prot_H-paniculata_contig400.10371.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig400.10371.1
Unique Nameprot_H-paniculata_contig400.10371.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length145
Homology
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BLAST of mRNA_H-paniculata_contig400.10371.1 vs. uniprot
Match: D7G7Z5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Z5_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 1.650e-10
Identity = 38/90 (42.22%), Postives = 53/90 (58.89%), Query Frame = 0 
Query:   52 GQAQIQRGSAAIKEIPEMEDVPEDPILFQKSLGARAEQINLALLELKPKLTALKDPQARREVELHVRDLTRRGHLISEAKRKLDAILLER 141
            G+A +Q  S     +P  +   E     Q  L AR ++IN  + EL P+  A+KDP+ARREVEL ++ L R G  ++E  R+LDAIL ER
Sbjct:   13 GRAILQGSSKLSSRLPRPQVQLEQAQQQQAHLAARVQRINATIEELYPRTAAVKDPEARREVELRLKGLARHGLFVTETWRELDAILAER 102
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig400.10371.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7Z5_ECTSI1.650e-1042.22Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..144
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig400contigH-paniculata_contig400:26725..29791 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig400.10371.1mRNA_H-paniculata_contig400.10371.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig400 25390..29991 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig400.10371.1 ID=prot_H-paniculata_contig400.10371.1|Name=mRNA_H-paniculata_contig400.10371.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=145bp
MMIMVPAASVLRFTSRRLVHMSTSVRSAVIAINMTADLRNHEEVPHAGKH
QGQAQIQRGSAAIKEIPEMEDVPEDPILFQKSLGARAEQINLALLELKPK
LTALKDPQARREVELHVRDLTRRGHLISEAKRKLDAILLERWQT*
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