWRQKHF
RREGVHYYSSVAFFRAGGGSGSSSRSDHKRYGEGKGGGGGSGGWFDGGRK
KGRHRGRSNGDGGCGSEDEDNDADSNRNSGGSDTTGKLYLKILGFSESKE
TSAAYGKGDVWALSETGRFTDVGDAVFCRSIWSGVSSQGMISVEPFGDQS
ETIRLESVASRRGGGGSRRGGSGSTRSFHAIRCFNAQTDMTALELLRKGF
VQDDQNDLTSTVAATPIRRLQSIPLLPYLLSGGDDANVENNNIAGRRESL
FDLGLTRRECNSEVRRTVEAFSLNRDQARLLWRCSRWFRCATNVPPRHDG
ADGSEDEKGGEARVGGEDGAGGRRGRE
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