prot_H-paniculata_contig38280.10030.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig38280.10030.1
Unique Nameprot_H-paniculata_contig38280.10030.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length106
Homology
BLAST of mRNA_H-paniculata_contig38280.10030.1 vs. uniprot
Match: D7G3L2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3L2_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 8.830e-29
Identity = 56/104 (53.85%), Postives = 72/104 (69.23%), Query Frame = 0
Query:    1 GVRIFHLDEDFTLRTHLLAVKLFRPASELVGKVTSKLATKWVKQVLRQFRPTEEDIAGAVTDAGTNVVSGVGWAFNWKWCIPHLLNRITTDGSGMALTKKLSKN 104
            GVR+F+LDE   ++THLLA++ FRP     G  T  +  KWV+QVL Q    +EDIAGAVTDAG++V  GV  A+ W+WC+PH LNR T DG+GM   K+ SKN
Sbjct:  165 GVRVFYLDEKMNVKTHLLAIRGFRPP----GAQTGDVVCKWVRQVLGQHGIRDEDIAGAVTDAGSDVRKGVSQAWPWEWCLPHALNRATIDGTGMTQVKEKSKN 264          
BLAST of mRNA_H-paniculata_contig38280.10030.1 vs. uniprot
Match: D7G4Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Z8_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 1.500e-28
Identity = 56/104 (53.85%), Postives = 72/104 (69.23%), Query Frame = 0
Query:    1 GVRIFHLDEDFTLRTHLLAVKLFRPASELVGKVTSKLATKWVKQVLRQFRPTEEDIAGAVTDAGTNVVSGVGWAFNWKWCIPHLLNRITTDGSGMALTKKLSKN 104
            GVR+F+LDE   ++THLLA++ FRP     G  T  +  KWV+QVL Q    +EDIAGAVTDAG++V  GV  A+ W+WC+PH LNR T DG+GM   K+ SKN
Sbjct:  165 GVRVFYLDEKMNVKTHLLAIRGFRPP----GAQTGDVVCKWVRQVLGQHGIRDEDIAGAVTDAGSDVRKGVSQAWPWEWCLPHALNRATIDGTGMTQVKEKSKN 264          
BLAST of mRNA_H-paniculata_contig38280.10030.1 vs. uniprot
Match: A0A6H5KHQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ8_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 4.690e-27
Identity = 57/105 (54.29%), Postives = 75/105 (71.43%), Query Frame = 0
Query:    1 GVRIFHLDEDFTLRTHLLAVKLFRPASELVGKVTSKLATKWVKQVLRQFRPTEEDIAGAVTDAGTNVVSGVGWAFNWKWCIPHLLNRITTDGSGMALTKKLSKNL 105
            GVRIF++ E   LR++LLAVKLF+P S L G  T  +  +WV QVL Q      D AGAV+DAG++V SGV  +F+ +WC+PH+LNR T DG+G+A T +LSKNL
Sbjct:    4 GVRIFYMTEIMILRSYLLAVKLFQPCSAL-GPTTGTVVMEWVVQVLAQHGLRPSDFAGAVSDAGSDVSSGVVKSFSREWCLPHMLNRATIDGTGLANTTRLSKNL 107          
BLAST of mRNA_H-paniculata_contig38280.10030.1 vs. uniprot
Match: A0A6H5JP19_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP19_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 1.560e-26
Identity = 59/105 (56.19%), Postives = 69/105 (65.71%), Query Frame = 0
Query:    1 GVRIFHLDEDFTLRTHLLAVKLFRPASELVGKVTSKLATKWVKQVLRQFRPTEEDIAGAVTDAGTNVVSGVGWAFNWKWCIPHLLNRITTDGSGMALTKKLSKNL 105
             VRIF++D    LRTHLLAVKLFRPA  L GKVT K+  KW  QVL Q     E +AGAVTD G +V +G+G      WC PH+LNR+  DG+GMA T   SKNL
Sbjct:   82 AVRIFYIDSSGFLRTHLLAVKLFRPAPSL-GKVTGKVVLKWFLQVLGQHGIPIERLAGAVTDGGGDVRTGIGQVATRAWCGPHMLNRVIIDGTGMANTANQSKNL 185          
BLAST of mRNA_H-paniculata_contig38280.10030.1 vs. uniprot
Match: A0A6H5L6Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Z1_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 1.320e-22
Identity = 46/107 (42.99%), Postives = 73/107 (68.22%), Query Frame = 0
Query:    1 GVRIFHLDEDFTLRTHLLAVKLFRPASELV---GKVTSKLATKWVKQVLRQFRPTEEDIAGAVTDAGTNVVSGVGWAFNWKWCIPHLLNRITTDGSGMALTKKLSKN 104
            GVR+ +++E+  +++ +L VKLFRP   +    GK+T ++  KW  QVL Q     E+ AGAV+D+G++V +G+  AF  +WCIPH++NR+T DG+GM+ +   SKN
Sbjct:  305 GVRVCYMNENMVIKSFMLGVKLFRPKPGVGMDDGKITGRVVLKWNAQVLGQHGLRNENFAGAVSDSGSDVSTGIAKAFRREWCIPHMINRVTIDGTGMSNSPASSKN 411          
BLAST of mRNA_H-paniculata_contig38280.10030.1 vs. uniprot
Match: A0A6H5KX27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX27_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 1.330e-22
Identity = 46/107 (42.99%), Postives = 73/107 (68.22%), Query Frame = 0
Query:    1 GVRIFHLDEDFTLRTHLLAVKLFRPASELV---GKVTSKLATKWVKQVLRQFRPTEEDIAGAVTDAGTNVVSGVGWAFNWKWCIPHLLNRITTDGSGMALTKKLSKN 104
            GVR+ +++E+  +++ +L VKLFRP   +    GK+T ++  KW  QVL Q     E+ AGAV+D+G++V +G+  AF  +WCIPH++NR+T DG+GM+ +   SKN
Sbjct:  226 GVRVCYMNENMVIKSFMLGVKLFRPKPGVGMDDGKITGRVVLKWNAQVLGQHGLRNENFAGAVSDSGSDVSTGIAKAFRREWCIPHMINRVTIDGTGMSNSPASSKN 332          
BLAST of mRNA_H-paniculata_contig38280.10030.1 vs. uniprot
Match: A0A6H5K7T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7T5_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 1.700e-19
Identity = 50/105 (47.62%), Postives = 62/105 (59.05%), Query Frame = 0
Query:    1 GVRIFHLDEDFTLRTHLLAVKLFRPASELVGKVTSKLATKWVKQVLRQFRPTEEDIAGAVTDAGTNVVSGVGWAFNWKWCIPHLLNRITTDGSGMALTKKLSKNL 105
            GVRIF++ E+  LR++LLAVKLF+P S L G  T  +  KWV QVL Q                     GVG  F  +WC+PH+LNR T DG+GMA T +LSKNL
Sbjct:  335 GVRIFYMTENMILRSYLLAVKLFQPCSAL-GPTTGTVVMKWVVQVLAQH--------------------GVGKGFGREWCLPHMLNRATIDGTGMANTTRLSKNL 418          
BLAST of mRNA_H-paniculata_contig38280.10030.1 vs. uniprot
Match: A0A225UZJ1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UZJ1_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 1.790e-5
Identity = 27/68 (39.71%), Postives = 41/68 (60.29%), Query Frame = 0
Query:    1 GVRIFHLDEDFTLRTHLLAVKLFRPA-SELVGKVTSKLATKWVKQVLRQFRPTEEDIAGAVTDAGTNV 67
            G+R++ +DE FTLR+ LL V+ F P  SE  G +      +WV ++L  F  +  D+ G+ TDAG +V
Sbjct:   62 GLRLYFIDESFTLRSILLGVRHFNPRYSERAGGIRGPFM-RWVSELLSDFGLSASDLFGSTTDAGPDV 128          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig38280.10030.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G3L2_ECTSI8.830e-2953.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4Z8_ECTSI1.500e-2853.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KHQ8_9PHAE4.690e-2754.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JP19_9PHAE1.560e-2656.19Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6Z1_9PHAE1.320e-2242.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KX27_9PHAE1.330e-2242.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7T5_9PHAE1.700e-1947.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A225UZJ1_9STRA1.790e-539.71Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig38280contigH-paniculata_contig38280:1410..1727 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig38280.10030.1mRNA_H-paniculata_contig38280.10030.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig38280 2..1727 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig38280.10030.1 ID=prot_H-paniculata_contig38280.10030.1|Name=mRNA_H-paniculata_contig38280.10030.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=106bp
GVRIFHLDEDFTLRTHLLAVKLFRPASELVGKVTSKLATKWVKQVLRQFR
PTEEDIAGAVTDAGTNVVSGVGWAFNWKWCIPHLLNRITTDGSGMALTKK
LSKNL*
back to top