prot_H-paniculata_contig3942.10248.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3942.10248.1
Unique Nameprot_H-paniculata_contig3942.10248.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length485
Homology
BLAST of mRNA_H-paniculata_contig3942.10248.1 vs. uniprot
Match: A0A6H5JMF4_9PHAE (Vps8 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMF4_9PHAE)

HSP 1 Score: 250 bits (638), Expect = 4.940e-69
Identity = 230/553 (41.59%), Postives = 268/553 (48.46%), Query Frame = 0
Query:    1 MVAIEMCQRASPPA-GVNAGPSASRAGAPSRQGTGAAGXXXXXXXXXXXXXXXXXXXXAAGQTAPPVSKPSEDFDDDGDLDLSASLWFQTLDKILSAKGAVSRG-----------------------EQPAGAGGGR---SXXXXXXXXXGGELPQTAAVMGGVLDALLQRTLSSMAGYVPLPVVVKKVLSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLLFESFKSVVRKRHTLKGAGVRVSSVAGRDLPTPRLPTPVKSTATTTLADPKDVPPSGGDALDTLGDGRSVGLAYGNMPSASAXXXXXXXXXXXXXAGLLEAVGMGVISVSPGGVALIEQLGRGAAPAGDLASGSIRHGEFGQSLSAPAGDRGAVADDGGESEASADRQ---------ETSTSLWRLRAARRRRKARGDKMRALVTWAAS-------GQAGDKSRVDGVGSGVPDPFARDVGRAVT----------------SGRVMESGGRSEKEANLADPAMAEAA-----------SRAGGLGVGWGVKFQAHAARAIPASFLTKR 483
            MVAIEMCQRASP + G + G  ++R  + +R  + A  XXXXXXXXXXXX                 S  ++DFDDDG+LDLSASLWFQTLDKILSAKGA  R                          PA +  G    +          GELPQTAAVMGGVLDALLQRTLSSMAGYVPLP +VKKV+SDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLLFES ++VVR+RHTLKGAGVRVS+V G DL  PR+                                RS+   +  +PS                 GLL A+G GVI VS  GVA++E LGRG                                                      + S SLWRLRAARRRR+ARGDKMR+L  W+A        G  G+++R    G+    P     G  V+                +GRV + G                                G   +GWG   QA AA A+PASFLTKR
Sbjct: 2095 MVAIEMCQRASPSSSGGSVGSMSARRASGARHRSTAGXXXXXXXXXXXXXR----------------SPLADDFDDDGELDLSASLWFQTLDKILSAKGAACRSGPXXXXXXXXXXXXXXXXXXXXXADPAASVPGXXXXAVAPGRGREAAGELPQTAAVMGGVLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLLFESLRTVVRERHTLKGAGVRVSAVGGFDLHPPRIAAXXXXXX---XXXXXXXXXXXXXXXXXXXXXRSLAPHHPPVPS-----------------GLLGALGSGVIRVSSAGVAVVEHLGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDASASLWRLRAARRRRQARGDKMRSLARWSAGEDTGPIRGDGGERAR----GTIGHIPVMTRGGSKVSGRSGXXXXXXXLGRDENGRVHQRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSRGRQPLGWGSALQARAALALPASFLTKR 2607          
BLAST of mRNA_H-paniculata_contig3942.10248.1 vs. uniprot
Match: D8LRX1_ECTSI (Vps8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRX1_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 4.550e-58
Identity = 163/382 (42.67%), Postives = 188/382 (49.21%), Query Frame = 0
Query:  134 MGGVLDALLQRTLSSMAGYVPLPVVVKKVLSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLLFESFKSVVRKRHTLKGAGVRVSSVAGRDLPTPRLPTPVKSTATTTLADPKDVPPSGGDALDTLGDGRSVGLAYGNMPSASAXXXXXXXXXXXXXAGLLEAVGMGVISVSPGGVALIEQLGRGAAPAGDLASGSIR-HGEFGQSLSAPAGDRGAVADDGGESEASADRQETSTSLWRLRAARRRRKARGDKMRALVTWAAS-------GQAGDKSR-----VDGVGSGVPDPFARDVGRAVT-------SGRVMESGGRSEKEANLADPAMAEAA------------SRAGGLGVGWGVKFQAHAARAIPASFLTKR 483
            MGGVLDALLQRTLSSMAGYVPLP +VKKV+SDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLLFES ++VVR+RHTLKGAGVRVS+V G DL  PR+      T T   +                                  XXX          +GLL AVG GVISVS GGVA++E LGRG          +                                     S SLWRLRAARRRR+A+GDKMR+L  W+A        G  GD++R     +  +  G      R+ G           +GRV + GG                                G   +GWG   QA AA A+PASFL KR
Sbjct:    1 MGGVLDALLQRTLSSMAGYVPLPAIVKKVVSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLLFESLRTVVRERHTLKGAGVRVSAVGGFDLHPPRIAAADGPTRTRNASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLALHHPPVPSGLLGAVGSGVISVSSGGVAVVEHLGRGXXXXXXXXXXNDEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASASLWRLRAARRRRQAKGDKMRSLARWSAGEDTGPTRGDGGDRARGTIGHIPVMNRGGTKVSGRNGGGVXXXXXXXDENGRVHQRGGPGXXXXXXXXXXXXXXXXXXXXXXXXXXXQSRGRQALGWGSALQARAALALPASFLAKR 382          
BLAST of mRNA_H-paniculata_contig3942.10248.1 vs. uniprot
Match: A0A7S2GX04_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GX04_9STRA)

