prot_H-paniculata_contig39915.10341.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig39915.10341.1
Unique Nameprot_H-paniculata_contig39915.10341.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length171
Homology
BLAST of mRNA_H-paniculata_contig39915.10341.1 vs. uniprot
Match: A0A4S4L116_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4L116_9AGAM)

HSP 1 Score: 141 bits (356), Expect = 1.830e-37
Identity = 71/167 (42.51%), Postives = 99/167 (59.28%), Query Frame = 0
Query:    4 PCREDFSTCKRIFRYLSTVPDLGIAFGGKSNGHGLEGFVDGDWAEDIKDRKSTTGYVFKLRGGAISWCSREQQIVTWPSTEAKYVAGGEAGDETVYLGELLGSIGFGCRGSTRLFENNKSAINLSKGSGAQCRTKHVGMRWHGIREWIREGILALKYVQTGDQLADI 170
            P  E      R+ RYL    D  + + G      L GFVD DWA ++ DR+S +G+VFK+  GAISW S++Q      ST+A+YVAG  A  E V+L  L   I   C+G T LF +N+SA+ +++      RTKH+G R H +RE + +G L LKY+ TGDQ+AD+
Sbjct:  220 PTEEALHALMRMLRYLCRTSDTRLVYRGTQKEE-LTGFVDADWAGNVNDRRSISGFVFKVADGAISWSSKKQGSTALSSTKAEYVAGTHAAKELVWLWALFAEISLPCKGPTTLFMDNQSAMAIAENPVYHARTKHIGARHHFLRERVEDGELELKYLPTGDQMADV 385          
BLAST of mRNA_H-paniculata_contig39915.10341.1 vs. uniprot
Match: A0A090C2V0_HYAAE (RxLR effector candidate protein (Fragment) n=3 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=A0A090C2V0_HYAAE)

HSP 1 Score: 137 bits (346), Expect = 6.740e-37
Identity = 70/169 (41.42%), Postives = 103/169 (60.95%), Query Frame = 0
Query:    3 DPCREDFSTCKRIFRYLSTVPDLGIAFGGKSNGHGLEGFVDGDWAEDIKDRKSTTGYVFKLRGGAISWCSREQQIVTWPSTEAKYVAGGEAGDETVYLGELLGSIG-FGCRGSTRLFENNKSAINLSKGSGAQCRTKHVGMRWHGIREWIREGILALKYVQTGDQLADI 170
            DPC   +   KR+ RYL   P+ G+ F  +  G  + G+ D DWA DI+ R+ST+GYVF + GG ISW S++Q+ V   STEA+Y+A  EA  E V+L   LG +G      + ++FE+N+ +I L+K      RTKH+ +R+H +RE +  G + L+Y  T D LAD+
Sbjct:   68 DPCPTHWQALKRVLRYLQATPNHGLEFT-REEGSRICGYTDADWAGDIESRRSTSGYVFMMNGGCISWKSQKQRTVALSSTEAEYMALSEATKEAVWLKVFLGELGEMTSDEAIKMFEDNQGSIALAKNPEFHKRTKHIDIRYHFVREKVESGEVILEYCSTQDMLADM 235          
BLAST of mRNA_H-paniculata_contig39915.10341.1 vs. uniprot
Match: UPI0006A737CF (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=UPI0006A737CF)

HSP 1 Score: 139 bits (349), Expect = 8.680e-37
Identity = 75/172 (43.60%), Postives = 103/172 (59.88%), Query Frame = 0
Query:    1 MEDPCREDFSTCKRIFRYLSTVPDLGIAF--GGKSNGHGLEGFVDGDWAEDIKDRKSTTGYVFKLRGGAISWCSREQQIVTWPSTEAKYVAGGEAGDETVYLGELLGSIGFGCRGSTRLFENNKSAINLSKGSGAQCRTKHVGMRWHGIREWIREGILALKYVQTGDQLADI 170
            ME+P  E     K I RY+      GI +  GG+     L G+VD D+A D  DRKST+G+ F   GGA+SW S++Q IVT  +TEA+YVA      + V++  +L  IGFG    T LF +N SAI LSK      R+KH+ +R+H +RE + EGI++ +Y  T +QLADI
Sbjct:  152 MENPREEHMMAVKHIMRYVKGTAGFGIQYLCGGEEK---LVGYVDSDYAGDEDDRKSTSGFTFMFGGGAVSWSSKKQPIVTLSTTEAEYVAAANGACQAVWMRNMLTEIGFGQGDGTVLFCDNSSAIKLSKNLVLHGRSKHIHVRFHFLRELVNEGIISTEYCSTHEQLADI 320          
BLAST of mRNA_H-paniculata_contig39915.10341.1 vs. uniprot
Match: A0A6D2JBX5_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JBX5_9BRAS)

