prot_H-paniculata_contig40036.10384.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig40036.10384.1
Unique Nameprot_H-paniculata_contig40036.10384.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length45
Homology
BLAST of mRNA_H-paniculata_contig40036.10384.1 vs. uniprot
Match: A0A1L2F1W9_9PHAE (Photosystem II reaction center protein K n=3 Tax=Fucales TaxID=3009 RepID=A0A1L2F1W9_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 1.200e-18
Identity = 40/44 (90.91%), Postives = 43/44 (97.73%), Query Frame = 0
Query:    1 MEIILLTKLPELYAMYSPIVDILPIVPVLFLLLAFLWQASVGFR 44
            ME +LLTKLPELYA+YSPIVDILPI+PVLFLLLAFLWQASVGFR
Sbjct:    1 MESVLLTKLPELYAIYSPIVDILPIIPVLFLLLAFLWQASVGFR 44          
BLAST of mRNA_H-paniculata_contig40036.10384.1 vs. uniprot
Match: A0A7S6U9V7_9STRA (Photosystem II reaction center protein K n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9V7_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.940e-15
Identity = 34/44 (77.27%), Postives = 42/44 (95.45%), Query Frame = 0
Query:    1 MEIILLTKLPELYAMYSPIVDILPIVPVLFLLLAFLWQASVGFR 44
            MEIIL++KLP+ Y ++SPI+DILPIVPVLFLLLAF+WQA+VGFR
Sbjct:    1 MEIILISKLPDAYTIFSPIIDILPIVPVLFLLLAFVWQAAVGFR 44          
BLAST of mRNA_H-paniculata_contig40036.10384.1 vs. uniprot
Match: A0A8F0F735_9PHAE (Photosystem II reaction center protein K n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F735_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 1.940e-15
Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 0
Query:    1 MEIILLTKLPELYAMYSPIVDILPIVPVLFLLLAFLWQASVGFR 44
            M I+ L KLPELY ++SP+VDILP+VPVLFLLLAFLWQASVGFR
Sbjct:    1 MVILFLNKLPELYLIFSPVVDILPVVPVLFLLLAFLWQASVGFR 44          
BLAST of mRNA_H-paniculata_contig40036.10384.1 vs. uniprot
Match: A0A2I4Q318_9PHAE (Photosystem II reaction center protein K n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q318_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 2.750e-15
Identity = 33/44 (75.00%), Postives = 40/44 (90.91%), Query Frame = 0
Query:    1 MEIILLTKLPELYAMYSPIVDILPIVPVLFLLLAFLWQASVGFR 44
            M ++ L KLPELY ++SP+VDILP++PVLFLLLAFLWQASVGFR
Sbjct:    1 MVVVFLNKLPELYVIFSPLVDILPVIPVLFLLLAFLWQASVGFR 44          
BLAST of mRNA_H-paniculata_contig40036.10384.1 vs. uniprot
Match: B7T221_VAULI (Photosystem II reaction center protein K n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T221_VAULI)

HSP 1 Score: 70.5 bits (171), Expect = 2.750e-15
Identity = 34/44 (77.27%), Postives = 41/44 (93.18%), Query Frame = 0
Query:    1 MEIILLTKLPELYAMYSPIVDILPIVPVLFLLLAFLWQASVGFR 44
            ME ILLTKLPE YA++SPI+DILPI+P+ FLLLAF+WQA+VGFR
Sbjct:    1 MEGILLTKLPEAYAIFSPIIDILPIIPIFFLLLAFVWQAAVGFR 44          
BLAST of mRNA_H-paniculata_contig40036.10384.1 vs. uniprot
Match: B2XT42_HETAK (Photosystem II reaction center protein K n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=B2XT42_HETAK)

HSP 1 Score: 68.6 bits (166), Expect = 1.600e-14
Identity = 33/44 (75.00%), Postives = 40/44 (90.91%), Query Frame = 0
Query:    1 MEIILLTKLPELYAMYSPIVDILPIVPVLFLLLAFLWQASVGFR 44
            ME ILL KLPE Y ++SPIVD+LP++PVLFLLLAF+WQASVGF+
Sbjct:    1 MEGILLAKLPEAYTIFSPIVDVLPVIPVLFLLLAFVWQASVGFK 44          
BLAST of mRNA_H-paniculata_contig40036.10384.1 vs. uniprot
Match: A0A8E5XRF5_9PHAE (Photosystem II reaction center protein K n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRF5_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 1.600e-14
Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 0
Query:    1 MEIILLTKLPELYAMYSPIVDILPIVPVLFLLLAFLWQASVGFR 44
            ME ILL KLP  YA++SPI+DILPI+PV FLLLAF+WQASVGFR
Sbjct:    1 MESILLAKLPTAYAIFSPIIDILPIIPVFFLLLAFVWQASVGFR 44          
BLAST of mRNA_H-paniculata_contig40036.10384.1 vs. uniprot
Match: A0A1C9CCI5_9RHOD (Photosystem II reaction center protein K n=1 Tax=Bangiopsis subsimplex TaxID=139980 RepID=A0A1C9CCI5_9RHOD)

HSP 1 Score: 67.4 bits (163), Expect = 4.680e-14
Identity = 31/42 (73.81%), Postives = 40/42 (95.24%), Query Frame = 0
Query:    3 IILLTKLPELYAMYSPIVDILPIVPVLFLLLAFLWQASVGFR 44
            +ILLTKLPE YA++ P++DILPI+PVLFLL+AF+WQA+VGFR
Sbjct:    4 LILLTKLPEAYAIFRPLIDILPIIPVLFLLMAFVWQAAVGFR 45          
BLAST of mRNA_H-paniculata_contig40036.10384.1 vs. uniprot
Match: PSBK_PHATC (Photosystem II reaction center protein K n=46 Tax=Sar TaxID=2698737 RepID=PSBK_PHATC)

HSP 1 Score: 66.6 bits (161), Expect = 9.260e-14
Identity = 30/44 (68.18%), Postives = 40/44 (90.91%), Query Frame = 0
Query:    1 MEIILLTKLPELYAMYSPIVDILPIVPVLFLLLAFLWQASVGFR 44
            ME +LL++LPE Y ++SPIVD+LPI+PV FLLLAF+WQA++GFR
Sbjct:    1 METLLLSRLPEAYVVFSPIVDVLPIIPVFFLLLAFVWQAAIGFR 44          
BLAST of mRNA_H-paniculata_contig40036.10384.1 vs. uniprot
Match: K9ZXR9_9STRA (Photosystem II reaction center protein K n=8 Tax=Monodopsidaceae TaxID=425072 RepID=K9ZXR9_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 9.260e-14
Identity = 31/41 (75.61%), Postives = 40/41 (97.56%), Query Frame = 0
Query:    4 ILLTKLPELYAMYSPIVDILPIVPVLFLLLAFLWQASVGFR 44
            ILL KLP+++A++SPIVDILP++PVLFLLLAF+WQA+VGFR
Sbjct:    4 ILLAKLPDVFAVFSPIVDILPVIPVLFLLLAFVWQAAVGFR 44          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40036.10384.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1L2F1W9_9PHAE1.200e-1890.91Photosystem II reaction center protein K n=3 Tax=F... [more]
A0A7S6U9V7_9STRA1.940e-1577.27Photosystem II reaction center protein K n=1 Tax=S... [more]
A0A8F0F735_9PHAE1.940e-1579.55Photosystem II reaction center protein K n=1 Tax=P... [more]
A0A2I4Q318_9PHAE2.750e-1575.00Photosystem II reaction center protein K n=1 Tax=D... [more]
B7T221_VAULI2.750e-1577.27Photosystem II reaction center protein K n=1 Tax=V... [more]
B2XT42_HETAK1.600e-1475.00Photosystem II reaction center protein K n=2 Tax=H... [more]
A0A8E5XRF5_9PHAE1.600e-1477.27Photosystem II reaction center protein K n=1 Tax=I... [more]
A0A1C9CCI5_9RHOD4.680e-1473.81Photosystem II reaction center protein K n=1 Tax=B... [more]
PSBK_PHATC9.260e-1468.18Photosystem II reaction center protein K n=46 Tax=... [more]
K9ZXR9_9STRA9.260e-1475.61Photosystem II reaction center protein K n=8 Tax=M... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003687Photosystem II PsbKPFAMPF02533PsbKcoord: 4..44
e-value: 5.2E-24
score: 84.1
IPR003687Photosystem II PsbKPANTHERPTHR35325FAMILY NOT NAMEDcoord: 4..44
IPR003687Photosystem II PsbKHAMAPMF_00441PSII_PsbKcoord: 6..44
score: 17.789
NoneNo IPR availablePANTHERPTHR35325:SF1PHOTOSYSTEM II REACTION CENTER PROTEIN Kcoord: 4..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..37
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..44
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..14
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
IPR037270Photosystem II PsbK superfamilySUPERFAMILY161037Photosystem II reaction center protein K, PsbKcoord: 8..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig40036contigH-paniculata_contig40036:584..718 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig40036.10384.1mRNA_H-paniculata_contig40036.10384.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig40036 584..718 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig40036.10384.1 ID=prot_H-paniculata_contig40036.10384.1|Name=mRNA_H-paniculata_contig40036.10384.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=45bp
MEIILLTKLPELYAMYSPIVDILPIVPVLFLLLAFLWQASVGFR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003687PSII_PsbK
IPR037270PSII_PsbK_sf