prot_H-paniculata_contig3919.10195.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3919.10195.1
Unique Nameprot_H-paniculata_contig3919.10195.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length126
Homology
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BLAST of mRNA_H-paniculata_contig3919.10195.1 vs. uniprot
Match: A0A3M7Q3E9_BRAPC (Uncharacterized protein n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7Q3E9_BRAPC)

HSP 1 Score: 53.1 bits (126), Expect = 1.200e-5
Identity = 53/122 (43.44%), Postives = 60/122 (49.18%), Query Frame = 0 
Query:    5 VSRRASASHISTLCGTHSTALPNMIKASSTPSSSIAVFHSLTELGTNSKARLKTTSTLTFLAAGDDSSSAALSQILTLVGKLRTAFASTVFAFSGVWSLAPSSHTSSLSGHASHPALMVLRA 126
            +S  ASASH ST C  HSTA  +MI ASS+ SSS+A FHS TELG  S A   T     F                       TA+A+     S   S A SSHTSSL GH S P +  LRA
Sbjct:  155 ISSLASASHRSTDCEQHSTARLSMILASSSSSSSMAAFHSFTELGIFSSALRNTF----FFXXXXXXXXXXXXXXXXXXXSCLTAWATMPLDMSSGRSRAASSHTSSLLGHCSVPFMARLRA 272
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3919.10195.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A3M7Q3E9_BRAPC1.200e-543.44Uncharacterized protein n=1 Tax=Brachionus plicati... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3919contigH-paniculata_contig3919:4665..5807 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3919.10195.1mRNA_H-paniculata_contig3919.10195.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3919 4665..5807 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3919.10195.1 ID=prot_H-paniculata_contig3919.10195.1|Name=mRNA_H-paniculata_contig3919.10195.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=126bp
AFSYVSRRASASHISTLCGTHSTALPNMIKASSTPSSSIAVFHSLTELGT
NSKARLKTTSTLTFLAAGDDSSSAALSQILTLVGKLRTAFASTVFAFSGV
WSLAPSSHTSSLSGHASHPALMVLRA
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