HSP 1 Score: 139 bits (350), Expect = 1.170e-36
Identity = 72/170 (42.35%), Postives = 104/170 (61.18%), Query Frame = 0
Query:    1 MEDPCREDFSTCKRIFRYLSTVPDLGIAFGGKSNGHGLEGFVDGDWAEDIKDRKSTTGYVFKLRGGAISWCSREQQIVTWPSTEAKYVAGGEAGDETVYLGELLGSIGFGCRGSTRLFENNKSAINLSKGSGAQCRTKHVGMRWHGIREWIREGILALKYVQTGDQLADI 170
            ME+P  +     KRI RY+      GI +  +  G  L GFVD D+A D+ DRKST+GYVF L GGA+SW S++Q IVT  +TEA++VA      + ++L  +LG IG+     T LF +N S I LSK      R+KH+ +R++ +R+ + E ++ LK+  T DQL+DI
Sbjct:  184 MENPNEQHLLAAKRILRYVQGTCGFGIRYK-QGEGEKLVGFVDSDYAGDVDDRKSTSGYVFMLGGGAVSWASKKQPIVTLSTTEAEFVAAAYGACQAMWLRNILGEIGWAQEEGTTLFCDNSSTIKLSKNPVLHGRSKHIHVRYYFLRDLVNEEVILLKFCGTEDQLSDI 352          
BLAST of mRNA_H-paniculata_contig39915.10341.1 vs. uniprot
Match: A0A1Y1N3K4_PHOPY (Uncharacterized protein n=2 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1N3K4_PHOPY)

HSP 1 Score: 135 bits (341), Expect = 1.620e-36
Identity = 71/162 (43.83%), Postives = 100/162 (61.73%), Query Frame = 0
Query:    9 FSTCKRIFRYLSTVPDLGIAFGGKSNGHGLEGFVDGDWAEDIKDRKSTTGYVFKLRGGAISWCSREQQIVTWPSTEAKYVAGGEAGDETVYLGELLGSIGFGCRGSTRLFENNKSAINLSKGSGAQCRTKHVGMRWHGIREWIREGILALKYVQTGDQLADI 170
            ++  KRI RYL    DLGI +    +   + GF D D+A D+  RKSTTGYVF +  GAI+WCSR QQ  +  +TEA+YVA  EA  E ++L  LL  I      + +L+ +N+SAI L K      RTKH+ +R+H I+E  + G + ++YV++ DQLADI
Sbjct:   74 WNAVKRIMRYLKHTKDLGIRY--TFSDEPVHGFSDSDYASDVDTRKSTTGYVFNMANGAITWCSRRQQTTSVSTTEAEYVAAAEATKEAIWLRHLLSEISGKSIENVQLYVDNQSAIKLVKNPIFHKRTKHIDVRYHFIKEKFQNGDIKIEYVRSEDQLADI 233          
BLAST of mRNA_H-paniculata_contig39915.10341.1 vs. uniprot
Match: UPI001AAD17B1 (secreted RxLR effector protein 161-like n=2 Tax=Rana temporaria TaxID=8407 RepID=UPI001AAD17B1)

