prot_H-paniculata_contig3969.10295.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3969.10295.1
Unique Nameprot_H-paniculata_contig3969.10295.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length333
Homology
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BLAST of mRNA_H-paniculata_contig3969.10295.1 vs. uniprot
Match: D8LTT2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTT2_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 1.070e-30
Identity = 96/159 (60.38%), Postives = 112/159 (70.44%), Query Frame = 0 
Query:  173 GEAFRSRVADADKLISKREEQSVLVRQLERELASTVSALRDERRERRGQTETLXXXXXXXXXXXXXXXXXXXXXXXMARTLMGELEALQSRCERLVALREEQSQEADKTTSRLKEDNRELEARVRXXXXXXXXXXTAREGVGSERERVTRDLGVAIAAV 331
            G+AFRS  + A+KL++KREEQSVLV+QLERELASTVSAL+DERRERRGQTETL                       M  TLMGELEALQSRC+RLVA REE+++EADKT +RL+EDNRELEAR+R XXXXXXXXX            + RDL  A+A V
Sbjct:  509 GDAFRS-ASWAEKLVTKREEQSVLVKQLERELASTVSALKDERRERRGQTETLRRKLEETRATVGDREAELQRRERMTTTLMGELEALQSRCDRLVASREERAEEADKTMARLREDNRELEARLRQXXXXXXXXXXXXXXXXXXXXXMERDLHSALAKV 666
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BLAST of mRNA_H-paniculata_contig3969.10295.1 vs. uniprot
Match: A0A6H5KDC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDC5_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 1.720e-26
Identity = 89/176 (50.57%), Postives = 105/176 (59.66%), Query Frame = 0 
Query:  162 VRGAGSEQHLFGEAFR-------SRVADADKLISKREEQSVLVRQLERELASTVSALRDERRERRGQTETLXXXXXXXXXXXXXXXXXXXXXXXMARTLMGELEALQSRCERLVALREEQSQEADKTTSRLKE-DNRELEARVRXXXXXXXXXXTAREGVGSERERVTRDLGVAIA 329
            V G+    HL G A         S  + A KL++KREEQSVLV+QLERELASTVSAL+DERRERRGQTETL                       M  TLMGELEALQSRC+RLVA REE+++EADKT +RL+E D    EAR            +AR G  +ER R+ RDL  A+A
Sbjct:  481 VGGSSGSYHLGGRAAAGEGGGAFSSASWAAKLVTKREEQSVLVKQLERELASTVSALKDERRERRGQTETLRRKLEETRAAVGYREAELQRRERMTTTLMGELEALQSRCDRLVASREERAEEADKTMARLREADAAAAEAR------------SARAGADAERVRMGRDLQSALA 644
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3969.10295.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTT2_ECTSI1.070e-3060.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KDC5_9PHAE1.720e-2650.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 183..217
NoneNo IPR availableCOILSCoilCoilcoord: 229..309

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3969contigH-paniculata_contig3969:7985..16326 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3969.10295.1mRNA_H-paniculata_contig3969.10295.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3969 7985..16326 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3969.10295.1 ID=prot_H-paniculata_contig3969.10295.1|Name=mRNA_H-paniculata_contig3969.10295.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=333bp
AAATPAVPVTRFPWEKEKEETAVSRDPVGSLGAPSRYRPDAPIPTSTEAS
AVAAAAAPFANRVTREHNQHKYWLGPTNTSISATAGVVISGDRSLSSESA
AYRTSADALIARVDDVSAPAPTAAVKRARSSTDVLREAGFGKGLRNKQSS
GRGLAEEGEEFVRGAGSEQHLFGEAFRSRVADADKLISKREEQSVLVRQL
ERELASTVSALRDERRERRGQTETLRGQLEDARSTVRDREAELERREAMA
RTLMGELEALQSRCERLVALREEQSQEADKTTSRLKEDNRELEARVREAE
ARAAEARTAREGVGSERERVTRDLGVAIAAVR*
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