mRNA_H-paniculata_contig39915.10341.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig39915.10341.1
Unique NamemRNA_H-paniculata_contig39915.10341.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig39915.10341.1 vs. uniprot
Match: A0A090C2V0_HYAAE (RxLR effector candidate protein (Fragment) n=3 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=A0A090C2V0_HYAAE)

HSP 1 Score: 151 bits (382), Expect = 2.250e-41
Identity = 78/186 (41.94%), Postives = 115/186 (61.83%), Query Frame = 2
Query:   20 DPCREDFSTCKRIFRYLSTVPDLGIAFGGKSNGHGLEGFVDGDWAEDIKDRKSTTGYVFKLRGGAISWCSREQQIVTWPSTEAKYVAGGEAGDETVYLGELLGSIG-FGCRGSTRLFENNKSAINLSKGSGAQCRTKHVGMRWHGIREWIREGILALKYVQTGDQLADI*TKGLSRVQFQRLRNLL 574
            DPC   +   KR+ RYL   P+ G+ F  +  G  + G+ D DWA DI+ R+ST+GYVF + GG ISW S++Q+ V   STEA+Y+A  EA  E V+L   LG +G      + ++FE+N+ +I L+K      RTKH+ +R+H +RE +  G + L+Y  T D LAD+ TK ++ VQF+ LR+ L
Sbjct:   68 DPCPTHWQALKRVLRYLQATPNHGLEFT-REEGSRICGYTDADWAGDIESRRSTSGYVFMMNGGCISWKSQKQRTVALSSTEAEYMALSEATKEAVWLKVFLGELGEMTSDEAIKMFEDNQGSIALAKNPEFHKRTKHIDIRYHFVREKVESGEVILEYCSTQDMLADMMTKPIAAVQFESLRDRL 252          
BLAST of mRNA_H-paniculata_contig39915.10341.1 vs. uniprot
Match: A0A6D2JBX5_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JBX5_9BRAS)

HSP 1 Score: 151 bits (381), Expect = 2.520e-40
Identity = 79/191 (41.36%), Postives = 115/191 (60.21%), Query Frame = 2
Query:   14 MEDPCREDFSTCKRIFRYLSTVPDLGIAFGGKSNGHGLEGFVDGDWAEDIKDRKSTTGYVFKLRGGAISWCSREQQIVTWPSTEAKYVAGGEAGDETVYLGELLGSIGFGCRGSTRLFENNKSAINLSKGSGAQCRTKHVGMRWHGIREWIREGILALKYVQTGDQLADI*TKGLSRVQFQRLRNLLM*CY 586
            ME+P  +     KRI RY+      GI +  +  G  L GFVD D+A D+ DRKST+GYVF L GGA+SW S++Q IVT  +TEA++VA      + ++L  +LG IG+     T LF +N S I LSK      R+KH+ +R++ +R+ + E ++ LK+  T DQL+DI TK +    F+RLR  +  C+
Sbjct:  184 MENPNEQHLLAAKRILRYVQGTCGFGIRYK-QGEGEKLVGFVDSDYAGDVDDRKSTSGYVFMLGGGAVSWASKKQPIVTLSTTEAEFVAAAYGACQAMWLRNILGEIGWAQEEGTTLFCDNSSTIKLSKNPVLHGRSKHIHVRYYFLRDLVNEEVILLKFCGTEDQLSDIMTKAVKLEVFERLRRRMEVCF 373          
BLAST of mRNA_H-paniculata_contig39915.10341.1 vs. uniprot
Match: A0A182G3D4_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182G3D4_AEDAL)

HSP 1 Score: 146 bits (369), Expect = 2.610e-40
Identity = 74/181 (40.88%), Postives = 110/181 (60.77%), Query Frame = 2
Query:   32 EDFSTCKRIFRYLSTVPDLGIAFGGKSNGHGLEGFVDGDWAEDIKDRKSTTGYVFKLRGGAISWCSREQQIVTWPSTEAKYVAGGEAGDETVYLGELLGSIGFGCRGSTRLFENNKSAINLSKGSGAQCRTKHVGMRWHGIREWIREGILALKYVQTGDQLADI*TKGLSRVQFQRLRNLL 574
            E +S  KR+ RY+    D+ + +    +   LEGF D DWA DI DRKS +GYVFK+RG  +SWC+R+Q  V   S EA+Y +   A  E ++L  LL  +G      T + E+N++ I +++      R KHV +R+H ++  I  G + L YV + DQ+AD+ TKGL R+QF++LRN+L
Sbjct:   28 EHYSHLKRVLRYIQGTLDMKLVYRRDQDATLLEGFADADWAGDIVDRKSLSGYVFKVRGATVSWCTRKQVSVALSSAEAEYASLTMAVTEAIWLRGLLRDLGQRVADPTIIHEDNQACIRVAESDKPTRRMKHVDVRFHFVKNEIDAGTVRLLYVPSEDQVADVMTKGLPRIQFEKLRNML 208          
BLAST of mRNA_H-paniculata_contig39915.10341.1 vs. uniprot
Match: A0A1Y1N3K4_PHOPY (Uncharacterized protein n=2 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1N3K4_PHOPY)

HSP 1 Score: 147 bits (372), Expect = 2.880e-40
Identity = 79/179 (44.13%), Postives = 110/179 (61.45%), Query Frame = 2
Query:   38 FSTCKRIFRYLSTVPDLGIAFGGKSNGHGLEGFVDGDWAEDIKDRKSTTGYVFKLRGGAISWCSREQQIVTWPSTEAKYVAGGEAGDETVYLGELLGSIGFGCRGSTRLFENNKSAINLSKGSGAQCRTKHVGMRWHGIREWIREGILALKYVQTGDQLADI*TKGLSRVQFQRLRNLL 574
            ++  KRI RYL    DLGI +    +   + GF D D+A D+  RKSTTGYVF +  GAI+WCSR QQ  +  +TEA+YVA  EA  E ++L  LL  I      + +L+ +N+SAI L K      RTKH+ +R+H I+E  + G + ++YV++ DQLADI TK L  V+F +LR  L
Sbjct:   74 WNAVKRIMRYLKHTKDLGIRY--TFSDEPVHGFSDSDYASDVDTRKSTTGYVFNMANGAITWCSRRQQTTSVSTTEAEYVAAAEATKEAIWLRHLLSEISGKSIENVQLYVDNQSAIKLVKNPIFHKRTKHIDVRYHFIKEKFQNGDIKIEYVRSEDQLADILTKPLVSVKFNKLRTKL 250          
BLAST of mRNA_H-paniculata_contig39915.10341.1 vs. uniprot
Match: A0A2I0AK16_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0AK16_9ASPA)

HSP 1 Score: 145 bits (367), Expect = 3.580e-40
Identity = 82/195 (42.05%), Postives = 118/195 (60.51%), Query Frame = 2
Query:   14 MEDPCREDFSTCKRIFRYLSTVPDLGIAF--GGKSNGHGLEGFVDGDWAEDIKDRKSTTGYVFKLRGGAISWCSREQQIVTWPSTEAKYVAGGEAGDETVYLGELLGSIGFGCRGSTRLFENNKSAINLSKGSGAQCRTKHVGMRWHGIREWIREGILALKYVQTGDQLADI*TKGLSRVQFQRLRNLLM*CYFT 592
            ME+P        KRIFRYL    D GI +  GG S+   L GF D D+A DI DRKST+G+VF +  GA+SW S++Q IVT  +TEA++VA      + ++L ++L  + F   G+T +F +N SAI LSK      R+KH+ ++++ +R+    G + L Y ++ DQ+ADI TK L  V F +LR LL  C +T
Sbjct:    1 MENPTEVHLLAAKRIFRYLKGTTDFGIFYKNGGDSS---LIGFSDNDYAGDIDDRKSTSGFVFMMCSGAVSWSSKKQPIVTLSTTEAEFVAATACACQAIWLRKVLKILQFKQVGATTIFCDNNSAIKLSKNPVLHGRSKHIDVKYYFLRDLSNNGTIKLVYCRSEDQVADIQTKPLKLVTFAKLRGLLGVCSYT 192          
BLAST of mRNA_H-paniculata_contig39915.10341.1 vs. uniprot
Match: A0A2I0ANN3_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0ANN3_9ASPA)

HSP 1 Score: 145 bits (365), Expect = 6.370e-40
Identity = 84/197 (42.64%), Postives = 116/197 (58.88%), Query Frame = 2
Query:   14 MEDPCREDFSTCKRIFRYLSTVPDLGIAF--GGKSNGHGLEGFVDGDWAEDIKDRKSTTGYVFKLRGGAISWCSREQQIVTWPSTEAKYVAGGEAGDETVYLGELLGSIGFGCRGSTRLFENNKSAINLSKGSGAQCRTKHVGMRWHGIREWIREGILALKYVQTGDQLADI*TKGLSRVQFQRLRNLLM*CYFTVL 598
            ME P        KRIFRYL    D G+ +  G KS+   L GF D D+A D+ DRKST+GYVF +  GAISW SR+Q IVT  +TEA++VA      + ++L  +L  I F   GST ++ +N SAI LSK      R+KH+ +++H +R+  R G + L Y ++ DQ+AD+ TK L +  F +LR  L  C  T L
Sbjct:    1 MECPKEVHLMAAKRIFRYLQGTIDYGLLYKKGEKSD---LIGFTDSDYAGDLDDRKSTSGYVFFMGSGAISWSSRKQSIVTLSTTEAEFVAASACVCQAIWLRNILEEIHFKQEGSTLIYCDNISAIKLSKNPVLHGRSKHIDIKYHFLRDLTRNGTIDLIYCKSEDQVADLFTKALKQAAFLKLRKALGICSSTSL 194          
BLAST of mRNA_H-paniculata_contig39915.10341.1 vs. uniprot
Match: A0A1J3D358_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3D358_NOCCA)

HSP 1 Score: 150 bits (379), Expect = 3.880e-39
Identity = 81/186 (43.55%), Postives = 111/186 (59.68%), Query Frame = 2
Query:   14 MEDPCREDFSTCKRIFRYLSTVPDLGIAFGGKSNGH-GLEGFVDGDWAEDIKDRKSTTGYVFKLRGGAISWCSREQQIVTWPSTEAKYVAGGEAGDETVYLGELLGSIGFGCRGSTRLFENNKSAINLSKGSGAQCRTKHVGMRWHGIREWIREGILALKYVQTGDQLADI*TKGLSRVQFQRLRN 568
            M +P     +T KRI RYL    D GI +  +  G   L G+ D D+A DI D KST+GYVF L GGA++W SR+Q IVT  STEA+YVA      + +++  +LG IGF       LF +N S I LSK +    ++KH+ +R+H +RE  +EG++ L +  T +QLADI TK L    FQR+R 
Sbjct:  298 MANPTELHLATAKRIMRYLKGTLDFGIWYRRERKGSLSLLGYTDSDYAGDIDDCKSTSGYVFLLSGGAVAWSSRKQPIVTLSSTEAEYVAAATCACQAIWMKRVLGEIGFEQEDGMTLFCDNTSTIKLSKNAVMHGKSKHIRVRYHFLRELSKEGLVTLVHCNTEEQLADIMTKPLKMASFQRIRE 483          
BLAST of mRNA_H-paniculata_contig39915.10341.1 vs. uniprot
Match: UPI0009AB427F (uncharacterized protein LOC109950541 n=1 Tax=Prunus persica TaxID=3760 RepID=UPI0009AB427F)

