prot_H-paniculata_contig3788.9940.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3788.9940.1
Unique Nameprot_H-paniculata_contig3788.9940.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length309
Homology
BLAST of mRNA_H-paniculata_contig3788.9940.1 vs. uniprot
Match: D8LNW5_ECTSI (Proline--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNW5_ECTSI)

HSP 1 Score: 214 bits (544), Expect = 1.780e-59
Identity = 138/301 (45.85%), Postives = 175/301 (58.14%), Query Frame = 0
Query:    1 MELRAHCETSAVLKACLVAAQYVGIGSSITTKIDGSLSTTDVVLRTSN--GEVRGRTAVLRYIGRLAPDARMEGSTDFETGLVDQWIEFATNEMAYLEGTSPEAIAHAAGVISVLDQHLLAETFLACQRVTMADIAVFCAMEAAGRVAGHAS-LTPAISRWMNTCRNQSEFLLALEAHNRDSKVTTLDLNASTSRGLPDVNVEADVPKV-EPKLMAEFDQGNAALDKIKELRIEAMLYEHVAAFTVEEQGVALGSLAGVKTKNLFFKDKKAGLILVTVRHDRPCDTKTLAKLLGLAGKVSI 297
            MELRA  + SA  KACLVA +Y G+  ++   +D + +  DVVLR     G+V+G  AVLR+IG L P A + G  D E  LVD+W++FA+   A             +   + L++ L   TFLA QRVT+AD+AV C M       GHA  LTPA++RWM TC NQ  F   ++             +A               P   EPKL+  F++GN +LDK+KEL IE  L+EH  A TV EQ +AL  ++G KTKNLF KDKKAGLILVTVRHDRP D KTLAKLLG  GKVS+
Sbjct:    1 MELRASAKCSAAAKACLVAGRYAGV--TLAEVVDDTAA--DVVLRLGGDAGDVQGAEAVLRHIGGLNPSALLAGDGDAERSLVDEWLKFASTMQA----------GDVSAATAALEKRLEQNTFLAGQRVTLADVAVCCKM------IGHAEGLTPAVARWMGTCVNQPHFKAVVDGS-----------SAXXXXXXXXXXXXXXTPVFSEPKLLDGFEEGNKSLDKLKELGIEGALFEHHRAMTVPEQEMALRGVSGDKTKNLFLKDKKAGLILVTVRHDRPTDMKTLAKLLGFPGKVSL 270          
BLAST of mRNA_H-paniculata_contig3788.9940.1 vs. uniprot
Match: A0A835YT63_9STRA (Proline--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT63_9STRA)

HSP 1 Score: 171 bits (432), Expect = 4.270e-44
Identity = 114/297 (38.38%), Postives = 162/297 (54.55%), Query Frame = 0
Query:   13 LKACLVAAQYVGIGSSI---TTKIDGSLSTTDVVLRTSNGEVRGRTAVLRYIGRLAPDARMEGSTDFETGLVDQWIEFATNEMAYLEGTSPEAIAHAAGVISVLDQHLLAETFLACQRVTMADIAVFCAMEAAGRVAGHASLTPAISRWMNTCRNQSEFL-LALEAHNRDSKVTTLDLNASTSRGLPDVNVEADVPKVEPKLMAEFDQGNAALDKIKELRIEAMLYEHVAAFTVEEQGVALGSLAGVKTKNLFFKDKKAGLILVTVRHDRPCDTKTLAKLLGLAGKVSIFMRRADGQ 305
            +K  L AA+Y  +   +       +G+  T+  VL T  G +RG  AVLRY+ RL P + +EGS +F++  VDQW+EFA+NEM ++ G S  AIA    V++ L+ HL + TF+  QR+++AD+ +  A+E    V   A   PA+ R+  T  NQ  F   A +A +R SK       A  ++ L  V                 +  N A+DK+ EL + ++ Y H  A TVEEQ   +GSL G KTKNLF +DKK G+ LVT  HD P DTKT+A LL L    ++  R AD +
Sbjct:   15 VKLVLAAARYADVTVEVQEAAADAEGNNGTSTAVLTTPQGPIRGLNAVLRYVSRLRPASELEGS-NFQSSQVDQWVEFASNEMCHMAGGSASAIAQQDKVLAALEAHLASRTFVVGQRMSVADMCIAAALEG---VPLAADKQPAVCRFYGTIVNQPLFNGTAKKASSRSSK-------AGKAKQLEQVQ----------------ESENKAIDKLTELGLPSVTYAHAPAMTVEEQMQEIGSLPGAKTKNLFLRDKKHGIYLVTAAHDSPTDTKTIAALLSLPPSANL--RFADEE 282          
BLAST of mRNA_H-paniculata_contig3788.9940.1 vs. uniprot
Match: A0A7S2AQM6_9STRA (Proline--tRNA ligase n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AQM6_9STRA)

HSP 1 Score: 119 bits (298), Expect = 2.850e-26
Identity = 90/254 (35.43%), Postives = 119/254 (46.85%), Query Frame = 0
Query:   49 GEVRGRTAVLRYIGRLAPDARMEGSTDFETGLVDQWIEFATNEMA-YLEGTSPEAIAHAAGVISVLDQHLLAETFLACQRVTMADIAVFCAMEAAGRVAGHASLTPA---ISRWMNTCRNQSEFLLALEAHNRDSKVTTLDLNASTSRGLPDVNVEADVPKVEPKLMAEFDQGNAALDKIKELRIEAMLYEHVAAFTVEEQGVALGSLAGVKTKNLFFKDKKAGLILVTVRHDRPC-DTKTLAKLLGLAGKVSI 297
            G +RG  AVLRYI +       +  +D   G +D W+EFA +E+  + E  +P+ +   +  +S L   L   T+L    +T+ADIAV CA+        +A L P    + RW  TC  Q  F           K  T                    P   P L    + GN A+D +K+L IE   YEH    TV+EQ  A+GSL GV T+NL FKDKK G  LV     R   DTK LAKLL L GK ++
Sbjct:   35 GVIRGDGAVLRYIAKSKSSTSTDSISD---GKIDSWVEFAFHELQLHAEKPAPDDLVTPS--VSALGTFLENRTYLVGDSMTLADIAVCCALSR------YAVLIPTNVNVDRWFRTCTAQPSF-----------KELTQQ------------------PSAAPALAEVDETGNKAIDLLKKLDIEFKTYEHAEVKTVKEQASAVGSLPGVLTRNLLFKDKKHGFFLVVAHESRDTRDTKQLAKLLDLKGKTNL 248          
BLAST of mRNA_H-paniculata_contig3788.9940.1 vs. uniprot
Match: A0A7S0LTB1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LTB1_9EUKA)

HSP 1 Score: 89.0 bits (219), Expect = 2.530e-17
Identity = 55/148 (37.16%), Postives = 79/148 (53.38%), Query Frame = 0
Query:   43 VLRTSNGEVRGRTAVLRYIGRLAPDARMEGSTDFETGLVDQWIEFATNEMAYLEG---------------TSPEAIAHAAGVISVLDQHLLAETFLACQRVTMADIAVFCAMEAAGRV---AGHASLTPAISRWMNTCRNQSEFLLAL 172
            VL+T +G +    A+ RY+ R+  D  M GS+ +E G VDQWIEFA NE+    G                + +A    A  ++VL  HL A TFLA + VT+AD+ V C++  A ++   A + +  PA+ RW  TC +Q EFL  L
Sbjct:   55 VLQTPDGPLCEAAAIARYVARMRADTNMYGSSFYEAGCVDQWIEFAKNELDLPVGMWIYPILGFISSNAKNTEQAKTELARALAVLQTHLTAHTFLAGEGVTLADVVVVCSLLNAFKLVFDAAYLAPFPALVRWFKTCVSQPEFLAVL 202          
BLAST of mRNA_H-paniculata_contig3788.9940.1 vs. uniprot
Match: W7TR23_9STRA (Proline--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TR23_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 4.260e-16
Identity = 49/109 (44.95%), Postives = 68/109 (62.39%), Query Frame = 0
Query:  198 NVEADVPKVEPKLMAEFDQG-NAALDKIKELRIEAMLYEHVAAFTVEEQGVALGSLAGVKTKNLFFKDKKAGLILVTVRHDRPCDTKTLAKLLGLAGKVSIFMRRADGQ 305
            ++  D  ++  ++ A  + G NA+L K+KEL +   LY H    T+++Q   LG L GV TKNL  +DKK G  L+TV HDRP DTKT+AKLL L GK ++  R AD +
Sbjct:   17 SLSLDDKELAKEIEASVEVGENASLGKLKELGVSFKLYSHPETATIDKQAEHLGHLPGVLTKNLLLRDKKIGTFLITVLHDRPTDTKTIAKLLKLGGKANL--RFADEE 123          
BLAST of mRNA_H-paniculata_contig3788.9940.1 vs. uniprot
Match: A0A7S2UX57_9STRA (Proline--tRNA ligase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX57_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.210e-15
Identity = 46/83 (55.42%), Postives = 56/83 (67.47%), Query Frame = 0
Query:  215 DQGNAALDKIKELRIEAMLYEHVAAFTVEEQGVALGSLAGVKTKNLFFKDKKAGLILVTVRHDRPCDTKTLAKLLGLAGKVSI 297
            ++GN AL K++EL I    Y H  AFTVEEQ V +G LAG  TKNL  KDKK G+ +VTV HDR  +T  LAKLL L GK ++
Sbjct:   51 NEGNPALQKLEELGISFTNYSHPLAFTVEEQEVVVGHLAGELTKNLVLKDKKHGMFVVTVVHDRDVNTTVLAKLLKLPGKANM 133          
BLAST of mRNA_H-paniculata_contig3788.9940.1 vs. uniprot
Match: A0A7S4F181_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F181_CHRCT)

HSP 1 Score: 87.0 bits (214), Expect = 1.880e-15
Identity = 51/144 (35.42%), Postives = 75/144 (52.08%), Query Frame = 0
Query:   43 VLRTSNGEVRGRTAVLRYIGRLAPDARMEGSTDFETGLVDQWIEFATNEMAYLEG---------------TSPEAIAHAAGVISVLDQHLLAETFLACQRVTMADIAVFCAMEAAGRVAGHASLT---PAISRWMNTCRNQSEF 168
            VL+T+ G +    A++RY+GR+  D  M GS+ FE G VDQW+EFA NE+    G                + +A    A  + VL  HL+  T+L  + +T+AD+ V C++  A ++   A      PA+ RW  TC NQ EF
Sbjct:   73 VLQTAEGAICEAAAIVRYVGRMRADTNMYGSSFFEAGQVDQWVEFAKNELDLPVGMWIYPILGFINSNAKNTQQAKTELARALEVLQGHLVKHTYLVGEAITLADVVVSCSLLNAFKLVFDAEYLKPFPAVVRWFTTCVNQPEF 216          
BLAST of mRNA_H-paniculata_contig3788.9940.1 vs. uniprot
Match: A0A7S3UIC2_OXYMA (Hypothetical protein (Fragment) n=1 Tax=Oxyrrhis marina TaxID=2969 RepID=A0A7S3UIC2_OXYMA)

HSP 1 Score: 84.7 bits (208), Expect = 4.930e-15
Identity = 63/194 (32.47%), Postives = 98/194 (50.52%), Query Frame = 0
Query:    1 MELRAHCE--TSAVLKACLVAAQYVGIGSSITTKIDGSLSTTD---VVLRTSNGEVRGRTAVLRYIGRLAPDARMEGSTDFETGLVDQWIEFATN---EMAYLEGTSPEAIAHAAGVIS-----------VLDQHLLAETFLACQRVTMADIAVFCAM-EAAGRVAGHASLT--PAISRWMNTCRNQSEFLLAL 172
            M  R +C+  +SA LK  L+AA+Y G+   I  K+  + +       +L T  G +    A+ RY+ RL  D  + G    E+G+VD W+EFA+     ++   G S + ++  AG ++           +LD HLL   ++   ++T+ADIA+ CA+ E  G V   A L   P + RW  TC NQ EF+  L
Sbjct:   23 MPFRLYCDPKSSAGLK-ILLAARYNGVELEIPAKVTAAGAPAIGRMPILETDQGSIFSGVAIARYVARLRRDTGLYGQNFVESGVVDSWVEFASEVERPLSTWTGISSKVLSDCAGALAPAKADTDAALTILDNHLLESMYMVGHQITLADIAMCCALLEGMGSVLDPAFLQSKPNLKRWFETCINQPEFVQVL 215          
BLAST of mRNA_H-paniculata_contig3788.9940.1 vs. uniprot
Match: A0A7S4MX07_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4MX07_9EUKA)

HSP 1 Score: 82.0 bits (201), Expect = 1.290e-14
Identity = 56/148 (37.84%), Postives = 73/148 (49.32%), Query Frame = 0
Query:   43 VLRTSNGEVRGRTAVLRYIGRLAPDARMEGSTDFETGLVDQWIEFATNEM------------AYLEGTSPEAIAHAAGVI---SVLDQHLLAETFLACQRVTMADIAV-FCAMEAAGRV--AGHASLTPAISRWMNTCRNQSEFLLAL 172
            VL T +G +    A+ RY+ RL  D  M G+T FE GLVDQWIEFA NE+             ++E  +         ++   +VL+ HLL  TFL    VT AD+ V  C +     V  A   +  PA+ RW  TC NQ EFL  L
Sbjct:   69 VLETPSGCICEAAAIARYVARLRADTNMYGATFFEAGLVDQWIEFAKNELDLPVGMWIYPVLGFIESNATNTEKAKQDILRAFAVLEAHLLTSTFLVGNGVTAADVIVAMCLLNPFKLVIEAAFVAPFPALVRWFKTCINQPEFLAVL 216          
BLAST of mRNA_H-paniculata_contig3788.9940.1 vs. uniprot
Match: A0A7S2FTG1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2FTG1_9EUKA)

HSP 1 Score: 82.4 bits (202), Expect = 1.520e-14
Identity = 52/145 (35.86%), Postives = 75/145 (51.72%), Query Frame = 0
Query:   43 VLRTSNGEVRGRTAVLRYIGRLAPDARMEGSTDFETGLVDQWIEFATNEMAYLEG---------------TSPEAIAHAAGVISVLDQHLLAETFLACQRVTMADIAVFCAMEAAGRV---AGHASLTPAISRWMNTCRNQSEFL 169
            VL T  G +    A+ RY+ R+  D  M GS+ FE GLVDQWIEFA NE+    G                + +A    +  ++VL+ +LL  TFLA + +T AD+ V C++  A ++   A + +  P + RW  TC  Q EFL
Sbjct:   72 VLETPEGCLCEAAAIARYVARIRADTNMYGSSFFEAGLVDQWIEFAKNELDLPIGMWIYPILGFINSNDSNTAKAKEDVSRALAVLNAYLLTHTFLAGEGITAADVVVSCSLLNAFKLVFDADYIAPFPCVKRWFTTCVGQQEFL 216          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3788.9940.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNW5_ECTSI1.780e-5945.85Proline--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A835YT63_9STRA4.270e-4438.38Proline--tRNA ligase n=1 Tax=Tribonema minus TaxID... [more]
A0A7S2AQM6_9STRA2.850e-2635.43Proline--tRNA ligase n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S0LTB1_9EUKA2.530e-1737.16Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
W7TR23_9STRA4.260e-1644.95Proline--tRNA ligase n=2 Tax=Monodopsidaceae TaxID... [more]
A0A7S2UX57_9STRA1.210e-1555.42Proline--tRNA ligase (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S4F181_CHRCT1.880e-1535.42Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S3UIC2_OXYMA4.930e-1532.47Hypothetical protein (Fragment) n=1 Tax=Oxyrrhis m... [more]
A0A7S4MX07_9EUKA1.290e-1437.84Hypothetical protein (Fragment) n=1 Tax=Prymnesium... [more]
A0A7S2FTG1_9EUKA1.520e-1435.86Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007214YbaK/aminoacyl-tRNA synthetase-associated domainPFAMPF04073tRNA_editcoord: 238..295
e-value: 1.5E-7
score: 31.5
IPR036754YbaK/aminoacyl-tRNA synthetase-associated domain superfamilyGENE3D3.90.960.10coord: 211..300
e-value: 3.3E-14
score: 54.9
IPR036754YbaK/aminoacyl-tRNA synthetase-associated domain superfamilySUPERFAMILY55826YbaK/ProRS associated domaincoord: 220..297
NoneNo IPR availableGENE3D1.20.1050.130coord: 2..180
e-value: 1.2E-23
score: 85.7
NoneNo IPR availablePANTHERPTHR43986FAMILY NOT NAMEDcoord: 43..180
IPR004046Glutathione S-transferase, C-terminalPFAMPF00043GST_Ccoord: 105..165
e-value: 6.0E-7
score: 29.6
IPR010987Glutathione S-transferase, C-terminal-likePROSITEPS50405GST_CTERcoord: 63..184
score: 10.547
IPR036282Glutathione S-transferase, C-terminal domain superfamilySUPERFAMILY47616GST C-terminal domain-likecoord: 56..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3788contigH-paniculata_contig3788:9501..15047 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3788.9940.1mRNA_H-paniculata_contig3788.9940.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3788 9242..15157 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3788.9940.1 ID=prot_H-paniculata_contig3788.9940.1|Name=mRNA_H-paniculata_contig3788.9940.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=309bp
MELRAHCETSAVLKACLVAAQYVGIGSSITTKIDGSLSTTDVVLRTSNGE
VRGRTAVLRYIGRLAPDARMEGSTDFETGLVDQWIEFATNEMAYLEGTSP
EAIAHAAGVISVLDQHLLAETFLACQRVTMADIAVFCAMEAAGRVAGHAS
LTPAISRWMNTCRNQSEFLLALEAHNRDSKVTTLDLNASTSRGLPDVNVE
ADVPKVEPKLMAEFDQGNAALDKIKELRIEAMLYEHVAAFTVEEQGVALG
SLAGVKTKNLFFKDKKAGLILVTVRHDRPCDTKTLAKLLGLAGKVSIFMR
RADGQGYW*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007214YbaK/aa-tRNA-synth-assoc-dom
IPR036754YbaK/aa-tRNA-synt-asso_dom_sf
IPR004046GST_C
IPR010987Glutathione-S-Trfase_C-like
IPR036282Glutathione-S-Trfase_C_sf