prot_H-paniculata_contig40031.10382.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig40031.10382.1
Unique Nameprot_H-paniculata_contig40031.10382.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length368
Homology
BLAST of mRNA_H-paniculata_contig40031.10382.1 vs. uniprot
Match: D8LNL3_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNL3_ECTSI)

HSP 1 Score: 301 bits (772), Expect = 8.920e-96
Identity = 168/378 (44.44%), Postives = 240/378 (63.49%), Query Frame = 0
Query:    5 WDIFVLAVTVAACCVIARAKVYSLTDDNFDSFMDQVPDDGLLLDDFHTPLCRACQRLAAVIDYLDLEWGQQEADPANQWFLVAKVDCSRNERLATVFGIEHFPGLRFVRAGQWSTYEGKRSIEGIQEFKKRMAIVELPALNKEKLHELVKSEQVVFVLATETDADPTSEAPGVALAATGLRQSLTLGTMNGEVLASLGMPARS-TPALIKVIAGPDGLLSLPFDGK----------------LRSASYLAITRWVERENHPLLAEFGPDNFSRLGLTGKLLVIGVVDPSKKETAGVEQTLRRVASRMGLELSDKMVFGIMDGIMLKGFAETLNVFDGLPRLAVLDMARDSFFSTPEDMTLEPVDIEAFLFSVLSGDVP 365
            W + +LAV +A  C IA   V++L D++FD F+  +P+  LLL DF+ P CR CQRL  V+DYL+ EW ++E D + +WF +AKVD  +N RL TVFGI   P LRFVRAG+W TY+G R IE I+EFK+RMA+V L  ++ + L  L +S + VFVL+   DADP++ APGV LAAT  +   T  T + EVLASLG+     +PAL+KV+AG  G L  P   K                + +AS  ++  WVERE   L+++  PDNF RLG  G+L+V+GV DP  + T    +    VAS MG+  S++++FG ++ + + GF ET NV++G P++ V+D+A D F+ T E+M +E  ++EAFL  VL+G +P
Sbjct:   11 WALRLLAV-IAVVCTIALGGVHNLGDNDFDDFVADLPEQALLLVDFYKPGCRHCQRLNPVLDYLEAEWEKEEPDDSKRWFKLAKVDIEKNPRLKTVFGIAKLPDLRFVRAGRWGTYQGGRLIEDIKEFKERMALVPLRFVDADALTGLARSSEAVFVLSANEDADPSTVAPGVLLAATLSQHEATFCTTSPEVLASLGLGVSGVSPALVKVVAGQGGRLLQPAAYKTERGTQGVNDDSATVSVAAASSWSVLSWVERERFGLVSDLSPDNFMRLGSLGRLMVLGVFDPKHEATRSFRKVFGDVASDMGVRHSERLMFGTVNRVTMPGFMETFNVYEGHPQVIVMDIASDEFY-TLENMRMEVGEMEAFLIDVLAGFIP 386          
BLAST of mRNA_H-paniculata_contig40031.10382.1 vs. uniprot
Match: A0A4P9X089_9FUNG (Uncharacterized protein n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9X089_9FUNG)

HSP 1 Score: 79.7 bits (195), Expect = 1.390e-12
Identity = 84/321 (26.17%), Postives = 138/321 (42.99%), Query Frame = 0
Query:   50 FHTPLCRACQRLAAVIDYLDLEWGQQEADPANQWFLVAKVDCSRNERLATVFGIEHFPGLRFVR--AGQWSTYEGKRSIEGIQEFKKRMAIVELPALNKEKLHELVKSEQVVFVLATETDADPTSEAPGV--ALAATGLRQSLTLGTMNGEVLASLGMPARSTPALIKVIAGPDG----LLSLPFDGKLRSASYLAITRWVERENHPLLAEFGPDNFSRLGLTGKLLVIGVVDPSKKETAGVEQTLRRVAS--------------RMGLELSDKMVFGIMDGIMLKGFAETLNVFDG--LPRLAVLDMARDSFFSTPEDMT 346
            FH   C  CQ LA V + L  E  QQ          V K++C+ N      + I  +P L+++   AG  + Y G RS+  + ++ K+   V   A++  +L +L + E+VVFV     +  P +EA  +  AL AT +R    +  +   V    G   R   A+   +A  D     L+     G+ R    +A+  WV++  HPL+ E    N + +    +L+V+G+ +  K E+A + + LR  A               R G      ++F  +DG     +   +  F    LPRL V D   D+++    D T