HSP 1 Score: 146 bits (369), Expect = 5.450e-39
Identity = 76/192 (39.58%), Postives = 119/192 (61.98%), Query Frame = 2
Query:   14 MEDPCREDFSTCKRIFRYLSTVPDLGIAFGGKSNGHGLEGFVDGDWAEDIKDRKSTTGYVFKLRGGAISWCSREQQIVTWPSTEAKYVAGGEAGDETVYLGELLGSIGFGCRGSTRLFENNKSAINLSKGSGAQCRTKHVGMRWHGIREWIREGILALKYVQTGDQLADI*TKGLSRVQFQRLRNLLM*CYF 589
            ME P     +  KRI RY+    D G+ F  + +G G  G+ D D+A DI DRKST+G++F L  GAISW S++QQIVT  STEA+YVA   +  + ++L ++   +G   +G T ++ +N S I LS+      R+KH+ +R+H +R+   +  + L+Y ++G+Q+ADI TK L +  F++LR++L  C F
Sbjct:  128 MEKPTEMHLNAAKRILRYVKGTIDYGV-FYKREDGSGFVGYTDSDYAGDIDDRKSTSGHIFLLNSGAISWSSKKQQIVTLSSTEAEYVAAAASSCQAMWLRKIFEVLGNVQKGPTTIYCDNISTIKLSRNPVMHGRSKHIDVRFHFLRDLCSDEKIVLEYCKSGEQVADILTKPLKQPAFEKLRSMLGVCSF 318          
BLAST of mRNA_H-paniculata_contig39915.10341.1 vs. uniprot
Match: UPI0006A737CF (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=UPI0006A737CF)

HSP 1 Score: 146 bits (368), Expect = 1.050e-38
Identity = 80/186 (43.01%), Postives = 111/186 (59.68%), Query Frame = 2
Query:   14 MEDPCREDFSTCKRIFRYLSTVPDLGIAF--GGKSNGHGLEGFVDGDWAEDIKDRKSTTGYVFKLRGGAISWCSREQQIVTWPSTEAKYVAGGEAGDETVYLGELLGSIGFGCRGSTRLFENNKSAINLSKGSGAQCRTKHVGMRWHGIREWIREGILALKYVQTGDQLADI*TKGLSRVQFQRLR 565
            ME+P  E     K I RY+      GI +  GG+     L G+VD D+A D  DRKST+G+ F   GGA+SW S++Q IVT  +TEA+YVA      + V++  +L  IGFG    T LF +N SAI LSK      R+KH+ +R+H +RE + EGI++ +Y  T +QLADI TK +    F++LR
Sbjct:  152 MENPREEHMMAVKHIMRYVKGTAGFGIQYLCGGEEK---LVGYVDSDYAGDEDDRKSTSGFTFMFGGGAVSWSSKKQPIVTLSTTEAEYVAAANGACQAVWMRNMLTEIGFGQGDGTVLFCDNSSAIKLSKNLVLHGRSKHIHVRFHFLRELVNEGIISTEYCSTHEQLADIMTKPVKLEVFEKLR 334          
BLAST of mRNA_H-paniculata_contig39915.10341.1 vs. uniprot
Match: A0A151SR20_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151SR20_CAJCA)