HSP 1 Score: 134 bits (337), Expect = 4.620e-36
Identity = 71/172 (41.28%), Postives = 106/172 (61.63%), Query Frame = 0
Query:    1 MEDPCREDFSTCKRIFRYLSTVPD--LGIAFGGKSNGHGLEGFVDGDWAEDIKDRKSTTGYVFKLRGGAISWCSREQQIVTWPSTEAKYVAGGEAGDETVYLGELLGSIGFGCRGSTRLFENNKSAINLSKGSGAQCRTKHVGMRWHGIREWIREGILALKYVQTGDQLADI 170
            +  P + D++  KRI RYL    D  L ++  GKS   GL G+VD DWA D  DRKST+G++F  + G ISW +R+Q  VT  STEA+YVA  +AG E ++L +LL  +    + ST ++E+N+  I L++      RTKH+ +R+H +R+   +G + L+Y  T + LADI
Sbjct:   51 VSQPTQMDWNAAKRIIRYLKGTIDFKLKLSSTGKS---GLTGYVDADWAGDPSDRKSTSGHLFLFKDGLISWTTRKQSTVTLSSTEAEYVAASQAGQEVIWLRQLLEDLDQNQKESTPIYEDNQGCIALAQTERINPRTKHIDVRYHFLRDLQEQGQMDLRYCPTEEMLADI 219          
BLAST of mRNA_H-paniculata_contig39915.10341.1 vs. uniprot
Match: Q9C7Y1_ARATH (Copia-type polyprotein, putative; 28768-32772 n=3 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9C7Y1_ARATH)

HSP 1 Score: 141 bits (356), Expect = 8.320e-36
Identity = 77/172 (44.77%), Postives = 105/172 (61.05%), Query Frame = 0
Query:    1 MEDPCREDFSTCKRIFRYLSTVPDLGIAF--GGKSNGHGLEGFVDGDWAEDIKDRKSTTGYVFKLRGGAISWCSREQQIVTWPSTEAKYVAGGEAGDETVYLGELLGSIGFGCRGSTRLFENNKSAINLSKGSGAQCRTKHVGMRWHGIREWIREGILALKYVQTGDQLADI 170
            ME P  +     KRI RY+    DLGI +  GG +    L GFVD D+A D+ DRKST+GYVF L GGAI+W S++Q IVT  +TEA++V+      + V+L  +L  IG    G T +F +N S I LSK      R+KH+ +R+H +RE ++EG + L Y  T DQ+ADI
Sbjct: 1142 MESPNEQHLLAVKRILRYVQGTLDLGIQYERGGATE---LVGFVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEFVSASYGACQAVWLRNVLEEIGCRQEGGTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDYCTTTDQVADI 1310          
BLAST of mRNA_H-paniculata_contig39915.10341.1 vs. uniprot
Match: A0A2I0ANN3_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0ANN3_9ASPA)

HSP 1 Score: 132 bits (331), Expect = 1.090e-35
Identity = 74/172 (43.02%), Postives = 104/172 (60.47%), Query Frame = 0
Query:    1 MEDPCREDFSTCKRIFRYLSTVPDLGIAF--GGKSNGHGLEGFVDGDWAEDIKDRKSTTGYVFKLRGGAISWCSREQQIVTWPSTEAKYVAGGEAGDETVYLGELLGSIGFGCRGSTRLFENNKSAINLSKGSGAQCRTKHVGMRWHGIREWIREGILALKYVQTGDQLADI 170
            ME P        KRIFRYL    D G+ +  G KS+   L GF D D+A D+ DRKST+GYVF +  GAISW SR+Q IVT  +TEA++VA      + ++L  +L  I F   GST ++ +N SAI LSK      R+KH+ +++H +R+  R G + L Y ++ DQ+AD+
Sbjct:    1 MECPKEVHLMAAKRIFRYLQGTIDYGLLYKKGEKSD---LIGFTDSDYAGDLDDRKSTSGYVFFMGSGAISWSSRKQSIVTLSTTEAEFVAASACVCQAIWLRNILEEIHFKQEGSTLIYCDNISAIKLSKNPVLHGRSKHIDIKYHFLRDLTRNGTIDLIYCKSEDQVADL 169          
BLAST of mRNA_H-paniculata_contig39915.10341.1 vs. uniprot
Match: A0A4Y9ZY34_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZY34_9AGAM)

