prot_H-paniculata_contig38727.10117.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig38727.10117.1
Unique Nameprot_H-paniculata_contig38727.10117.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length80
Homology
BLAST of mRNA_H-paniculata_contig38727.10117.1 vs. uniprot
Match: A0A6H5LFZ8_9PHAE (Diaminopimelate epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LFZ8_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 7.670e-42
Identity = 69/79 (87.34%), Postives = 75/79 (94.94%), Query Frame = 0
Query:    1 MSRHHLKMVVWERGCGITQACGTGACALVVAAVLNGLADRQCTVTLPGGDLLIEWRESDGKVYMTGPAKLAFTGDAVVR 79
            ++R H+KMVVWERGCGITQACGTGACALVVA+VL GLADR+CTVTLPGGDL IEWRESDGKVYMTGPA+LAF GDAVVR
Sbjct:  255 LNRGHVKMVVWERGCGITQACGTGACALVVASVLAGLADRKCTVTLPGGDLQIEWRESDGKVYMTGPAELAFQGDAVVR 333          
BLAST of mRNA_H-paniculata_contig38727.10117.1 vs. uniprot
Match: A0A835YU85_9STRA (Diaminopimelate epimerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU85_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.170e-34
Identity = 60/79 (75.95%), Postives = 67/79 (84.81%), Query Frame = 0
Query:    1 MSRHHLKMVVWERGCGITQACGTGACALVVAAVLNGLADRQCTVTLPGGDLLIEWRESDGKVYMTGPAKLAFTGDAVVR 79
            +SR HLKM VWERG G T ACGTGACALVVAAVLNGLADR+CTVTLPGGDL+I+WRE+D KVYMTGPA   F+G   V+
Sbjct:  226 LSRSHLKMKVWERGAGATLACGTGACALVVAAVLNGLADRKCTVTLPGGDLVIDWREADNKVYMTGPATPVFSGSVRVQ 304          
BLAST of mRNA_H-paniculata_contig38727.10117.1 vs. uniprot
Match: A0A8J5XME3_DIALT (Diaminopimelate epimerase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XME3_DIALT)

HSP 1 Score: 122 bits (305), Expect = 4.210e-32
Identity = 57/74 (77.03%), Postives = 66/74 (89.19%), Query Frame = 0
Query:    1 MSRHHLKMVVWERGCGITQACGTGACALVVAAVLNGLADRQCTVTLPGGDLLIEWRESDGKVYMTGPAKLAFTG 74
            +SR HL+M VWERG G T ACGTGACAL+VAAVLNGLA+R+ TV+LPGGDL IEWRESDGK+ MTGPA+LA+TG
Sbjct:  229 LSRTHLQMRVWERGAGATLACGTGACALLVAAVLNGLAERRATVSLPGGDLEIEWRESDGKITMTGPAELAYTG 302          
BLAST of mRNA_H-paniculata_contig38727.10117.1 vs. uniprot
Match: A0A0D2IWC9_9CHLO (Diaminopimelate epimerase n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2IWC9_9CHLO)

HSP 1 Score: 114 bits (284), Expect = 4.800e-31
Identity = 53/78 (67.95%), Postives = 60/78 (76.92%), Query Frame = 0
Query:    1 MSRHHLKMVVWERGCGITQACGTGACALVVAAVLNGLADRQCTVTLPGGDLLIEWRESDGKVYMTGPAKLAFTGDAVV 78
            ++R H++MVVWERG G T ACGTGACA VVA VL G  DRQC V LPGG L IEWRESD  +YMTGPA+LAF+G   V
Sbjct:   39 LTRSHVRMVVWERGAGRTLACGTGACATVVAGVLEGKVDRQCRVDLPGGPLHIEWRESDNHIYMTGPAELAFSGSVPV 116          
BLAST of mRNA_H-paniculata_contig38727.10117.1 vs. uniprot
Match: A0A7S0NVQ4_9EUKA (Hypothetical protein n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NVQ4_9EUKA)

HSP 1 Score: 112 bits (281), Expect = 8.860e-31
Identity = 54/74 (72.97%), Postives = 59/74 (79.73%), Query Frame = 0
Query:    1 MSRHHLKMVVWERGCGITQACGTGACALVVAAVLNGLADRQCTVTLPGGDLLIEWRESDGKVYMTGPAKLAFTG 74
            +SR HLKM VWERG G T ACGTGACAL+VAAVL GLA+R  TV+LPGGDLLI+WRE   KVYMTGPA   F G
Sbjct:   24 LSRTHLKMKVWERGAGPTLACGTGACALLVAAVLGGLAERTATVSLPGGDLLIDWREDSNKVYMTGPAVPVFDG 97          
BLAST of mRNA_H-paniculata_contig38727.10117.1 vs. uniprot
Match: A0A7S2GTM2_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2GTM2_9EUKA)

HSP 1 Score: 113 bits (282), Expect = 5.720e-30
Identity = 53/74 (71.62%), Postives = 59/74 (79.73%), Query Frame = 0
Query:    1 MSRHHLKMVVWERGCGITQACGTGACALVVAAVLNGLADRQCTVTLPGGDLLIEWRESDGKVYMTGPAKLAFTG 74
            +S  HLKMVVWERG G T ACGTGACAL VAAVL G A+R CTV+LPGGDL IEW E+D K+YMTGPA+  F G
Sbjct:  102 LSPTHLKMVVWERGAGPTLACGTGACALTVAAVLAGKAERSCTVSLPGGDLEIEWSEADNKIYMTGPAERVFAG 175          
BLAST of mRNA_H-paniculata_contig38727.10117.1 vs. uniprot
Match: A0A7N0U528_KALFE (Uncharacterized protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0U528_KALFE)

HSP 1 Score: 112 bits (279), Expect = 1.170e-29
Identity = 53/76 (69.74%), Postives = 59/76 (77.63%), Query Frame = 0
Query:    1 MSRHHLKMVVWERGCGITQACGTGACALVVAAVLNGLADRQCTVTLPGGDLLIEWRESDGKVYMTGPAKLAFTGDA 76
            +S  HLKM VWERG G T ACGTGACALVVAAVL G A RQCTV LPGG L IEWRE+D  +YMTGPA++ + G A
Sbjct:   90 LSPTHLKMRVWERGAGATLACGTGACALVVAAVLEGRASRQCTVDLPGGPLEIEWREADNHIYMTGPAEVVYYGSA 165          
BLAST of mRNA_H-paniculata_contig38727.10117.1 vs. uniprot
Match: A0A2K1JXK3_PHYPA (Diaminopimelate epimerase n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JXK3_PHYPA)

HSP 1 Score: 117 bits (292), Expect = 1.250e-29
Identity = 55/78 (70.51%), Postives = 61/78 (78.21%), Query Frame = 0
Query:    2 SRHHLKMVVWERGCGITQACGTGACALVVAAVLNGLADRQCTVTLPGGDLLIEWRESDGKVYMTGPAKLAFTGDAVVR 79
            SR+HLKM VWERG G TQACGTGACA+VVAAV  G A+R+CTV LPGG L IEWRESD  +YMTGPAK  F G  V+ 
Sbjct:  302 SRNHLKMRVWERGAGATQACGTGACAVVVAAVKEGRAERRCTVDLPGGPLEIEWRESDNHIYMTGPAKRVFQGTVVLE 379          
BLAST of mRNA_H-paniculata_contig38727.10117.1 vs. uniprot
Match: A0A0A9CS69_ARUDO (Pco102509 n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9CS69_ARUDO)

HSP 1 Score: 109 bits (273), Expect = 3.020e-29
Identity = 51/77 (66.23%), Postives = 58/77 (75.32%), Query Frame = 0
Query:    1 MSRHHLKMVVWERGCGITQACGTGACALVVAAVLNGLADRQCTVTLPGGDLLIEWRESDGKVYMTGPAKLAFTGDAV 77
            +SR HLKM VWERG G T ACGTGACA+V+AAVL G A+R+C V LPGG L IEWRE D  VYMTGPA+  F G  +
Sbjct:   49 LSRSHLKMRVWERGAGATLACGTGACAVVIAAVLEGRAERKCIVDLPGGPLEIEWREDDNHVYMTGPAEAIFYGSII 125          
BLAST of mRNA_H-paniculata_contig38727.10117.1 vs. uniprot
Match: UPI000B8C7317 (diaminopimelate epimerase, chloroplastic-like n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8C7317)

HSP 1 Score: 111 bits (278), Expect = 3.080e-29
Identity = 53/73 (72.60%), Postives = 58/73 (79.45%), Query Frame = 0
Query:    2 SRHHLKMVVWERGCGITQACGTGACALVVAAVLNGLADRQCTVTLPGGDLLIEWRESDGKVYMTGPAKLAFTG 74
            SR HLKM VWERG G T ACGTGACA+VVAAVL G +DR+CTV LPGG L IEWRE D  VYMTGPA++ F G
Sbjct:  114 SRSHLKMRVWERGAGATLACGTGACAVVVAAVLEGHSDRKCTVDLPGGPLDIEWREEDNHVYMTGPAEVVFYG 186          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig38727.10117.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LFZ8_9PHAE7.670e-4287.34Diaminopimelate epimerase n=2 Tax=Ectocarpus TaxID... [more]
A0A835YU85_9STRA1.170e-3475.95Diaminopimelate epimerase n=1 Tax=Tribonema minus ... [more]
A0A8J5XME3_DIALT4.210e-3277.03Diaminopimelate epimerase n=2 Tax=Diacronema luthe... [more]
A0A0D2IWC9_9CHLO4.800e-3167.95Diaminopimelate epimerase n=1 Tax=Monoraphidium ne... [more]
A0A7S0NVQ4_9EUKA8.860e-3172.97Hypothetical protein n=2 Tax=Calcidiscus leptoporu... [more]
A0A7S2GTM2_9EUKA5.720e-3071.62Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7N0U528_KALFE1.170e-2969.74Uncharacterized protein n=1 Tax=Kalanchoe fedtsche... [more]
A0A2K1JXK3_PHYPA1.250e-2970.51Diaminopimelate epimerase n=2 Tax=Physcomitrium pa... [more]
A0A0A9CS69_ARUDO3.020e-2966.23Pco102509 n=1 Tax=Arundo donax TaxID=35708 RepID=A... [more]
UPI000B8C73173.080e-2972.60diaminopimelate epimerase, chloroplastic-like n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001653Diaminopimelate epimerase, DapFPFAMPF01678DAP_epimerasecoord: 3..70
e-value: 7.4E-17
score: 61.7
IPR001653Diaminopimelate epimerase, DapFPANTHERPTHR31689FAMILY NOT NAMEDcoord: 2..76
NoneNo IPR availableGENE3D3.10.310.10coord: 1..65
e-value: 4.4E-28
score: 99.9
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..26
score: 6.0
NoneNo IPR availableSUPERFAMILY54506Diaminopimelate epimerase-likecoord: 2..74
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig38727contigH-paniculata_contig38727:490..729 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig38727.10117.1mRNA_H-paniculata_contig38727.10117.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig38727 484..729 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig38727.10117.1 ID=prot_H-paniculata_contig38727.10117.1|Name=mRNA_H-paniculata_contig38727.10117.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=80bp
MSRHHLKMVVWERGCGITQACGTGACALVVAAVLNGLADRQCTVTLPGGD
LLIEWRESDGKVYMTGPAKLAFTGDAVVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001653DAP_epimerase_DapF