HSP 1 Score: 100 bits (249), Expect = 8.210e-19
Identity = 49/140 (35.00%), Postives = 79/140 (56.43%), Query Frame = 0
Query:   84 SLWFQTLDKILSAKGAVSRGEQPAGAGGGRSXXXXXXXXXGGELPQTAAVMGGVLDALLQRTLSSMAGYVPLPVVVKKVLSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLLFESFKSVVRKRHTLKGAGVRVSSV 223
            +LWF  LD+++  K  +   +                     ELPQ   ++  VL  ++QRTL  M+ +VPLP +V+K+  DH+G  LGE R ++L+MLDTY+Y+T I+RTA SL+    + + ++R  LK +GV +  +
Sbjct:  394 ALWFLMLDRLVGMKSLLHLNQ---------------------ELPQHQTILEAVLTEMIQRTLDKMSAFVPLPRIVRKITDDHSGMELGELRDILLSMLDTYTYETNIYRTAVSLVATDLRRLCKRRQRLKCSGVSIRHI 512          
BLAST of mRNA_H-paniculata_contig3942.10248.1 vs. uniprot
Match: A0A836CF74_9STRA (Golgi CORVET complex core vacuolar protein 8-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF74_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 3.430e-13
Identity = 46/90 (51.11%), Postives = 57/90 (63.33%), Query Frame = 0
Query:  139 DALLQRTLSSMAGYVPLPVVVKKVLSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLLFESFKSVVRKRHTLKGAGVRVSSVAGRDL 228
            D LLQR L  M GYVPLP +V KVLSDHA + LGEF+ +I +ML   S +T ++R AA LLF   +     R  L  AGVRV ++ GR L
Sbjct: 1073 DILLQRLLEGMTGYVPLPAIVGKVLSDHAQAPLGEFKGLIQSMLVACSRETDVYRAAAVLLFGCAQRARAARRRLARAGVRVCAIDGRGL 1162          
BLAST of mRNA_H-paniculata_contig3942.10248.1 vs. uniprot
Match: A0A6P5GI92_ANACO (vacuolar protein sorting-associated protein 8 homolog n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GI92_ANACO)

HSP 1 Score: 63.5 bits (153), Expect = 7.380e-7
Identity = 43/124 (34.68%), Postives = 59/124 (47.58%), Query Frame = 0
Query:   82 SASLWFQTLD-------KILSAKGAVSR---GEQPAGAGGGRSXXXXXXXXXGGELPQTAAVMGGVLDALLQRTLSSMAGYVPLPVVVKKVLSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTA 195
            S SLWF+ LD       +    K    R   G+ PA  G   +          G   + AAV+  V    +   +  MAGY+PLPV++ KVLSD+     G+F+ +IL ML TY Y+  I  TA
Sbjct: 1567 SESLWFRLLDSFSEPLKRFCGGKDIPERSQVGKVPAICGDRVNEFKFRRLSENG---RCAAVLRRVFSQFVGEIIEGMAGYIPLPVIMTKVLSDNGDQEFGDFKLIILRMLGTYGYEKRILDTA 1687          
BLAST of mRNA_H-paniculata_contig3942.10248.1 vs. uniprot
Match: A0A0A9D9K0_ARUDO (RING-type domain-containing protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9D9K0_ARUDO)

