prot_H-paniculata_contig3838.10051.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3838.10051.1
Unique Nameprot_H-paniculata_contig3838.10051.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length204
Homology
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BLAST of mRNA_H-paniculata_contig3838.10051.1 vs. uniprot
Match: A0A6T9LUZ6_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A6T9LUZ6_9EUKA)

HSP 1 Score: 73.9 bits (180), Expect = 7.150e-13
Identity = 47/130 (36.15%), Postives = 71/130 (54.62%), Query Frame = 0 
Query:   65 VIVARPAKSSA--AQKINKPLGQESFRRIRDARQLLDRVDVPLRARNFDEVQELLEDPASSKLDKALTDLVQSNVLPSDDKVSVGTIRTYGLAADALITLGGLSAATRDGDGGEARKMLVLTKEALNDIL 192
            V   RP   SA  A K+N  +   ++  +R AR  LD+VD  +   ++     +L +P  + L+  L  LV S  L  D++ S+GTI+ YG+ ADALI +GGL +A R GDG  A       K +L++I+
Sbjct:   55 VRTGRPKAGSAKAAGKVNAAVAYAAYAELRAARSSLDKVDSLIGKSDYKAAASILTEPPLATLEVNLLTLVASPELGPDERKSIGTIKRYGVGADALIMMGGLGSALRSGDGSGASDYTSKAKASLDEIV 184
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BLAST of mRNA_H-paniculata_contig3838.10051.1 vs. uniprot
Match: A0A835ZDP8_9STRA (Tetrapyrrole methylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDP8_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 1.530e-10
Identity = 37/62 (59.68%), Postives = 45/62 (72.58%), Query Frame = 0 
Query:  129 LTDLVQSNVLPSDDKVSVGTIRTYGLAADALITLGGLSAATRDGDGGEARKMLVLTKEALND 190
            L +LV SNVL  +DKV+VGTIR YG+AAD LITLGG+ AA  D D  EA + L L K +L+D
Sbjct:  213 LLNLVNSNVLEREDKVAVGTIRRYGIAADILITLGGVRAAANDEDAREALRSLTLAKNSLDD 274
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3838.10051.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6T9LUZ6_9EUKA7.150e-1336.15Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A835ZDP8_9STRA1.530e-1059.68Tetrapyrrole methylase n=1 Tax=Tribonema minus Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 197..203
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..203
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..27
score: 0.543

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3838contigH-paniculata_contig3838:939..3868 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3838.10051.1mRNA_H-paniculata_contig3838.10051.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3838 2..3884 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3838.10051.1 ID=prot_H-paniculata_contig3838.10051.1|Name=mRNA_H-paniculata_contig3838.10051.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=204bp
MRPCFGRIMRFLVQASAALVLFPLANGFSMNLARSPGKVQRGTTSRHEII
EQFVKIASGTFAGGVIVARPAKSSAAQKINKPLGQESFRRIRDARQLLDR
VDVPLRARNFDEVQELLEDPASSKLDKALTDLVQSNVLPSDDKVSVGTIR
TYGLAADALITLGGLSAATRDGDGGEARKMLVLTKEALNDILTIGVNNDL
NRT*
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