prot_H-paniculata_contig39308.10223.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig39308.10223.1
Unique Nameprot_H-paniculata_contig39308.10223.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length86
Homology
BLAST of mRNA_H-paniculata_contig39308.10223.1 vs. uniprot
Match: D8LNS9_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNS9_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 1.180e-32
Identity = 59/77 (76.62%), Postives = 66/77 (85.71%), Query Frame = 0
Query:    1 APAVVCTTRTWHPNIDLHTGFVSLPILTNDWRPVLSINCVIFALQLMFLEPVEEVAVNEAATAALA-NPEVFREQVR 76
            AP VVCT+R WHPNIDLHTG VSLPILT DWRPVLSIN V+FALQLMF+EP E  AVN+ A AAL+ NP++FREQVR
Sbjct:   75 APTVVCTSRAWHPNIDLHTGLVSLPILTKDWRPVLSINTVVFALQLMFIEPTEHYAVNKPAAAALSSNPDLFREQVR 151          
BLAST of mRNA_H-paniculata_contig39308.10223.1 vs. uniprot
Match: A0A835Z4F7_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4F7_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 1.350e-21
Identity = 48/77 (62.34%), Postives = 56/77 (72.73%), Query Frame = 0
Query:    1 APAVVCTTRTWHPNIDLHTGFVSLPILTNDWRPVLSINCVIFALQLMFLEPVEEVAVNEAATAA-LANPEVFREQVR 76
            AP V  T R WHP++ L TG V LPIL  DWRPVL+I+ V+FALQLM LEP  E   N+AA AA L+ P+VFREQVR
Sbjct:   73 APRVTSTGRIWHPSVHLTTGCVRLPILEADWRPVLTIHTVVFALQLMLLEPSHEYPANDAAAAAALSTPDVFREQVR 149          
BLAST of mRNA_H-paniculata_contig39308.10223.1 vs. uniprot
Match: A0A7S2CGK4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CGK4_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 3.650e-21
Identity = 48/77 (62.34%), Postives = 56/77 (72.73%), Query Frame = 0
Query:    1 APAVVCTTRTWHPNIDLHTGFVSLPILTNDWRPVLSINCVIFALQLMFLEPVEEVAVNEAATAALA-NPEVFREQVR 76
            AP V CTTR WHPNI+ + G V LPIL+ DWRPVLSIN V+ ALQL+FLEP  + A N AA  AL  NP++F  QVR
Sbjct:   99 APEVTCTTRVWHPNINPNNGRVDLPILSIDWRPVLSINTVVLALQLLFLEPNPDHATNYAAAEALTKNPQLFESQVR 175          
BLAST of mRNA_H-paniculata_contig39308.10223.1 vs. uniprot
Match: A0A7R9YDT8_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDT8_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 3.200e-20
Identity = 46/76 (60.53%), Postives = 55/76 (72.37%), Query Frame = 0
Query:    2 PAVVCTTRTWHPNIDLHTGFVSLPILTNDWRPVLSINCVIFALQLMFLEPVEEVAVNEAATAALAN-PEVFREQVR 76
            P V CT+R WHPNI L TG VSL IL  DW+PV+S+N V+F LQL+FLEP  +++VN  ATAAL   PEV   QVR
Sbjct:   73 PQVHCTSRVWHPNICLRTGRVSLSILDEDWKPVISLNTVVFGLQLLFLEPNADLSVNNEATAALLKGPEVLARQVR 148          
BLAST of mRNA_H-paniculata_contig39308.10223.1 vs. uniprot
Match: G4Z9T7_PHYSP (UBC core domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4Z9T7_PHYSP)

HSP 1 Score: 86.3 bits (212), Expect = 7.890e-19
Identity = 43/76 (56.58%), Postives = 53/76 (69.74%), Query Frame = 0
Query:    2 PAVVCTTRTWHPNIDLHTGFVSLPILTNDWRPVLSINCVIFALQLMFLEPVEEVAVNEAATAALA-NPEVFREQVR 76
            P+V C TR WHPNID+ TG V +PIL  DWRPVLSIN V+  LQL+FLEPV    +N  A   L  NPE F+++V+
Sbjct:   78 PSVKCLTRVWHPNIDMATGKVMMPILGTDWRPVLSINTVLLGLQLIFLEPVNHNILNPVAAEQLRQNPEQFKKEVQ 153          
BLAST of mRNA_H-paniculata_contig39308.10223.1 vs. uniprot
Match: A0A024TIL6_9STRA (UBC core domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TIL6_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.330e-18
Identity = 45/86 (52.33%), Postives = 57/86 (66.28%), Query Frame = 0
Query:    1 APAVVCTTRTWHPNIDLHTGFVSLPILTNDWRPVLSINCVIFALQLMFLEPVEEVAVNEAATAALAN-PEVFREQVRGARESVCQG 85
            AP V    + WHPNID++TG V   IL NDWRPVLSIN ++  LQL+FLEP  E AVN+ A   L N P++FR QV+    ++C G
Sbjct:   91 APVVKSLDKIWHPNIDINTGQVMFSILGNDWRPVLSINTILLGLQLIFLEPSIEFAVNQVAATTLVNDPQLFRRQVQ---HTLCGG 173          
BLAST of mRNA_H-paniculata_contig39308.10223.1 vs. uniprot
Match: A0A485LTQ9_9STRA (Aste57867_24886 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LTQ9_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.390e-18
Identity = 43/77 (55.84%), Postives = 54/77 (70.13%), Query Frame = 0
Query:    1 APAVVCTTRTWHPNIDLHTGFVSLPILTNDWRPVLSINCVIFALQLMFLEPVEEVAVNE-AATAALANPEVFREQVR 76