HSP 1 Score: 60.8 bits (146), Expect = 2.230e-6
Identity = 42/139 (30.22%), Postives = 62/139 (44.60%), Query Frame = 0
Query:   78 DLDLSASLWFQTLD-----------------KILSAKGAVSRGEQPAGAGGGRSXXXXXXXXXGGELPQTAAVMGGVLDALLQRTLSSMAGYVPLPVVVKKVLSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLL 199
            D + S SLWFQ LD                 K   +KG+ +  EQP G G  +                 +  +G +++A        MAGY+PLP ++ K+LSD+     G+F+ VI  ML  Y Y+  I  TA S++
Sbjct:   26 DPEESQSLWFQLLDSFSEPLKKLYGSKDVNEKCAQSKGSETPNEQPKGKGLSQVRISAKQSCLNALRKIFSQFVGEIIEA--------MAGYIPLPAIMAKLLSDNGSQEFGDFKLVIHRMLSMYLYEKRILETAKSVI 156          
BLAST of mRNA_H-paniculata_contig3942.10248.1 vs. uniprot
Match: A0A6I9QH23_ELAGV (vacuolar protein sorting-associated protein 8 homolog isoform X1 n=8 Tax=Arecaceae TaxID=4710 RepID=A0A6I9QH23_ELAGV)

HSP 1 Score: 62.0 bits (149), Expect = 2.230e-6
Identity = 38/124 (30.65%), Postives = 58/124 (46.77%), Query Frame = 0
Query:   82 SASLWFQTLDKILSAKGAVSR------GEQPAGAGGGRSXXXXXXXXXGGELPQTAAVMGGVLDALLQRTLSSMAGYVPLPVVVKKVLSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLL 199
            S SLWF+ LD   + + + S       G +    G  +S              +   ++  V    +   +  MAG+VPLPV++ K+LSD+     G+F+  IL ML TY Y+  I  TA SL+
Sbjct: 1602 SESLWFRLLDSTTNFRSSFSEPLKRFYGNKEVSEG--QSCVGSSPAISDMGYKKCTGILRRVFSQFVGEIIEGMAGFVPLPVIMGKLLSDNGNQEFGDFKFTILKMLGTYGYERRILDTAKSLI 1723          
BLAST of mRNA_H-paniculata_contig3942.10248.1 vs. uniprot
Match: A0A388JYZ1_CHABU (Vps8 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JYZ1_CHABU)

HSP 1 Score: 61.6 bits (148), Expect = 3.100e-6
Identity = 34/99 (34.34%), Postives = 53/99 (53.54%), Query Frame = 0
Query:  134 MGGVLDALLQRTLSSMAGYVPLPVVVKKVLSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASL----LFESFKSVVRKRHTLKGAGVRVSSVAGRDL 228
            M  +L  ++ + +S M GYVPLPV++ K++S H     GEF+  IL +L TY ++ +I +TA +L     F S  ++ R R    G       V  R+L
Sbjct: 2718 MRTLLVGMMGKVMSGMVGYVPLPVLLSKIVSQHGSDQFGEFKATILGLLGTYGFERSILKTAKNLQDGDAFASMHALKRGRTQALGPKSLTCCVCKRNL 2816          
BLAST of mRNA_H-paniculata_contig3942.10248.1 vs. uniprot
Match: A0A7S4HKN1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HKN1_9EUKA)