Sbjct:  169 FHASWCGHCQHLAPVWERLGPELLQQVN--------VGKIECTVNPNACNNYAIRGYPTLKYINQAAGLETEYNGDRSVRSMTQWAKQQHRVPFEAVDAARLQQLQQKEEVVFVFLV--NGAPAAEAETMLGALLATTIRYHSHVTVV---VCPDAGARERVMKAMPAPLASQDPHAPRLVVSREHGRDRG-DQIALNEWVQQHRHPLVVELHSGNSNEILGGDRLVVLGIFNMMKPESATMVKRLREHAQAWNARQQAVDTDTHRAGTPSLRPVMFTTIDGANWSNYISRVYGFQTHELPRLLVGDPHADAYWDVDADGT 475          
BLAST of mRNA_H-paniculata_contig40031.10382.1 vs. uniprot
Match: A0A6V7M8C1_9HYME (Thioredoxin domain-containing protein n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7M8C1_9HYME)

HSP 1 Score: 56.6 bits (135), Expect = 3.200e-5
Identity = 74/329 (22.49%), Postives = 129/329 (39.21%), Query Frame = 0
Query:   51 HTPLCRACQRLAAVIDYLDLEWGQQEADPANQWFLVAKVDCSRNERLATVFGIEHFPGLRFVRAGQWSTYEGKRSIEGIQEFKKRMAIVELPALNKEKLHELVKSEQVVFVLATETDADP-------TSEAPGVALAATGLRQSLTLGTMNGEVLASLGMPARSTPALIKVIAGPDGLLSLPFDGKLRSASYLAITRWVERENHPLLAEFGPDNFSRLGLTGKLLVIGVVDPSKKETAGVEQT-----LRRVASRMGLELSDKMVFG-IMDGIMLKGFAETLNVFDGLPRLAVLDMARDSFFSTPEDMT-LEPVDIEAFLFSVLSGDVP 365
            + P C  C+RL  V       W     +       V +VDC+R   +A  F I+ FP + F++  Q  TY G R+ E I +F  R++   +  + + +  E +K+++ ++ L       P       T+EA           Q       +  V+     P +  PA++ V         +P D    ++    +  WV +E      +    N ++L LTGK LV+ VV+ +  E    +       +  V  +   +  D   FG I +  ++ G A    +    P L V++          +D + L P  IE FL  + +   P
Sbjct:    2 YAPWCTHCKRLEPV-------WSHVAQNLYASSIRVGRVDCTRFTSVAQHFKIKGFPTILFLKGEQKFTYNGDRTREEIVKFALRLSGPPVQEITRTESFETLKADRELYFLYVGERVGPLWDIYHKTAEA----------FQPHAFFYQSHPVVVDKNAPIKRIPAIV-VYKENTHYTFIPKDHMDLASLNETMYNWVNKERFQTFPKVTWGNINQLFLTGKNLVLAVVEENAVEDVAPDMLEFRDMVESVIKKKRAKYHDDFQFGWIANPELVNGIAM---MEMSTPSLIVINXXXXXXXXPDDDPSKLTPHAIEMFLEHIKNETAP 309          
BLAST of mRNA_H-paniculata_contig40031.10382.1 vs. uniprot
Match: UPI0006C9B959 (protein disulfide-isomerase TMX3 n=1 Tax=Trichogramma pretiosum TaxID=7493 RepID=UPI0006C9B959)

HSP 1 Score: 56.6 bits (135), Expect = 3.520e-5
Identity = 84/357 (23.53%), Postives = 134/357 (37.54%), Query Frame = 0
Query:   16 ACCVIARAKVYSLTDDNFDSFMDQVPDDGLLLDDFHTPLCRACQRLAAVIDYLDLEWGQQEADPANQWFLVAKVDCSRNERLATVFGIEHFPGLRFVRAGQWSTYEGKRSIEGIQEFKKRMAIVELPALNKEKLHELVKSE-QVVFVLATETDADPTSEAPGVALAATGLRQSLTLGTMNGEVLASLGMPARSTPALIKVIAGPDGLLSLPFDGKLRSASYLAITRWVERENHPLLAEFGPDNFSRLGLTGKLLVIGVVDPSKKETAGVEQT-----LRRVASRMGLELSDKMVFGIMDGIMLKGFAETLNVFDGLPRLAVLDMARDS-FFSTPEDMTLEPVDIEAFLFSVLSGDVP 365
            AC VI  +   S   +  D  +D +  +G  L   + P C  C+RL  V       W        +    V ++DC+R + +A  F I+ FP + F +  Q   Y G R+ + I +F  R++   +  + +    + +K + +V F+   E           VA     + Q       +  V+     P   TP L           S   D   R      I +WV  E  P   +    N  +L LTGK LV+ VV+ +  E    +       +  V  R   +  D   FG +    L      + V   LP L V++   +  +F   E   L P  IE FL  + + + P
Sbjct:   12 ACTVIVSSTEASRVLELSDKLLD-IHKEGPWLIMMYAPWCAHCKRLEPV-------WAHVAQYLHSTSIRVGRIDCTRFKNVAHTFQIKGFPTIMFFKGDQQFVYNGDRTRDEIVKFALRLSGPVVQEVTRTTSFDTLKKDREVYFLYVGERSGMIWDIYHNVA----SIFQPHAFFYQSHPVVVDKHAPIVKTPTLFVYKENSHYNFS-GHDITDRKKLNETIYKWVNAERFPTFPKVTQGNIYQLYLTGKNLVLAVVEENPLEEVSPDMLEFKDMVESVIKRKRQKYHDHFQFGWVANPELVNRIAMMVV--PLPSLIVINTTTNHHYFPEDEPEKLTPHAIELFLEHIRNENAP 353          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40031.10382.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LNL3_ECTSI8.920e-9644.44Thioredoxin domain-containing protein n=1 Tax=Ecto... [more]
A0A4P9X089_9FUNG1.390e-1226.17Uncharacterized protein n=1 Tax=Caulochytrium prot... [more]
A0A6V7M8C1_9HYME3.200e-522.49Thioredoxin domain-containing protein n=1 Tax=Brac... [more]
UPI0006C9B9593.520e-523.53protein disulfide-isomerase TMX3 n=1 Tax=Trichogra... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13848Thioredoxin_6coord: 225..356
e-value: 2.4E-10
score: 40.6
NoneNo IPR availableGENE3D3.40.30.10coord: 246..368
e-value: 1.1E-11
score: 47.1
NoneNo IPR availableGENE3D3.40.30.10coord: 21..135
e-value: 2.4E-18
score: 68.2
NoneNo IPR availablePANTHERPTHR46426FAMILY NOT NAMEDcoord: 7..365
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..368
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..17
score: 5.0
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 25..132
e-value: 5.1E-12
score: 45.7
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 25..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig40031contigH-paniculata_contig40031:174..1277 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig40031.10382.1mRNA_H-paniculata_contig40031.10382.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig40031 174..1277 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig40031.10382.1 ID=prot_H-paniculata_contig40031.10382.1|Name=mRNA_H-paniculata_contig40031.10382.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=368bp
MVKLWDIFVLAVTVAACCVIARAKVYSLTDDNFDSFMDQVPDDGLLLDDF
HTPLCRACQRLAAVIDYLDLEWGQQEADPANQWFLVAKVDCSRNERLATV
FGIEHFPGLRFVRAGQWSTYEGKRSIEGIQEFKKRMAIVELPALNKEKLH
ELVKSEQVVFVLATETDADPTSEAPGVALAATGLRQSLTLGTMNGEVLAS
LGMPARSTPALIKVIAGPDGLLSLPFDGKLRSASYLAITRWVERENHPLL
AEFGPDNFSRLGLTGKLLVIGVVDPSKKETAGVEQTLRRVASRMGLELSD
KMVFGIMDGIMLKGFAETLNVFDGLPRLAVLDMARDSFFSTPEDMTLEPV
DIEAFLFSVLSGDVPLTK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf