prot_H-paniculata_contig3762.9890.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3762.9890.1
Unique Nameprot_H-paniculata_contig3762.9890.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length67
Homology
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BLAST of mRNA_H-paniculata_contig3762.9890.1 vs. uniprot
Match: A0A835YTM7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTM7_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 3.570e-11
Identity = 31/52 (59.62%), Postives = 40/52 (76.92%), Query Frame = 0 
Query:   11 GKSWNAQRAVWRGTLCGRADGRITVGVCAREKKAKSKHMEAITSRLNPSKFE 62
            GK W+ +   WRG L  R+DG+ITVG+CAR+KKA+SKHM +I SR + SKFE
Sbjct:    5 GKGWDGKTITWRGKLA-RSDGKITVGICARDKKAQSKHMRSILSRFDTSKFE 55
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3762.9890.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YTM7_9STRA3.570e-1159.62Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11950coord: 27..64
e-value: 1.0E-5
score: 27.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3762contigH-paniculata_contig3762:13053..15201 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3762.9890.1mRNA_H-paniculata_contig3762.9890.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3762 12968..15376 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3762.9890.1 ID=prot_H-paniculata_contig3762.9890.1|Name=mRNA_H-paniculata_contig3762.9890.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=67bp
MLQSSPTEVMGKSWNAQRAVWRGTLCGRADGRITVGVCAREKKAKSKHME
AITSRLNPSKFEKNRQ*
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