prot_H-paniculata_contig4003.10380.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4003.10380.1
Unique Nameprot_H-paniculata_contig4003.10380.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length111
Homology
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BLAST of mRNA_H-paniculata_contig4003.10380.1 vs. uniprot
Match: A0A6H5KXK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK4_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 1.570e-16
Identity = 35/70 (50.00%), Postives = 47/70 (67.14%), Query Frame = 0 
Query:   40 PPYQIQQLYREGRFDSCHDSWSDLKICIKANLAWTTEEAHQIMQQVSYKQRQGDKNPSMAIWERKTKPSF 109
            P  Q    YREGR+ SC D W D K  I A +    ++A ++++ +SY+QRQGD NPS+AIWERK +PSF
Sbjct:   23 PVSQATHYYREGRYTSCSDCWKDFKTSIAAKMCNEEQDALELLKGLSYRQRQGDLNPSLAIWERKEEPSF 92
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BLAST of mRNA_H-paniculata_contig4003.10380.1 vs. uniprot
Match: A0A1E7FHM2_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FHM2_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 1.580e-7
Identity = 26/68 (38.24%), Postives = 37/68 (54.41%), Query Frame = 0 
Query:   42 YQIQQLYREGRFDSCHDSWSDLKICIKANLAWTTEEAHQIMQQVSYKQRQGDKNPSMAIWERKTKPSF 109
            YQI  LYR GRFDSC   W D+K  IK       ++A +++    +K+R      + AIWE K +P +
Sbjct:   69 YQIDHLYRLGRFDSCKKQWGDVKTAIKIKFTRDPKKAQELLDSTYFKKRTTISPTAGAIWELKERPGW 136
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4003.10380.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KXK4_9PHAE1.570e-1650.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1E7FHM2_9STRA1.580e-738.24Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021475Protein of unknown function DUF3128PFAMPF11326DUF3128coord: 42..103
e-value: 1.2E-9
score: 38.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4003contigH-paniculata_contig4003:7734..13041 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4003.10380.1mRNA_H-paniculata_contig4003.10380.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4003 7597..14213 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4003.10380.1 ID=prot_H-paniculata_contig4003.10380.1|Name=mRNA_H-paniculata_contig4003.10380.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=111bp
MHKKENEKASSNSLKERCCTSLSVCTQKVRGPDLRTSEDPPYQIQQLYRE
GRFDSCHDSWSDLKICIKANLAWTTEEAHQIMQQVSYKQRQGDKNPSMAI
WERKTKPSFY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021475DUF3128