HSP 1 Score: 145 bits (365), Expect = 1.190e-38
Identity = 77/190 (40.53%), Postives = 116/190 (61.05%), Query Frame = 2
Query:   14 MEDPCREDFSTCKRIFRYLSTVPDLGIAFGGKSNGHGLEGFVDGDWAEDIKDRKSTTGYVFKLRGGAISWCSREQQIVTWPSTEAKYVAGGEAGDETVYLGELLGSIGFGCRGSTRLFENNKSAINLSKGSGAQCRTKHVGMRWHGIREWIREGILALKYVQTGDQLADI*TKGLSRVQFQRLRNLLM*C 583
            ME P        KR+FRYL    DLG+ F  K NG  L GF D ++A D+ DR+ST+G+VF +  GAISW S++QQ+VT  +TEA+++A   +  + ++L  +L  + F  +G T +  +N S I LS+      R+KH+ +R+H +R+ + E I+ L Y ++ DQ+ADI TK L    F++LR LL  C
Sbjct:  111 MERPTELHLKAAKRVFRYLKGTTDLGV-FYKKINGSILTGFTDSNYAGDMDDRRSTSGHVFMIGSGAISWASKKQQVVTLSTTEAEFIAAATSACQAIWLRRILEELHFYQQGPTVIHCDNSSTIKLSRNPILHGRSKHIDVRYHFLRDLVIEKIIDLVYCRSEDQVADILTKPLKLEAFEKLRGLLGIC 299          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig39915.10341.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A090C2V0_HYAAE2.250e-4141.94RxLR effector candidate protein (Fragment) n=3 Tax... [more]
A0A6D2JBX5_9BRAS2.520e-4041.36Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A182G3D4_AEDAL2.610e-4040.88Uncharacterized protein n=1 Tax=Aedes albopictus T... [more]
A0A1Y1N3K4_PHOPY2.880e-4044.13Uncharacterized protein n=2 Tax=Photinus pyralis T... [more]
A0A2I0AK16_9ASPA3.580e-4042.05Retrovirus-related Pol polyprotein from transposon... [more]
A0A2I0ANN3_9ASPA6.370e-4042.64Retrovirus-related Pol polyprotein from transposon... [more]
A0A1J3D358_NOCCA3.880e-3943.55Retrovirus-related Pol polyprotein from transposon... [more]
UPI0009AB427F5.450e-3939.58uncharacterized protein LOC109950541 n=1 Tax=Prunu... [more]
UPI0006A737CF1.050e-3843.01uncharacterized mitochondrial protein AtMg00810-li... [more]
A0A151SR20_CAJCA1.190e-3840.53Retrovirus-related Pol polyprotein from transposon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig39915contigH-paniculata_contig39915:1168..1866 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score136.0
Seed ortholog evalue1.7e-29
Seed eggNOG ortholog67593.Physo127720
Hectar predicted targeting categoryother localisation
EggNOG free text desc.gag-polypeptide of LTR copia-type
EggNOG OGs3QHJF@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons1
Model size699
Cds size513
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig39915.10341.1prot_H-paniculata_contig39915.10341.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig39915 1181..1693 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930220.6626225-UTR-H-paniculata_contig39915:1167..11801622930220.6626225-UTR-H-paniculata_contig39915:1167..1180Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig39915 1168..1180 +
1691481196.9837189-UTR-H-paniculata_contig39915:1167..11801691481196.9837189-UTR-H-paniculata_contig39915:1167..1180Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig39915 1168..1180 +
1622930220.685747-UTR-H-paniculata_contig39915:1693..18661622930220.685747-UTR-H-paniculata_contig39915:1693..1866Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig39915 1694..1866 +
1691481197.0102873-UTR-H-paniculata_contig39915:1693..18661691481197.0102873-UTR-H-paniculata_contig39915:1693..1866Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig39915 1694..1866 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930220.6758459-CDS-H-paniculata_contig39915:1180..16931622930220.6758459-CDS-H-paniculata_contig39915:1180..1693Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig39915 1181..1693 +
1691481196.9986713-CDS-H-paniculata_contig39915:1180..16931691481196.9986713-CDS-H-paniculata_contig39915:1180..1693Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig39915 1181..1693 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig39915.10341.1

>prot_H-paniculata_contig39915.10341.1 ID=prot_H-paniculata_contig39915.10341.1|Name=mRNA_H-paniculata_contig39915.10341.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=171bp
MEDPCREDFSTCKRIFRYLSTVPDLGIAFGGKSNGHGLEGFVDGDWAEDI
KDRKSTTGYVFKLRGGAISWCSREQQIVTWPSTEAKYVAGGEAGDETVYL
GELLGSIGFGCRGSTRLFENNKSAINLSKGSGAQCRTKHVGMRWHGIREW
IREGILALKYVQTGDQLADI*
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mRNA from alignment at H-paniculata_contig39915:1168..1866+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig39915.10341.1 ID=mRNA_H-paniculata_contig39915.10341.1|Name=mRNA_H-paniculata_contig39915.10341.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=699bp|location=Sequence derived from alignment at H-paniculata_contig39915:1168..1866+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCAGCACATCGTATGGAGGACCCATGTCGGGAAGACTTCAGTACATGCA AGCGCATTTTTCGTTATCTCAGTACTGTGCCTGACCTCGGCATTGCGTTC GGCGGTAAGAGTAATGGTCACGGTCTGGAAGGATTCGTTGATGGCGATTG GGCGGAAGATATCAAGGACCGAAAGTCCACAACAGGATACGTTTTCAAGC TGAGAGGTGGTGCGATAAGTTGGTGCTCTAGGGAGCAACAGATAGTCACG TGGCCCAGTACAGAGGCAAAGTACGTTGCTGGAGGAGAAGCGGGAGATGA GACGGTATATCTTGGGGAGTTACTAGGATCGATAGGTTTCGGATGCAGGG GGAGCACGAGACTGTTTGAGAACAATAAATCAGCTATTAATCTCAGTAAG GGATCTGGCGCACAGTGCAGGACAAAGCACGTCGGAATGCGCTGGCACGG AATTCGAGAGTGGATTCGGGAAGGAATATTGGCATTGAAATACGTGCAGA CCGGCGATCAACTTGCTGACATTTGAACGAAAGGACTAAGCAGAGTACAG TTCCAGAGACTGAGAAATTTGCTCATGTGATGTTATTTTACAGTATTATG GAAGAAAAGGTCGTCGTTGATAGTTTTGGGGTGAGCAACGAAGTTATGGT GAGCAATTTTTGTGGTCCCGTTGGATGTAGACGTTGTAATATTGAGGGG
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Coding sequence (CDS) from alignment at H-paniculata_contig39915:1168..1866+

>mRNA_H-paniculata_contig39915.10341.1 ID=mRNA_H-paniculata_contig39915.10341.1|Name=mRNA_H-paniculata_contig39915.10341.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1026bp|location=Sequence derived from alignment at H-paniculata_contig39915:1168..1866+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGGACCCATGTCGGGAAGACTTCAGTACATGCAAGCGCATTTTTCG
TTATCTCAGTACTGTGCCTGACCTCGGCATTGCGTTCGGCGGTAAGAGTA
ATGGTCACGGTCTGGAAGGATTCGTTGATGGCGATTGGGCGGAAGATATC
AAGGACCGAAAGTCCACAACAGGATACGTTTTCAAGCTGAGAGGTGGTGC
GATAAGTTGGTGCTCTAGGGAGCAACAGATAGTCACGTGGCCCAGTACAG
AGGCAAAGTACGTTGCTGGAGGAGAAGCGGGAGATGAGACGGTATATCTT
GGGGAGTTACTAGGATCGATAGGTTTCGGATGCAGGGGGAGCACGAGACT
GTTTGAGAACAATAAATCAGCTATTAATCTCAGTAAGGGATCTGGCGCAC
AGTGCAGGACAAAGCACGTCGGAATGCGCTGGCACGGAATTCGAGAGTGG
ATTCGGGAAGGAATATTGGCATTGAAATACGTGCAGACCGGCGATCAACT
TGCTGACATTTGAATGGAGGACCCATGTCGGGAAGACTTCAGTACATGCA
AGCGCATTTTTCGTTATCTCAGTACTGTGCCTGACCTCGGCATTGCGTTC
GGCGGTAAGAGTAATGGTCACGGTCTGGAAGGATTCGTTGATGGCGATTG
GGCGGAAGATATCAAGGACCGAAAGTCCACAACAGGATACGTTTTCAAGC
TGAGAGGTGGTGCGATAAGTTGGTGCTCTAGGGAGCAACAGATAGTCACG
TGGCCCAGTACAGAGGCAAAGTACGTTGCTGGAGGAGAAGCGGGAGATGA
GACGGTATATCTTGGGGAGTTACTAGGATCGATAGGTTTCGGATGCAGGG
GGAGCACGAGACTGTTTGAGAACAATAAATCAGCTATTAATCTCAGTAAG
GGATCTGGCGCACAGTGCAGGACAAAGCACGTCGGAATGCGCTGGCACGG
AATTCGAGAGTGGATTCGGGAAGGAATATTGGCATTGAAATACGTGCAGA
CCGGCGATCAACTTGCTGACATTTGA
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