prot_H-paniculata_contig38729.10118.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig38729.10118.1
Unique Nameprot_H-paniculata_contig38729.10118.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length274
Homology
BLAST of mRNA_H-paniculata_contig38729.10118.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL)

HSP 1 Score: 91.3 bits (225), Expect = 3.730e-17
Identity = 46/82 (56.10%), Postives = 58/82 (70.73%), Query Frame = 0
Query:  193 LNGPEAGKWRAAMEEEWGALVEKGTWENEDPGRLPAGRKAIRTKWVFKRKLKDDGSVARYKARLVAQAFSQMEGEDFFETGA 274
            + GPEA  W+AAM++E  +L E GTW+  D   LP GRKA+  KW+FKRKL +DG+V RYKARLVAQ F+Q  G D+ E  A
Sbjct:    1 MKGPEAELWKAAMDDEMTSLRENGTWQLTD---LPPGRKAVGCKWIFKRKLDEDGNVVRYKARLVAQGFTQKFGTDYDEVFA 79          
BLAST of mRNA_H-paniculata_contig38729.10118.1 vs. uniprot
Match: UPI0015A81C6A (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015A81C6A)

HSP 1 Score: 84.3 bits (207), Expect = 1.530e-16
Identity = 45/87 (51.72%), Postives = 56/87 (64.37%), Query Frame = 0
Query:  186 PKSAPGALNGPEAGKWRAAMEEEWGALVEKGTWENEDPGRLPAGRKAIRTKWVFKRKLKDDGSVARYKARLVAQAFSQMEGEDFFET 272
            P++   AL  P+A KW+ AMEEE   L    TW   D    P GRK ++ KWVFKRKL  DG V RYKARLVA+ ++Q+EG D+ ET
Sbjct:   31 PETLEEALTSPDAEKWKLAMEEELENLKRNETW---DIVPRPEGRKVVKCKWVFKRKLNKDGQVERYKARLVARGYTQVEGIDYKET 114          
BLAST of mRNA_H-paniculata_contig38729.10118.1 vs. uniprot
Match: UPI000CD9DA15 (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD9DA15)

HSP 1 Score: 82.0 bits (201), Expect = 5.990e-16
Identity = 41/96 (42.71%), Postives = 65/96 (67.71%), Query Frame = 0
Query:  177 LTGAVSKEGPKSAPGALNGPEAGKWRAAMEEEWGALVEKGTWENEDPGRLPAGRKAIRTKWVFKRKLKDDGSVARYKARLVAQAFSQMEGEDFFET 272
            +T  V+KE P++   A++  EA  W+ A++ E  ++V+  TW+  D   LP G+K I  KW+FK+K + DG++ +YKARLVA+ + Q EG+DFF+T
Sbjct:    1 MTYVVNKE-PQTYKDAMDSSEAPFWKEAIKSEIDSIVQNNTWKLVD---LPPGQKPIGHKWIFKKKFRPDGTIEKYKARLVAKGYRQKEGQDFFDT 92          
BLAST of mRNA_H-paniculata_contig38729.10118.1 vs. uniprot
Match: A0A0J7K416_LASNI (Lectin receptor kinase n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K416_LASNI)

HSP 1 Score: 84.7 bits (208), Expect = 2.980e-15
Identity = 45/94 (47.87%), Postives = 59/94 (62.77%), Query Frame = 0
Query:  181 VSKEGPKSAPGALNGPEAGKWRAAMEEEWGALVEKGTWENEDPGRLPAGRKAIRTKWVFKRKLKDDGSVARYKARLVAQAFSQMEGEDFFETGA 274
            V K  P S   A+ GPE  KW+ A+ EE  A+ +  TW       LP GR+ I  KW+FK+KL ++G+V RYKARLVA+ +SQ EG D+ ET A
Sbjct:  169 VEKGEPVSYEEAIKGPEGEKWKEAINEELDAMEKNSTWTVVK--NLPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQREGIDYEETFA 260          
BLAST of mRNA_H-paniculata_contig38729.10118.1 vs. uniprot
Match: A0A182GDL1_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GDL1_AEDAL)

