prot_H-paniculata_contig39879.10333.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig39879.10333.1
Unique Nameprot_H-paniculata_contig39879.10333.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length147
Homology
BLAST of mRNA_H-paniculata_contig39879.10333.1 vs. uniprot
Match: UPI00053F994C (uncharacterized protein LOC104908802 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F994C)

HSP 1 Score: 52.0 bits (123), Expect = 3.650e-5
Identity = 24/48 (50.00%), Postives = 34/48 (70.83%), Query Frame = 0
Query:   72 WMSDSGASNHMTNDLSKMYDLRKPVAGEDVVMLGDGSTLVVDLVGKLD 119
            W+ DSGA++H+TNDLS +  L  P  G D +++GDGSTL +  +G LD
Sbjct:  169 WLMDSGATHHITNDLSNLA-LHAPYDGSDDLIIGDGSTLPISHIGSLD 215          
BLAST of mRNA_H-paniculata_contig39879.10333.1 vs. uniprot
Match: A0A5N6LS31_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LS31_9ASTR)

HSP 1 Score: 52.4 bits (124), Expect = 3.850e-5
Identity = 25/53 (47.17%), Postives = 37/53 (69.81%), Query Frame = 0
Query:   72 WMSDSGASNHMTNDLSKMYDLRKPVAGEDVVMLGDGSTLVVDLVGKLDLIFHS 124
            W+ DSGAS+H+TNDLS +  L  P  G + +++GDGS+L +  +G L L F+S
Sbjct:  159 WLFDSGASHHITNDLSAL-SLHAPYDGTEELVIGDGSSLKITHIGSLSLTFNS 210          
BLAST of mRNA_H-paniculata_contig39879.10333.1 vs. uniprot
Match: A0A6D2JUM8_9BRAS (Integrase catalytic domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JUM8_9BRAS)

HSP 1 Score: 52.4 bits (124), Expect = 4.460e-5
Identity = 36/93 (38.71%), Postives = 50/93 (53.76%), Query Frame = 0
Query:   56 PVALTNQNPTINNGNMWMSDSGASNHMTNDLSKMYDLRKPVAGEDVVMLGDGSTLVVDLVGKLDLIFHSTTDVPATL-EVSYLPELNFNLFSL 147
            P A     PT N  N W+ DSGA++H+T DLS +  L +P  G + V + DG+ L +   G   L    T   P TL +V Y+P+L  NL S+
Sbjct:  100 PRANLASTPTYN-ANNWVMDSGATHHLTTDLSNL-SLHQPYLGGEEVTIADGTNLHISHTGSSQL---PTLSKPLTLTDVLYVPDLKKNLISV 187          
BLAST of mRNA_H-paniculata_contig39879.10333.1 vs. uniprot
Match: A0A6D2KMT9_9BRAS (Integrase catalytic domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KMT9_9BRAS)

HSP 1 Score: 52.4 bits (124), Expect = 5.130e-5
Identity = 36/93 (38.71%), Postives = 50/93 (53.76%), Query Frame = 0
Query:   56 PVALTNQNPTINNGNMWMSDSGASNHMTNDLSKMYDLRKPVAGEDVVMLGDGSTLVVDLVGKLDLIFHSTTDVPATL-EVSYLPELNFNLFSL 147
            P A     PT N  N W+ DSGA++H+T DLS +  L +P  G + V + DG+ L +   G   L    T   P TL +V Y+P+L  NL S+
Sbjct:  318 PRANLASTPTYN-ANNWVMDSGATHHLTTDLSNL-SLHQPYLGGEEVTIADGTNLHISHTGSSQL---PTLSKPLTLTDVLYVPDLKKNLISV 405          
BLAST of mRNA_H-paniculata_contig39879.10333.1 vs. uniprot
Match: A0A834W4R7_9FABA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834W4R7_9FABA)

HSP 1 Score: 51.2 bits (121), Expect = 7.550e-5
Identity = 27/76 (35.53%), Postives = 49/76 (64.47%), Query Frame = 0
Query:   72 WMSDSGASNHMTNDLSKMYDLRKPVAGEDVVMLGDGSTLVVDLVGKLDLIFHSTTDVPATLEVSYLPELNFNLFSL 147
            W +DSGA+NH+TNDLS +  +++P  G + V + +GS L +  +G  +LI +S T      ++ ++P+++ NL S+
Sbjct:   64 WFADSGATNHLTNDLSNLQ-VKQPYDGGEQVHIANGSGLAITHIGNSELISNSKTF--RLNQILHVPDVSKNLLSI 136          
BLAST of mRNA_H-paniculata_contig39879.10333.1 vs. uniprot
Match: A0A151SCF9_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151SCF9_CAJCA)

HSP 1 Score: 51.2 bits (121), Expect = 8.530e-5
Identity = 25/77 (32.47%), Postives = 46/77 (59.74%), Query Frame = 0
Query:   71 MWMSDSGASNHMTNDLSKMYDLRKPVAGEDVVMLGDGSTLVVDLVGKLDLIFHSTTDVPATLEVSYLPELNFNLFSL 147
            MW  DSGASNH+TND+S +   ++   G+  V++GDG++L++  +G   +    +    +   + Y+P ++ NL S+
Sbjct:   13 MWYPDSGASNHLTNDISYL-STKQEYQGKQRVLVGDGNSLLISHIGHSKMHTAQSNITFSLPNIMYIPNISKNLLSI 88          
BLAST of mRNA_H-paniculata_contig39879.10333.1 vs. uniprot
Match: A5BQA4_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5BQA4_VITVI)

HSP 1 Score: 51.6 bits (122), Expect = 9.060e-5
Identity = 28/68 (41.18%), Postives = 40/68 (58.82%), Query Frame = 0
Query:   59 LTNQNPTINNGNMWMSDSGASNHMTNDLSKMYDLRKPVAGEDVVMLGDGSTLVVDLVGKLDLIFHSTT 126
            +TN +PT      W+ DSGAS+H+T DLS +  L  P  G D +M+GDGS+L +   G      H+T+
Sbjct:   15 VTNTSPTTP---QWLLDSGASHHVTADLSNL-SLHTPYTGFDDIMIGDGSSLPITHTGSTSFTTHNTS 78          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig39879.10333.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
UPI00053F994C3.650e-550.00uncharacterized protein LOC104908802 n=1 Tax=Beta ... [more]
A0A5N6LS31_9ASTR3.850e-547.17Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
A0A6D2JUM8_9BRAS4.460e-538.71Integrase catalytic domain-containing protein n=1 ... [more]
A0A6D2KMT9_9BRAS5.130e-538.71Integrase catalytic domain-containing protein n=1 ... [more]
A0A834W4R7_9FABA7.550e-535.53Retrovirus-related Pol polyprotein from transposon... [more]
A0A151SCF9_CAJCA8.530e-532.47Retrovirus-related Pol polyprotein from transposon... [more]
A5BQA4_VITVI9.060e-541.18Uncharacterized protein n=1 Tax=Vitis vinifera Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig39879contigH-paniculata_contig39879:1456..1896 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig39879.10333.1mRNA_H-paniculata_contig39879.10333.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig39879 1426..1896 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig39879.10333.1 ID=prot_H-paniculata_contig39879.10333.1|Name=mRNA_H-paniculata_contig39879.10333.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=147bp
MGNDVQDHGNVGVEINETETKTGISNVLHKNCFSSTVDLIDVDKLDDTED
GECGLPVALTNQNPTINNGNMWMSDSGASNHMTNDLSKMYDLRKPVAGED
VVMLGDGSTLVVDLVGKLDLIFHSTTDVPATLEVSYLPELNFNLFSL
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