HSP 1 Score: 57.4 bits (137), Expect = 4.870e-6
Identity = 32/77 (41.56%), Postives = 49/77 (63.64%), Query Frame = 0
Query:  126 ELPQTAAVMGGVLDALLQRTLSSMAGYVPLPVVVKKVLSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLLFES 202
            +L   AA +  V +  L + L+SM GYVPL V+++K++ DH+ +   +F+ +ILAMLDT  Y+  I   AA  LF+S
Sbjct:    8 KLSPGAAFVTRVFNDCLAKILNSMMGYVPLRVIMEKIVRDHSTAPFSDFKPMILAMLDTNHYEQNILE-AAKRLFDS 83          
BLAST of mRNA_H-paniculata_contig3942.10248.1 vs. uniprot
Match: A0A2I0AWR9_9ASPA (RING-type domain-containing protein n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0AWR9_9ASPA)

HSP 1 Score: 60.8 bits (146), Expect = 5.100e-6
Identity = 41/132 (31.06%), Postives = 58/132 (43.94%), Query Frame = 0
Query:   82 SASLWFQTLD-------KILSAKGAVSRGEQPAGAGGGRSXXXXXXXXXGGELPQT-------AAVMGGVLDALLQRTLSSMAGYVPLPVVVKKVLSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLL 199
            S SLWF+  D       +  S KG   R         G             E+P T       A ++  +   L+   +  M GY+PLP V+ K+LSD+     G+F+  IL ML TY+Y+  I  TA SL+
Sbjct: 1636 SESLWFRLFDFFSEPLKRFCSGKGFPERKNNV-----GHMTASSNASVYMDEIPSTWKFLKSSAHILRRLFSQLIGEIIEGMTGYLPLPAVMAKLLSDNGNQEFGDFKFTILKMLGTYNYERRILDTAKSLI 1762          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3942.10248.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMF4_9PHAE4.940e-6941.59Vps8 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LRX1_ECTSI4.550e-5842.67Vps8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 Rep... [more]
A0A7S2GX04_9STRA8.210e-1935.00Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A836CF74_9STRA3.430e-1351.11Golgi CORVET complex core vacuolar protein 8-domai... [more]
A0A6P5GI92_ANACO7.380e-734.68vacuolar protein sorting-associated protein 8 homo... [more]
A0A0A9D9K0_ARUDO2.230e-630.22RING-type domain-containing protein n=1 Tax=Arundo... [more]
A0A6I9QH23_ELAGV2.230e-630.65vacuolar protein sorting-associated protein 8 homo... [more]
A0A388JYZ1_CHABU3.100e-634.34Vps8 domain-containing protein n=1 Tax=Chara braun... [more]
A0A7S4HKN1_9EUKA4.870e-641.56Hypothetical protein (Fragment) n=1 Tax=Vannella s... [more]
A0A2I0AWR9_9ASPA5.100e-631.06RING-type domain-containing protein n=1 Tax=Aposta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12616VACUOLAR PROTEIN SORTING VPS41coord: 34..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3942contigH-paniculata_contig3942:12530..16002 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3942.10248.1mRNA_H-paniculata_contig3942.10248.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3942 10083..16453 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3942.10248.1 ID=prot_H-paniculata_contig3942.10248.1|Name=mRNA_H-paniculata_contig3942.10248.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=485bp
MVAIEMCQRASPPAGVNAGPSASRAGAPSRQGTGAAGGSAGRAGSAEAEA
QGRDGGKAAGQTAPPVSKPSEDFDDDGDLDLSASLWFQTLDKILSAKGAV
SRGEQPAGAGGGRSVGGGGRRRRGGELPQTAAVMGGVLDALLQRTLSSMA
GYVPLPVVVKKVLSDHAGSSLGEFRHVILAMLDTYSYDTAIHRTAASLLF
ESFKSVVRKRHTLKGAGVRVSSVAGRDLPTPRLPTPVKSTATTTLADPKD
VPPSGGDALDTLGDGRSVGLAYGNMPSASAAAAVVAFSPPPPPAGLLEAV
GMGVISVSPGGVALIEQLGRGAAPAGDLASGSIRHGEFGQSLSAPAGDRG
AVADDGGESEASADRQETSTSLWRLRAARRRRKARGDKMRALVTWAASGQ
AGDKSRVDGVGSGVPDPFARDVGRAVTSGRVMESGGRSEKEANLADPAMA
EAASRAGGLGVGWGVKFQAHAARAIPASFLTKRL*
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