            AP V    R WHPN+D+HTG V   IL  DWRPVLSIN ++  LQL+FLEP  E AVN+ AA   + NP++FR+QV+
Sbjct:   77 APLVFSLDRIWHPNVDVHTGRVMFSILGKDWRPVLSINTILLGLQLIFLEPSIESAVNQPAADTLVQNPQLFRKQVQ 153          
BLAST of mRNA_H-paniculata_contig39308.10223.1 vs. uniprot
Match: A0A329RS56_9STRA (UBC core domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A329RS56_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.560e-18
Identity = 43/77 (55.84%), Postives = 55/77 (71.43%), Query Frame = 0
Query:    1 APAVVCTTRTWHPNIDLHTGFVSLPILTNDWRPVLSINCVIFALQLMFLEPVEEVAVNEAATAAL-ANPEVFREQVR 76
            AP+V C +R WHPNID+ TG V +PIL  DWRPVLSIN V+  LQL+FLEP  +  +N AA   L  NPE F+++V+
Sbjct:   77 APSVRCLSRVWHPNIDIATGKVMMPILGKDWRPVLSINTVLLGLQLIFLEPGIDYVLNPAAAEQLHRNPEQFKKEVQ 153          
BLAST of mRNA_H-paniculata_contig39308.10223.1 vs. uniprot
Match: W2JGX7_PHYPR (UBC core domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2JGX7_PHYPR)

HSP 1 Score: 86.3 bits (212), Expect = 3.770e-18
Identity = 44/77 (57.14%), Postives = 54/77 (70.13%), Query Frame = 0
Query:    1 APAVVCTTRTWHPNIDLHTGFVSLPILTNDWRPVLSINCVIFALQLMFLEPVEEVAVNEAATAAL-ANPEVFREQVR 76
            AP+V C TR WHPNID+ TG V +PIL  DWRPVLSIN V+  LQL+FLEP  +  +N AA   L  NPE F+ +V+
Sbjct:  192 APSVRCLTRVWHPNIDIATGKVMMPILGKDWRPVLSINTVLLGLQLIFLEPGIDYILNPAAAEQLHRNPEQFKNEVQ 268          
BLAST of mRNA_H-paniculata_contig39308.10223.1 vs. uniprot
Match: A0A8J5IXT5_9STRA (UBC core domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IXT5_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 6.380e-18
Identity = 43/77 (55.84%), Postives = 55/77 (71.43%), Query Frame = 0
Query:    1 APAVVCTTRTWHPNIDLHTGFVSLPILTNDWRPVLSINCVIFALQLMFLEPVEEVAVNEAATAAL-ANPEVFREQVR 76
            AP+V C +R WHPNID+ TG V +PIL  DWRPVLSIN V+  LQL+FLEP  +  +N AA   L  NPE F+++V+
Sbjct:  178 APSVRCLSRVWHPNIDIATGKVMMPILGKDWRPVLSINTVLLGLQLIFLEPGIDYVLNPAAAEQLHRNPEQFKKEVQ 254          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig39308.10223.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNS9_ECTSI1.180e-3276.62UBC core domain-containing protein n=2 Tax=Ectocar... [more]
A0A835Z4F7_9STRA1.350e-2162.34Ubiquitin-conjugating enzyme/RWD-like protein (Fra... [more]
A0A7S2CGK4_9STRA3.650e-2162.34Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7R9YDT8_9STRA3.200e-2060.53Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
G4Z9T7_PHYSP7.890e-1956.58UBC core domain-containing protein n=3 Tax=Phytoph... [more]
A0A024TIL6_9STRA1.330e-1852.33UBC core domain-containing protein n=1 Tax=Aphanom... [more]
A0A485LTQ9_9STRA1.390e-1855.84Aste57867_24886 protein n=1 Tax=Aphanomyces stella... [more]
A0A329RS56_9STRA1.560e-1855.84UBC core domain-containing protein n=3 Tax=Phytoph... [more]
W2JGX7_PHYPR3.770e-1857.14UBC core domain-containing protein n=12 Tax=Phytop... [more]
A0A8J5IXT5_9STRA6.380e-1855.84UBC core domain-containing protein n=1 Tax=Phytoph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 1..76
e-value: 4.1E-14
score: 52.4
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 1..51
score: 12.36
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 1..84
e-value: 6.8E-18
score: 66.5
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 2..76
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 1..78
NoneNo IPR availablePANTHERPTHR24068:SF132NEDD8-CONJUGATING ENZYME UBC12coord: 1..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig39308contigH-paniculata_contig39308:98..1638 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig39308.10223.1mRNA_H-paniculata_contig39308.10223.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig39308 98..1638 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig39308.10223.1 ID=prot_H-paniculata_contig39308.10223.1|Name=mRNA_H-paniculata_contig39308.10223.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=86bp
APAVVCTTRTWHPNIDLHTGFVSLPILTNDWRPVLSINCVIFALQLMFLE
PVEEVAVNEAATAALANPEVFREQVRGARESVCQG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD