prot_H-paniculata_contig4022.10420.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4022.10420.1
Unique Nameprot_H-paniculata_contig4022.10420.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length346
Homology
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BLAST of mRNA_H-paniculata_contig4022.10420.1 vs. uniprot
Match: A0A6H5KM30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM30_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 2.010e-22
Identity = 75/224 (33.48%), Postives = 94/224 (41.96%), Query Frame = 0 
Query:  108 TPAKCLIVCPTGAEASIVVCLAALLTFFPFPPDRSNETARGNNLEKCKRPQEMEMFGHDAVVDAATTAESGASSENSHVLMGXXXXXATSEDDKRCPRSCSYGSSRDSTTGWQGCGATHPSIAGQSQQPTQQDTGEERGTSDDDKQETQTEDTVSAEQEGRRREGRFEVLARGLT--VTKADVRWRFLLLQEECPWARPPRRLMQQLNEYFMTPGEQSWATLRD 329
            T  KCL+VCPTGA+AS+VVCL AL+ FFP  P  +  T  GN  ++ ++ Q +      A+V  A  A+ G    NS + +G                                                                                  G F VL R     VTK+ +RWRFLL+Q+ECPWA PPRR MQ+LNEYFMTPGE SW TL D
Sbjct:  564 TAGKCLVVCPTGADASVVVCLCALVAFFPPGPQANTNTPSGNQNQQPQQQQLLSPSSRHALV--ADEADGG----NSGLWLGG---------------------------------------------------------------------------------GGFSVLPRTAAGVVTKSQLRWRFLLMQQECPWAHPPRRSMQELNEYFMTPGEHSWWTLSD 700
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BLAST of mRNA_H-paniculata_contig4022.10420.1 vs. uniprot
Match: D7G7K2_ECTSI (Transferase, transferring pentosyl groups, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7K2_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 9.680e-21
Identity = 74/223 (33.18%), Postives = 85/223 (38.12%), Query Frame = 0 
Query:  111 KCLIVCPTGAEASIVVCLAALLTFFPFPPDRSNETARGNNLEKCKRPQEMEMFG--HDAVVDAATTAESGASSENSHVLMGXXXXXATSEDDKRCPRSCSYGSSRDSTTGWQGCGATHPSIAGQSQQPTQQDTGEERGTSDDDKQETQTEDTVSAEQEGRRREGRFEVLARGLT--VTKADVRWRFLLLQEECPWARPPRRLMQQLNEYFMTPGEQSWATLRD 329
            KCL+VC TGA+AS+VVCL AL+ FFP  P  S  T  GN          +      H  V D     +SG                                        W G                                                  GRF VL R     VTK+ +RWRFLL+Q+ECPWARPPRR MQ+LNEYFMTPGE SW TL D
Sbjct:  387 KCLVVCATGADASVVVCLCALVAFFPPGPQASTNTPSGNRXXXXXXXXXLPSPSSRHALVADETDGGDSGL---------------------------------------WLGG-------------------------------------------------GRFSVLRRSAAGVVTKSQLRWRFLLMQQECPWARPPRRSMQELNEYFMTPGEHSWWTLSD 521
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4022.10420.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KM30_9PHAE2.010e-2233.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7K2_ECTSI9.680e-2133.18Transferase, transferring pentosyl groups, putativ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4022contigH-paniculata_contig4022:10347..12099 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4022.10420.1mRNA_H-paniculata_contig4022.10420.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4022 10160..12126 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4022.10420.1 ID=prot_H-paniculata_contig4022.10420.1|Name=mRNA_H-paniculata_contig4022.10420.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=346bp
MSPSVGGETVAGGVGGGDSRSDGVGHHLLIPSSSSSSSLPQQHQRPRQSL
MKSPPKRELLLLQQAHNIHLGYERVPRPSSHHRQKQQQHLRKTPEVSTYH
RGQQQQATPAKCLIVCPTGAEASIVVCLAALLTFFPFPPDRSNETARGNN
LEKCKRPQEMEMFGHDAVVDAATTAESGASSENSHVLMGGGDPPATSEDD
KRCPRSCSYGSSRDSTTGWQGCGATHPSIAGQSQQPTQQDTGEERGTSDD
DKQETQTEDTVSAEQEGRRREGRFEVLARGLTVTKADVRWRFLLLQEECP
WARPPRRLMQQLNEYFMTPGEQSWATLRDALLVLAAPDSANDGFP*
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