prot_H-paniculata_contig39985.10355.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig39985.10355.1
Unique Nameprot_H-paniculata_contig39985.10355.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length48
Homology
BLAST of mRNA_H-paniculata_contig39985.10355.1 vs. uniprot
Match: D8LU34_ECTSI (U-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU34_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 7.310e-20
Identity = 40/47 (85.11%), Postives = 44/47 (93.62%), Query Frame = 0
Query:    1 AVVEARVSYDEEEASLGDVPDEFLDPVLCHVMRDPVLLPTSGTVLDR 47
            AV+EAR SY+  EASLG+VPDEFLDPVLCHVMRDPVLLPTSGT+LDR
Sbjct:  867 AVIEARASYEASEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTILDR 913          
BLAST of mRNA_H-paniculata_contig39985.10355.1 vs. uniprot
Match: A0A8H7VP33_9FUNG (U-box domain-containing protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7VP33_9FUNG)

HSP 1 Score: 67.0 bits (162), Expect = 9.820e-12
Identity = 29/37 (78.38%), Postives = 32/37 (86.49%), Query Frame = 0
Query:   11 EEEASLGDVPDEFLDPVLCHVMRDPVLLPTSGTVLDR 47
            EEE  LGDVPDEFLDP+L  VM DPVLLPTSGT++DR
Sbjct: 1007 EEEEELGDVPDEFLDPILSSVMEDPVLLPTSGTIVDR 1043          
BLAST of mRNA_H-paniculata_contig39985.10355.1 vs. uniprot
Match: R4XJD8_TAPDE (Ubiquitin conjugation factor E4 n=1 Tax=Taphrina deformans (strain PYCC 5710 / ATCC 11124 / CBS 356.35 / IMI 108563 / JCM 9778 / NBRC 8474) TaxID=1097556 RepID=R4XJD8_TAPDE)

HSP 1 Score: 64.3 bits (155), Expect = 8.750e-11
Identity = 25/47 (53.19%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    1 AVVEARVSYDEEEASLGDVPDEFLDPVLCHVMRDPVLLPTSGTVLDR 47
            +V + +V Y ++E  LGD+PDEFLDP++  +M+DPV+LPTS T++DR
Sbjct:  929 SVEKRKVEYQQDEDDLGDIPDEFLDPLIGELMKDPVMLPTSKTIIDR 975          
BLAST of mRNA_H-paniculata_contig39985.10355.1 vs. uniprot
Match: H2Y6Z0_CIOSA (U-box domain-containing protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2Y6Z0_CIOSA)

HSP 1 Score: 62.0 bits (149), Expect = 1.710e-10
Identity = 26/46 (56.52%), Postives = 35/46 (76.09%), Query Frame = 0
Query:    2 VVEARVSYDEEEASLGDVPDEFLDPVLCHVMRDPVLLPTSGTVLDR 47
            V E R+  ++ E   G++PDEF DP++  +MRDPVLLPTSGTV+DR
Sbjct:  107 VEECRIKLNKAEVDYGEIPDEFKDPLMDTLMRDPVLLPTSGTVMDR 152          
BLAST of mRNA_H-paniculata_contig39985.10355.1 vs. uniprot
Match: A0A6V1PG80_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PG80_HETAK)

HSP 1 Score: 60.8 bits (146), Expect = 1.930e-10
Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = 0
Query:   13 EASLGDVPDEFLDPVLCHVMRDPVLLPTSGTVLDR 47
            E  LGD PDEF+DPVLCH+MRDPV LP SGT++DR
Sbjct:   58 ELELGDAPDEFVDPVLCHLMRDPVRLP-SGTIMDR 91          
BLAST of mRNA_H-paniculata_contig39985.10355.1 vs. uniprot
Match: A0A077WVI4_9FUNG (U-box domain-containing protein n=3 Tax=Lichtheimia TaxID=688353 RepID=A0A077WVI4_9FUNG)

HSP 1 Score: 63.2 bits (152), Expect = 2.240e-10
Identity = 27/36 (75.00%), Postives = 30/36 (83.33%), Query Frame = 0
Query:   12 EEASLGDVPDEFLDPVLCHVMRDPVLLPTSGTVLDR 47
            EE  LGDVPDEFLDP+L  VM DPVLLPTS T++DR
Sbjct:  989 EEEELGDVPDEFLDPILSSVMEDPVLLPTSNTIVDR 1024          
BLAST of mRNA_H-paniculata_contig39985.10355.1 vs. uniprot
Match: A0A0D6EQ36_SPOSA (SPOSA6832_03872-mRNA-1:cds n=1 Tax=Sporidiobolus salmonicolor TaxID=5005 RepID=A0A0D6EQ36_SPOSA)

HSP 1 Score: 63.2 bits (152), Expect = 2.240e-10
Identity = 28/45 (62.22%), Postives = 37/45 (82.22%), Query Frame = 0
Query:    3 VEARVSYDEEEASLGDVPDEFLDPVLCHVMRDPVLLPTSGTVLDR 47
            VEA  + DEE+ +LG++PDEFLDP+   +MRDPV+LP+S TVLDR
Sbjct: 1122 VEAIKAADEEDEALGEIPDEFLDPLTYDLMRDPVILPSSKTVLDR 1166          
BLAST of mRNA_H-paniculata_contig39985.10355.1 vs. uniprot
Match: A0A0N8PZU9_RHOGW (U-box domain-containing protein n=1 Tax=Rhodotorula graminis (strain WP1) TaxID=578459 RepID=A0A0N8PZU9_RHOGW)

HSP 1 Score: 62.8 bits (151), Expect = 3.060e-10
Identity = 28/45 (62.22%), Postives = 37/45 (82.22%), Query Frame = 0
Query:    3 VEARVSYDEEEASLGDVPDEFLDPVLCHVMRDPVLLPTSGTVLDR 47
            VEA  + +EE+ +LGD+PDEFLDP+   VMRDPVLLP+S T++DR
Sbjct:  844 VEAIKTAEEEDEALGDLPDEFLDPLTYDVMRDPVLLPSSKTIVDR 888          
BLAST of mRNA_H-paniculata_contig39985.10355.1 vs. uniprot
Match: A0A8H7PMH3_9FUNG (U-box domain-containing protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7PMH3_9FUNG)

HSP 1 Score: 62.8 bits (151), Expect = 3.060e-10
Identity = 25/43 (58.14%), Postives = 33/43 (76.74%), Query Frame = 0
Query:    5 ARVSYDEEEASLGDVPDEFLDPVLCHVMRDPVLLPTSGTVLDR 47
            +R    EEE  LGD+PDEF+DP+L H+M DPV+LPTS  ++DR
Sbjct:  909 SRQEEHEEEDELGDIPDEFIDPILSHLMEDPVVLPTSNMIVDR 951          
BLAST of mRNA_H-paniculata_contig39985.10355.1 vs. uniprot
Match: A0A369J974_HYPMA (Ubiquitin conjugation factor E4 n=1 Tax=Hypsizygus marmoreus TaxID=39966 RepID=A0A369J974_HYPMA)

HSP 1 Score: 62.8 bits (151), Expect = 3.060e-10
Identity = 28/46 (60.87%), Postives = 35/46 (76.09%), Query Frame = 0
Query:    2 VVEARVSYDEEEASLGDVPDEFLDPVLCHVMRDPVLLPTSGTVLDR 47
            V EA+   +EEE  LG+VPDEFLDP++  VMRDPV LP+S  +LDR
Sbjct:  987 VEEAKTLMEEEEEDLGEVPDEFLDPLMATVMRDPVRLPSSKAILDR 1032          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig39985.10355.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU34_ECTSI7.310e-2085.11U-box domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A8H7VP33_9FUNG9.820e-1278.38U-box domain-containing protein n=1 Tax=Mucor circ... [more]
R4XJD8_TAPDE8.750e-1153.19Ubiquitin conjugation factor E4 n=1 Tax=Taphrina d... [more]
H2Y6Z0_CIOSA1.710e-1056.52U-box domain-containing protein n=1 Tax=Ciona savi... [more]
A0A6V1PG80_HETAK1.930e-1074.29Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A077WVI4_9FUNG2.240e-1075.00U-box domain-containing protein n=3 Tax=Lichtheimi... [more]
A0A0D6EQ36_SPOSA2.240e-1062.22SPOSA6832_03872-mRNA-1:cds n=1 Tax=Sporidiobolus s... [more]
A0A0N8PZU9_RHOGW3.060e-1062.22U-box domain-containing protein n=1 Tax=Rhodotorul... [more]
A0A8H7PMH3_9FUNG3.060e-1058.14U-box domain-containing protein n=1 Tax=Umbelopsis... [more]
A0A369J974_HYPMA3.060e-1060.87Ubiquitin conjugation factor E4 n=1 Tax=Hypsizygus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003613U box domainPFAMPF04564U-boxcoord: 19..47
e-value: 3.9E-8
score: 33.3
IPR003613U box domainPROSITEPS51698U_BOXcoord: 18..47
score: 11.068
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 18..47
e-value: 2.1E-7
score: 32.9
NoneNo IPR availablePANTHERPTHR13931UBIQUITINATION FACTOR E4coord: 2..47
NoneNo IPR availablePANTHERPTHR13931:SF2UBIQUITIN CONJUGATION FACTOR E4 Acoord: 2..47
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 5..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig39985contigH-paniculata_contig39985:977..1120 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig39985.10355.1mRNA_H-paniculata_contig39985.10355.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig39985 977..1120 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig39985.10355.1 ID=prot_H-paniculata_contig39985.10355.1|Name=mRNA_H-paniculata_contig39985.10355.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=48bp
AVVEARVSYDEEEASLGDVPDEFLDPVLCHVMRDPVLLPTSGTVLDR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003613Ubox_domain
IPR013083Znf_RING/FYVE/PHD