HSP 1 Score: 83.6 bits (205), Expect = 3.990e-15
Identity = 44/87 (50.57%), Postives = 59/87 (67.82%), Query Frame = 0
Query:  183 KEGPKSAPGALNGPEAGKWRAAMEEEWGALVEKGTWENEDPGRLPAGRKAIRTKWVFKRKLKDDGSVARYKARLVAQAFSQMEGEDF 269
            +E P S   A+   E+  W+AAM+EE+ +L+E GTW   +   LPAGRKAI +KWVFK+K    G+V ++KARLVAQ FSQ  G D+
Sbjct:    6 EEEPSSYEEAVRSSESDLWKAAMQEEYDSLMENGTWVLAE---LPAGRKAIGSKWVFKKKEDSAGNVCKFKARLVAQGFSQQFGVDY 89          
BLAST of mRNA_H-paniculata_contig38729.10118.1 vs. uniprot
Match: A0A1W7R6D9_AEDAL (Putative polyprotein (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6D9_AEDAL)

HSP 1 Score: 85.5 bits (210), Expect = 4.410e-15
Identity = 49/93 (52.69%), Postives = 62/93 (66.67%), Query Frame = 0
Query:  177 LTGAVSKEGPKSAPGALNGPEAGKWRAAMEEEWGALVEKGTWENEDPGRLPAGRKAIRTKWVFKRKLKDDGSVARYKARLVAQAFSQMEGEDF 269
            L  AV+ E PKS   AL  PE+ KW+AAM EE  +L+EK TW   D  +LPA RKAI ++WV+KRK   +G V R+KARLVAQ F Q  G ++
Sbjct:  636 LAAAVACE-PKSYAEALASPESDKWKAAMAEEMASLMEKDTW---DVVQLPADRKAIGSRWVYKRKESANGDVVRFKARLVAQGFRQKFGSEY 724          
BLAST of mRNA_H-paniculata_contig38729.10118.1 vs. uniprot
Match: A0A060BT00_9BACT (RVT_2 (Fragment) n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A060BT00_9BACT)

HSP 1 Score: 79.3 bits (194), Expect = 4.510e-15
Identity = 37/81 (45.68%), Postives = 54/81 (66.67%), Query Frame = 0
Query:  192 ALNGPEAGKWRAAMEEEWGALVEKGTWENEDPGRLPAGRKAIRTKWVFKRKLKDDGSVARYKARLVAQAFSQMEGEDFFET 272
            A   P+A  W+ A+  E  +++  GTWE  +    P G K +  KWVFK+KL+ DG++ +YKARLVA+ ++Q EGEDFF+T
Sbjct:   10 AYASPDADYWKEAVRSEMDSIIANGTWEVTE---RPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDT 87          
BLAST of mRNA_H-paniculata_contig38729.10118.1 vs. uniprot
Match: A0A226DIP6_FOLCA (Copia protein n=1 Tax=Folsomia candida TaxID=158441 RepID=A0A226DIP6_FOLCA)

HSP 1 Score: 85.5 bits (210), Expect = 4.960e-15
Identity = 91/281 (32.38%), Postives = 126/281 (44.84%), Query Frame = 0
Query:    5 LGYDDDSLSYRIYNPESKSVQLSRNVRFDEQDFVTGHRGQLEHDGTRDMKDLLSAPVTNTEDRTSVSEMPPTLPTHSLPAA-----SANAFSVLSD--DDDDESNGDSKMKDVEPAVENAPSAGTDTPASQGNTTKQSGTEVQRP--RDRS----PIRTRARAKENREEDPGATAREAKVEGTGNLTGAVSKEGPKSAPGALNGPEAGKWRAAMEEEWGALVEKGTWENEDPGRLPAGRKAIRTKWVFKRKLKDDGSVARYKARLVAQAFSQMEGEDFFET 272
            +GYD  +  YR+Y+P+   +   RNVRF+E       R   +      +  + S+P T T  ++ V+  P T  T+S   +       N+ S+ SD  D DDE         +E  +   P  G   P  Q          V +   RDRS    P++ +  A   +++D     +            A     PKS   A   P+A KW  AMEEE   L EK TWE       P G + + +KWV+K KLK DG +ARYKARLV + F Q  G DFFET
Sbjct:   91 VGYDHMNKVYRLYDPKKGVIFPERNVRFNETTSSHPVRDDDDDFEGESVPQVKSSPST-TPPQSPVAAAPETTVTNSSDPSYQSPIGDNSTSLWSDEMDTDDE---------LETTIVITPQTG---PQQQVRLENDEAVVVPKKNLRDRSKIMIPLKYQLHANTTQDDDEPVNYQ---------ACIATLPTEPKSYTEATTSPDADKWVKAMEEEINCLNEKNTWEIVPK---PKGVRILDSKWVYKLKLKPDGGIARYKARLVVRGFRQEYGVDFFET 346          
BLAST of mRNA_H-paniculata_contig38729.10118.1 vs. uniprot
Match: A0A6V7JMB6_9HYME (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7JMB6_9HYME)

