prot_H-paniculata_contig3766.9895.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3766.9895.1
Unique Nameprot_H-paniculata_contig3766.9895.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length45
Homology
BLAST of mRNA_H-paniculata_contig3766.9895.1 vs. uniprot
Match: A0A6H5K552_9PHAE (Condensin complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K552_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 1.490e-16
Identity = 36/42 (85.71%), Postives = 39/42 (92.86%), Query Frame = 0
Query:    2 GVTVPFYFICVLHLANEKGLKLEGRDDMRDFSVSSDPVPPGS 43
            GVTVPFYFIC+LHLANEKGLKLEGRDD+ DFSV+SDPV  GS
Sbjct:  328 GVTVPFYFICLLHLANEKGLKLEGRDDLLDFSVASDPVKEGS 369          
BLAST of mRNA_H-paniculata_contig3766.9895.1 vs. uniprot
Match: D8LD70_ECTSI (Condensin complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD70_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 2.570e-15
Identity = 35/42 (83.33%), Postives = 38/42 (90.48%), Query Frame = 0
Query:    2 GVTVPFYFICVLHLANEKGLKLEGRDDMRDFSVSSDPVPPGS 43
            GVTV FYFIC+LHLANEKGLKLEGRDD+ DFSV+SDPV  GS
Sbjct:  797 GVTVSFYFICLLHLANEKGLKLEGRDDLLDFSVASDPVKEGS 838          
BLAST of mRNA_H-paniculata_contig3766.9895.1 vs. uniprot
Match: A0A3L6USJ3_9STRA (Condensin complex subunit 2 (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6USJ3_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.290e-11
Identity = 27/40 (67.50%), Postives = 32/40 (80.00%), Query Frame = 0
Query:    2 GVTVPFYFICVLHLANEKGLKLEGRDDMRDFSVSSDPVPP 41
             VTV FYFIC+LHLAN+KGL+L G+DDMRDF +  DP  P
Sbjct:   78 NVTVSFYFICMLHLANDKGLELVGQDDMRDFQILHDPSVP 117          
BLAST of mRNA_H-paniculata_contig3766.9895.1 vs. uniprot
Match: A0A6G0XUU4_9STRA (Condensin complex subunit 2 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XUU4_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.430e-10
Identity = 27/42 (64.29%), Postives = 33/42 (78.57%), Query Frame = 0
Query:    2 GVTVPFYFICVLHLANEKGLKLEGRDDMRDFSVSSDPVPPGS 43
             VTV FYFIC+LHLAN+KGL+L G+DDMRDF +  DP  P +
Sbjct:  793 NVTVSFYFICMLHLANDKGLELIGQDDMRDFKILHDPPAPST 834          
BLAST of mRNA_H-paniculata_contig3766.9895.1 vs. uniprot
Match: W4H5W8_9STRA (Condensin complex subunit 2 n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H5W8_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.950e-10
Identity = 27/40 (67.50%), Postives = 32/40 (80.00%), Query Frame = 0
Query:    2 GVTVPFYFICVLHLANEKGLKLEGRDDMRDFSVSSDPVPP 41
             VTV FYFIC+LHLAN+KGL+L G+DDMRDF +  DP  P
Sbjct:  828 NVTVSFYFICMLHLANDKGLELVGQDDMRDFQILHDPSVP 867          
BLAST of mRNA_H-paniculata_contig3766.9895.1 vs. uniprot
Match: A0A418DL85_9STRA (Condensin complex subunit 2 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418DL85_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.950e-10
Identity = 27/40 (67.50%), Postives = 32/40 (80.00%), Query Frame = 0
Query:    2 GVTVPFYFICVLHLANEKGLKLEGRDDMRDFSVSSDPVPP 41
             VTV FYFIC+LHLAN+KGL+L G+DDMRDF +  DP  P
Sbjct:  606 NVTVSFYFICMLHLANDKGLELVGQDDMRDFQILHDPSVP 645          
BLAST of mRNA_H-paniculata_contig3766.9895.1 vs. uniprot
Match: A0A485LHY8_9STRA (Condensin complex subunit 2 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LHY8_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 4.990e-10
Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    2 GVTVPFYFICVLHLANEKGLKLEGRDDMRDFSVSSDPV 39