HSP 1 Score: 140 bits (354), Expect = 1.520e-35
Identity = 67/157 (42.68%), Postives = 96/157 (61.15%), Query Frame = 0
Query:   14 RIFRYLSTVPDLGIAFGGKSNGHGLEGFVDGDWAEDIKDRKSTTGYVFKLRGGAISWCSREQQIVTWPSTEAKYVAGGEAGDETVYLGELLGSIGFGCRGSTRLFENNKSAINLSKGSGAQCRTKHVGMRWHGIREWIREGILALKYVQTGDQLADI 170
            R F+YL    D  + F GK     L G+VD DWA D+ DR+S +GY F L GGA+SW S++Q      STEA+Y+A   A  E  +L   LG IG  C+ +T L  +N+SA+ +++      RTKH+ +R+H +RE +  G + L+YV TGDQ+AD+
Sbjct:  960 RAFKYLRGTADYQLVFDGKKPWE-LTGYVDADWAGDVNDRRSISGYTFLLAGGAVSWSSKKQNTTALSSTEAEYIAAAHAAKEATWLRTFLGEIGRPCKTATLLLMDNQSAMAIARNPAFHARTKHIDVRYHFLREKVEAGAINLQYVPTGDQVADV 1115          
BLAST of mRNA_H-paniculata_contig39915.10341.1 vs. uniprot
Match: A0A1J3D358_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3D358_NOCCA)

HSP 1 Score: 138 bits (347), Expect = 1.990e-35
Identity = 74/171 (43.27%), Postives = 103/171 (60.23%), Query Frame = 0
Query:    1 MEDPCREDFSTCKRIFRYLSTVPDLGIAFGGKSNGH-GLEGFVDGDWAEDIKDRKSTTGYVFKLRGGAISWCSREQQIVTWPSTEAKYVAGGEAGDETVYLGELLGSIGFGCRGSTRLFENNKSAINLSKGSGAQCRTKHVGMRWHGIREWIREGILALKYVQTGDQLADI 170
            M +P     +T KRI RYL    D GI +  +  G   L G+ D D+A DI D KST+GYVF L GGA++W SR+Q IVT  STEA+YVA      + +++  +LG IGF       LF +N S I LSK +    ++KH+ +R+H +RE  +EG++ L +  T +QLADI
Sbjct:  298 MANPTELHLATAKRIMRYLKGTLDFGIWYRRERKGSLSLLGYTDSDYAGDIDDCKSTSGYVFLLSGGAVAWSSRKQPIVTLSSTEAEYVAAATCACQAIWMKRVLGEIGFEQEDGMTLFCDNTSTIKLSKNAVMHGKSKHIRVRYHFLRELSKEGLVTLVHCNTEEQLADI 468          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig39915.10341.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4S4L116_9AGAM1.830e-3742.51Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A090C2V0_HYAAE6.740e-3741.42RxLR effector candidate protein (Fragment) n=3 Tax... [more]
UPI0006A737CF8.680e-3743.60uncharacterized mitochondrial protein AtMg00810-li... [more]
A0A6D2JBX5_9BRAS1.170e-3642.35Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1Y1N3K4_PHOPY1.620e-3643.83Uncharacterized protein n=2 Tax=Photinus pyralis T... [more]
UPI001AAD17B14.620e-3641.28secreted RxLR effector protein 161-like n=2 Tax=Ra... [more]
Q9C7Y1_ARATH8.320e-3644.77Copia-type polyprotein, putative; 28768-32772 n=3 ... [more]
A0A2I0ANN3_9ASPA1.090e-3543.02Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y9ZY34_9AGAM1.520e-3542.68Integrase catalytic domain-containing protein n=1 ... [more]
A0A1J3D358_NOCCA1.990e-3543.27Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..153
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 1..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig39915contigH-paniculata_contig39915:1181..1693 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig39915.10341.1mRNA_H-paniculata_contig39915.10341.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig39915 1168..1866 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig39915.10341.1 ID=prot_H-paniculata_contig39915.10341.1|Name=mRNA_H-paniculata_contig39915.10341.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=171bp
MEDPCREDFSTCKRIFRYLSTVPDLGIAFGGKSNGHGLEGFVDGDWAEDI
KDRKSTTGYVFKLRGGAISWCSREQQIVTWPSTEAKYVAGGEAGDETVYL
GELLGSIGFGCRGSTRLFENNKSAINLSKGSGAQCRTKHVGMRWHGIREW
IREGILALKYVQTGDQLADI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like