HSP 1 Score: 80.9 bits (198), Expect = 5.790e-15
Identity = 45/93 (48.39%), Postives = 57/93 (61.29%), Query Frame = 0
Query:  182 SKEGPKSAPGALNGPEAGKWRAAMEEEWGALVEKGTWENEDPGRLPAGRKAIRTKWVFKRKLKDDGSVARYKARLVAQAFSQMEGEDFFETGA 274
            ++E P S   A++GP+A KWR AM+EE  +L+   TW  +    LP G+ A+  KWVFK K   DG   RYKARLVAQ FSQ  G D+ E  A
Sbjct:   31 AQEEPISYEEAMDGPDAEKWRIAMDEELNSLMSNNTWSVQQ---LPKGKSAVGCKWVFKIKRHADGRPDRYKARLVAQGFSQKFGTDYNEVFA 120          
BLAST of mRNA_H-paniculata_contig38729.10118.1 vs. uniprot
Match: A0A5B7CAQ6_DAVIN (Putative Polyprotein (Fragment) n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7CAQ6_DAVIN)

HSP 1 Score: 78.6 bits (192), Expect = 6.060e-15
Identity = 41/81 (50.62%), Postives = 51/81 (62.96%), Query Frame = 0
Query:  192 ALNGPEAGKWRAAMEEEWGALVEKGTWENEDPGRLPAGRKAIRTKWVFKRKLKDDGSVARYKARLVAQAFSQMEGEDFFET 272
            AL   +A  WR A+++E  +L   GTWE  D   LP   K I  KW+ K+KLK DGSV +YKARLVA+ F Q E  DFF+T
Sbjct:    3 ALTSSDADSWREAIQDEMDSLKSNGTWELVD---LPPSCKTIGCKWILKKKLKPDGSVDKYKARLVAKGFRQKENIDFFDT 80          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig38729.10118.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A182GIT5_AEDAL3.730e-1756.10Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI0015A81C6A1.530e-1651.72uncharacterized mitochondrial protein AtMg00820-li... [more]
UPI000CD9DA155.990e-1642.71uncharacterized mitochondrial protein AtMg00820-li... [more]
A0A0J7K416_LASNI2.980e-1547.87Lectin receptor kinase n=1 Tax=Lasius niger TaxID=... [more]
A0A182GDL1_AEDAL3.990e-1550.57Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1W7R6D9_AEDAL4.410e-1552.69Putative polyprotein (Fragment) n=1 Tax=Aedes albo... [more]
A0A060BT00_9BACT4.510e-1545.68RVT_2 (Fragment) n=1 Tax=uncultured bacterium TaxI... [more]
A0A226DIP6_FOLCA4.960e-1532.38Copia protein n=1 Tax=Folsomia candida TaxID=15844... [more]
A0A6V7JMB6_9HYME5.790e-1548.39Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5B7CAQ6_DAVIN6.060e-1550.62Putative Polyprotein (Fragment) n=1 Tax=Davidia in... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 226..272
e-value: 6.4E-11
score: 42.3
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 2..272
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..272

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig38729contigH-paniculata_contig38729:1153..2025 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig38729.10118.1mRNA_H-paniculata_contig38729.10118.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig38729 779..2025 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig38729.10118.1 ID=prot_H-paniculata_contig38729.10118.1|Name=mRNA_H-paniculata_contig38729.10118.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=274bp
MGVFLGYDDDSLSYRIYNPESKSVQLSRNVRFDEQDFVTGHRGQLEHDGT
RDMKDLLSAPVTNTEDRTSVSEMPPTLPTHSLPAASANAFSVLSDDDDDE
SNGDSKMKDVEPAVENAPSAGTDTPASQGNTTKQSGTEVQRPRDRSPIRT
RARAKENREEDPGATAREAKVEGTGNLTGAVSKEGPKSAPGALNGPEAGK
WRAAMEEEWGALVEKGTWENEDPGRLPAGRKAIRTKWVFKRKLKDDGSVA
RYKARLVAQAFSQMEGEDFFETGA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like