prot_H-paniculata_contig38362.10048.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig38362.10048.1
Unique Nameprot_H-paniculata_contig38362.10048.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length73
Homology
BLAST of mRNA_H-paniculata_contig38362.10048.1 vs. uniprot
Match: A0A6H5KPV1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV1_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 8.970e-18
Identity = 37/71 (52.11%), Postives = 52/71 (73.24%), Query Frame = 0
Query:    1 PEPRSFPAACASQYADVWKESMDSEFEGLIAAGVFSEVKEVPKGCNVVDSKWVYKWKCDPQGMIDRAKSRM 71
            PEP S+  A  S++A+VW  +M +EFEGL+ AG FS   +VP GCNV+D++WV+KWK D  G I +AK+R+
Sbjct:  165 PEPDSYQEARQSKHAEVWDVAMSAEFEGLVRAGTFSLAVKVPIGCNVIDARWVFKWKADETGKIVKAKARL 235          
BLAST of mRNA_H-paniculata_contig38362.10048.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 3.120e-17
Identity = 34/71 (47.89%), Postives = 52/71 (73.24%), Query Frame = 0
Query:    1 PEPRSFPAACASQYADVWKESMDSEFEGLIAAGVFSEVKEVPKGCNVVDSKWVYKWKCDPQGMIDRAKSRM 71
            PEP S+  A  S++A +W ++M +E EGLI AG F+   ++P+GCNV+D++WV+KWK D  G I +AK+R+
Sbjct:  211 PEPGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARL 281          
BLAST of mRNA_H-paniculata_contig38362.10048.1 vs. uniprot
Match: A0A6H5LDZ0_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDZ0_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 3.140e-17
Identity = 34/71 (47.89%), Postives = 52/71 (73.24%), Query Frame = 0
Query:    1 PEPRSFPAACASQYADVWKESMDSEFEGLIAAGVFSEVKEVPKGCNVVDSKWVYKWKCDPQGMIDRAKSRM 71
            PEP S+  A  S++A +W ++M +E EGLI AG F+   ++P+GCNV+D++WV+KWK D  G I +AK+R+
Sbjct:  416 PEPGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARL 486          
BLAST of mRNA_H-paniculata_contig38362.10048.1 vs. uniprot
Match: A0A6H5J594_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J594_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 3.150e-17
Identity = 34/71 (47.89%), Postives = 52/71 (73.24%), Query Frame = 0
Query:    1 PEPRSFPAACASQYADVWKESMDSEFEGLIAAGVFSEVKEVPKGCNVVDSKWVYKWKCDPQGMIDRAKSRM 71
            PEP S+  A  S++A +W ++M +E EGLI AG F+   ++P+GCNV+D++WV+KWK D  G I +AK+R+
Sbjct:  480 PEPGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARL 550          
BLAST of mRNA_H-paniculata_contig38362.10048.1 vs. uniprot
Match: A0A6H5KHE8_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE8_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 3.150e-17
Identity = 34/71 (47.89%), Postives = 52/71 (73.24%), Query Frame = 0
Query:    1 PEPRSFPAACASQYADVWKESMDSEFEGLIAAGVFSEVKEVPKGCNVVDSKWVYKWKCDPQGMIDRAKSRM 71
            PEP S+  A  S++A +W ++M +E EGLI AG F+   ++P+GCNV+D++WV+KWK D  G I +AK+R+
Sbjct:  624 PEPGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARL 694          
BLAST of mRNA_H-paniculata_contig38362.10048.1 vs. uniprot
Match: A0A6H5K622_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K622_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 3.160e-17
Identity = 34/71 (47.89%), Postives = 52/71 (73.24%), Query Frame = 0
Query:    1 PEPRSFPAACASQYADVWKESMDSEFEGLIAAGVFSEVKEVPKGCNVVDSKWVYKWKCDPQGMIDRAKSRM 71
            PEP S+  A  S++A +W ++M +E EGLI AG F+   ++P+GCNV+D++WV+KWK D  G I +AK+R+
Sbjct:  830 PEPGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARL 900          
BLAST of mRNA_H-paniculata_contig38362.10048.1 vs. uniprot
Match: A0A6H5JH25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH25_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 1.100e-16
Identity = 33/71 (46.48%), Postives = 51/71 (71.83%), Query Frame = 0
Query:    1 PEPRSFPAACASQYADVWKESMDSEFEGLIAAGVFSEVKEVPKGCNVVDSKWVYKWKCDPQGMIDRAKSRM 71
            PEP S+  A  S++A +W ++M +E EGLI AG F+   ++P+GCNV+D++WV+KWK D  G I + K+R+
Sbjct:  806 PEPGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKTKARL 876          
BLAST of mRNA_H-paniculata_contig38362.10048.1 vs. uniprot
Match: A0A6H5JP36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP36_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 2.040e-16
Identity = 33/71 (46.48%), Postives = 52/71 (73.24%), Query Frame = 0
Query:    1 PEPRSFPAACASQYADVWKESMDSEFEGLIAAGVFSEVKEVPKGCNVVDSKWVYKWKCDPQGMIDRAKSRM 71
            PEP S+  A  +++A +W ++M +E EGLI AG F+   ++P+GCNV+D++WV+KWK D  G I +AK+R+
Sbjct:  144 PEPGSYQEALRAKHATIWDKAMCAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARL 214          
BLAST of mRNA_H-paniculata_contig38362.10048.1 vs. uniprot
Match: A0A6H5JFT6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFT6_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 2.580e-16
Identity = 34/70 (48.57%), Postives = 50/70 (71.43%), Query Frame = 0
Query:    2 EPRSFPAACASQYADVWKESMDSEFEGLIAAGVFSEVKEVPKGCNVVDSKWVYKWKCDPQGMIDRAKSRM 71
            EP S+  A  S+Y+ +W ++M +EFEGL+ AG F+   +VP GCNVVD++WVYKWK    G + +AK+R+
Sbjct:   39 EPGSYKEARQSKYSSIWDKTMSAEFEGLLRAGTFALAVKVPIGCNVVDARWVYKWKAHETGKLVKAKARL 108          
BLAST of mRNA_H-paniculata_contig38362.10048.1 vs. uniprot
Match: A0A6H5KFW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFW5_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 7.010e-16
Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 0
Query:    2 EPRSFPAACASQYADVWKESMDSEFEGLIAAGVFSEVKEVPKGCNVVDSKWVYKWKCDPQGMIDRAKSRM 71
            EP S+  A  S++A +  ++M +EFEGL+ AG F+   + P GCNV+D++WVYKWK D  G I +AK+R+
Sbjct:   30 EPGSYREARQSKHAVISDKAMPAEFEGLLRAGTFALAVKAPMGCNVIDARWVYKWKADETGKIVKAKARL 99          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig38362.10048.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KPV1_9PHAE8.970e-1852.11Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JV80_9PHAE3.120e-1747.89Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5LDZ0_9PHAE3.140e-1747.89CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5J594_9PHAE3.150e-1747.89Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KHE8_9PHAE3.150e-1747.89CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K622_9PHAE3.160e-1747.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JH25_9PHAE1.100e-1646.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JP36_9PHAE2.040e-1646.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFT6_9PHAE2.580e-1648.57Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KFW5_9PHAE7.010e-1647.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig38362contigH-paniculata_contig38362:1560..1778 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig38362.10048.1mRNA_H-paniculata_contig38362.10048.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig38362 1560..1778 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig38362.10048.1 ID=prot_H-paniculata_contig38362.10048.1|Name=mRNA_H-paniculata_contig38362.10048.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=73bp
PEPRSFPAACASQYADVWKESMDSEFEGLIAAGVFSEVKEVPKGCNVVDS
KWVYKWKCDPQGMIDRAKSRMY*
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