             VTV FYFIC+LHLAN+KGL+L G+DDMRDF +  DP 
Sbjct:  809 NVTVSFYFICMLHLANDKGLELVGQDDMRDFKILHDPT 846          
BLAST of mRNA_H-paniculata_contig3766.9895.1 vs. uniprot
Match: A0A3R6WQY5_9STRA (Condensin complex subunit 2 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6WQY5_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 6.820e-10
Identity = 26/37 (70.27%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    2 GVTVPFYFICVLHLANEKGLKLEGRDDMRDFSVSSDP 38
             VTV FYFIC+LHLAN+KGL+L G+DDMRDF +  DP
Sbjct:  409 NVTVSFYFICMLHLANDKGLELVGQDDMRDFKILHDP 445          
BLAST of mRNA_H-paniculata_contig3766.9895.1 vs. uniprot
Match: A0A024UH53_9STRA (Condensin complex subunit 2 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UH53_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 6.820e-10
Identity = 26/37 (70.27%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    2 GVTVPFYFICVLHLANEKGLKLEGRDDMRDFSVSSDP 38
             VTV FYFIC+LHLAN+KGL+L G+DDMRDF +  DP
Sbjct:  829 NVTVSFYFICMLHLANDKGLELVGQDDMRDFKILHDP 865          
BLAST of mRNA_H-paniculata_contig3766.9895.1 vs. uniprot
Match: A0A833TL76_PHYIN (Condensin complex subunit 2 n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TL76_PHYIN)

HSP 1 Score: 58.5 bits (140), Expect = 9.910e-10
Identity = 24/33 (72.73%), Postives = 30/33 (90.91%), Query Frame = 0
Query:    2 GVTVPFYFICVLHLANEKGLKLEGRDDMRDFSV 34
             VTV FYFICVLHLANEKGL+L+G+DD+R+F +
Sbjct:   89 NVTVSFYFICVLHLANEKGLELKGQDDLRNFQI 121          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3766.9895.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K552_9PHAE1.490e-1685.71Condensin complex subunit 2 n=1 Tax=Ectocarpus sp.... [more]
D8LD70_ECTSI2.570e-1583.33Condensin complex subunit 2 n=1 Tax=Ectocarpus sil... [more]
A0A3L6USJ3_9STRA1.290e-1167.50Condensin complex subunit 2 (Fragment) n=3 Tax=Aph... [more]
A0A6G0XUU4_9STRA1.430e-1064.29Condensin complex subunit 2 n=1 Tax=Aphanomyces eu... [more]
W4H5W8_9STRA1.950e-1067.50Condensin complex subunit 2 n=3 Tax=Aphanomyces as... [more]
A0A418DL85_9STRA1.950e-1067.50Condensin complex subunit 2 n=1 Tax=Aphanomyces as... [more]
A0A485LHY8_9STRA4.990e-1068.42Condensin complex subunit 2 n=1 Tax=Aphanomyces st... [more]
A0A3R6WQY5_9STRA6.820e-1070.27Condensin complex subunit 2 n=1 Tax=Aphanomyces in... [more]
A0A024UH53_9STRA6.820e-1070.27Condensin complex subunit 2 n=1 Tax=Aphanomyces in... [more]
A0A833TL76_PHYIN9.910e-1072.73Condensin complex subunit 2 n=1 Tax=Phytophthora i... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022816Condensin complex subunit 2/barrenPFAMPF05786Cnd2coord: 5..35
e-value: 4.4E-10
score: 38.9
IPR022816Condensin complex subunit 2/barrenPANTHERPTHR13108FAMILY NOT NAMEDcoord: 3..37
NoneNo IPR availablePANTHERPTHR13108:SF9CONDENSIN COMPLEX SUBUNIT 2coord: 3..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3766contigH-paniculata_contig3766:2766..2900 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3766.9895.1mRNA_H-paniculata_contig3766.9895.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3766 2766..2909 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3766.9895.1 ID=prot_H-paniculata_contig3766.9895.1|Name=mRNA_H-paniculata_contig3766.9895.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=45bp
MGVTVPFYFICVLHLANEKGLKLEGRDDMRDFSVSSDPVPPGSY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022816Condensin_barren_su2