prot_H-paniculata_contig38086.9988.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig38086.9988.1
Unique Nameprot_H-paniculata_contig38086.9988.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length38
Homology
BLAST of mRNA_H-paniculata_contig38086.9988.1 vs. uniprot
Match: A0A2D4BRF6_PYTIN (HRDC domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BRF6_PYTIN)

HSP 1 Score: 65.5 bits (158), Expect = 2.180e-11
Identity = 29/38 (76.32%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    1 FSDPIAKQVLHGSDSDILWLQRDLSLYVVNMFDTGQVS 38
            F DP   +VLHG+DSDILWLQRDL LYVVNMFDTGQ +
Sbjct:  328 FCDPARVKVLHGADSDILWLQRDLGLYVVNMFDTGQAA 365          
BLAST of mRNA_H-paniculata_contig38086.9988.1 vs. uniprot
Match: A0A7S3TXA6_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TXA6_9SPIT)

HSP 1 Score: 63.5 bits (153), Expect = 2.720e-11
Identity = 28/38 (73.68%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    1 FSDPIAKQVLHGSDSDILWLQRDLSLYVVNMFDTGQVS 38
            F+DP   +VLHGSD DILWLQRD S+YVVNMFDTGQ +
Sbjct:  100 FADPRIVKVLHGSDRDILWLQRDFSVYVVNMFDTGQAT 137          
BLAST of mRNA_H-paniculata_contig38086.9988.1 vs. uniprot
Match: A0A7S3GDX0_9EUKA (Hypothetical protein n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GDX0_9EUKA)

HSP 1 Score: 65.1 bits (157), Expect = 2.970e-11
Identity = 28/38 (73.68%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    1 FSDPIAKQVLHGSDSDILWLQRDLSLYVVNMFDTGQVS 38
            F+DP  K+V HG+DSD+LWLQRD  LYVVNMFDTGQ S
Sbjct:  262 FADPNIKKVFHGADSDMLWLQRDFGLYVVNMFDTGQAS 299          
BLAST of mRNA_H-paniculata_contig38086.9988.1 vs. uniprot
Match: D8LQE8_ECTSI (HRDC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQE8_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 4.050e-11
Identity = 28/38 (73.68%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    1 FSDPIAKQVLHGSDSDILWLQRDLSLYVVNMFDTGQVS 38
            FSDP   +V HGSDSD+LWLQRDL LY+VNMFDTGQ +
Sbjct:  382 FSDPNIVKVFHGSDSDVLWLQRDLGLYLVNMFDTGQAA 419          
BLAST of mRNA_H-paniculata_contig38086.9988.1 vs. uniprot
Match: A9V5N1_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V5N1_MONBE)

HSP 1 Score: 64.7 bits (156), Expect = 4.060e-11
Identity = 28/38 (73.68%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    1 FSDPIAKQVLHGSDSDILWLQRDLSLYVVNMFDTGQVS 38
            F+DP   +VLHG+DSDILWLQRD SLY+VNMFDTGQ +
Sbjct:  334 FADPAILKVLHGADSDILWLQRDHSLYIVNMFDTGQAT 371          
BLAST of mRNA_H-paniculata_contig38086.9988.1 vs. uniprot
Match: A0A8K1FMG7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMG7_PYTOL)

HSP 1 Score: 64.7 bits (156), Expect = 4.070e-11
Identity = 29/38 (76.32%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    1 FSDPIAKQVLHGSDSDILWLQRDLSLYVVNMFDTGQVS 38
            F DP   +VLHGSD DILWLQRDL LYVVNMFDTGQ +
Sbjct:  329 FCDPAKVKVLHGSDMDILWLQRDLGLYVVNMFDTGQAA 366          
BLAST of mRNA_H-paniculata_contig38086.9988.1 vs. uniprot
Match: UPI000900AA09 (protein RRP6-like 1 n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI000900AA09)

HSP 1 Score: 61.6 bits (148), Expect = 4.860e-11
Identity = 24/37 (64.86%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    1 FSDPIAKQVLHGSDSDILWLQRDLSLYVVNMFDTGQV 37
            F DP  K+V+HG+DSD++WLQRD  +YV N+FDTGQV
Sbjct:   93 FKDPKKKKVMHGADSDVIWLQRDFGIYVCNLFDTGQV 129          
BLAST of mRNA_H-paniculata_contig38086.9988.1 vs. uniprot
Match: A0A6G0WF79_9STRA (HRDC domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WF79_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 7.600e-11
Identity = 27/38 (71.05%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    1 FSDPIAKQVLHGSDSDILWLQRDLSLYVVNMFDTGQVS 38
            F DP   +VLHG+DSDI+WLQRDL LY+VNMFDTGQ +
Sbjct:  278 FCDPTKLKVLHGADSDIVWLQRDLGLYIVNMFDTGQAA 315          
BLAST of mRNA_H-paniculata_contig38086.9988.1 vs. uniprot
Match: UPI001FB0C6D1 (protein RRP6-like 2 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB0C6D1)

HSP 1 Score: 63.5 bits (153), Expect = 1.040e-10
Identity = 26/38 (68.42%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    1 FSDPIAKQVLHGSDSDILWLQRDLSLYVVNMFDTGQVS 38
            F DP  K+V+HGSD DILWLQRD  +Y+ NMFDTGQ S
Sbjct:  332 FKDPTKKKVIHGSDRDILWLQRDFGIYICNMFDTGQAS 369          
BLAST of mRNA_H-paniculata_contig38086.9988.1 vs. uniprot
Match: A0A2P6VL24_9CHLO (Exosome component n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VL24_9CHLO)

HSP 1 Score: 63.2 bits (152), Expect = 1.410e-10
Identity = 27/38 (71.05%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    1 FSDPIAKQVLHGSDSDILWLQRDLSLYVVNMFDTGQVS 38
            F+DP   +VLHGSDSDI+WLQRD  LY+VNMFDTGQ +
Sbjct:  306 FADPGVVKVLHGSDSDIVWLQRDYGLYIVNMFDTGQAA 343          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig38086.9988.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D4BRF6_PYTIN2.180e-1176.32HRDC domain-containing protein n=1 Tax=Pythium ins... [more]
A0A7S3TXA6_9SPIT2.720e-1173.68Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A7S3GDX0_9EUKA2.970e-1173.68Hypothetical protein n=2 Tax=Palpitomonas bilix Ta... [more]
D8LQE8_ECTSI4.050e-1173.68HRDC domain-containing protein n=2 Tax=Ectocarpus ... [more]
A9V5N1_MONBE4.060e-1173.68Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A8K1FMG7_PYTOL4.070e-1176.32Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
UPI000900AA094.860e-1164.86protein RRP6-like 1 n=1 Tax=Camelina sativa TaxID=... [more]
A0A6G0WF79_9STRA7.600e-1171.05HRDC domain-containing protein n=1 Tax=Aphanomyces... [more]
UPI001FB0C6D11.040e-1068.42protein RRP6-like 2 n=1 Tax=Impatiens glandulifera... [more]
A0A2P6VL24_9CHLO1.410e-1071.05Exosome component n=1 Tax=Micractinium conductrix ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.420.500coord: 1..38
e-value: 3.8E-13
score: 51.3
NoneNo IPR availablePANTHERPTHR12124POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATEDcoord: 1..38
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 7..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig38086contigH-paniculata_contig38086:563..676 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig38086.9988.1mRNA_H-paniculata_contig38086.9988.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig38086 563..676 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig38086.9988.1 ID=prot_H-paniculata_contig38086.9988.1|Name=mRNA_H-paniculata_contig38086.9988.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=38bp
FSDPIAKQVLHGSDSDILWLQRDLSLYVVNMFDTGQVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf