prot_H-paniculata_contig37565.9879.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig37565.9879.1
Unique Nameprot_H-paniculata_contig37565.9879.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length78
Homology
BLAST of mRNA_H-paniculata_contig37565.9879.1 vs. uniprot
Match: A0A6A4EJA0_9STRA (Integrase catalytic domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EJA0_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 2.290e-13
Identity = 34/75 (45.33%), Postives = 53/75 (70.67%), Query Frame = 0
Query:    4 RTAEPLELVHTDRAGPVD-KPFGGCCFAIIFIDDYSRMREVYTLRQKSEALWALKQFERDVARANGLRIKRLRSD 77
            ++AE L+L+H+D  GP+  K  GGC +A++FIDD+SR   VY +++K+E L   K+F+ D+  A   +IKR+RSD
Sbjct:   15 KSAEVLDLIHSDVMGPMQTKTPGGCTYAVMFIDDFSRHVTVYFMKKKAEVLEKFKRFKADMENATERKIKRIRSD 89          
BLAST of mRNA_H-paniculata_contig37565.9879.1 vs. uniprot
Match: A0A2G2VUS6_CAPBA (Integrase catalytic domain-containing protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2VUS6_CAPBA)

HSP 1 Score: 67.4 bits (163), Expect = 2.610e-11
Identity = 36/78 (46.15%), Postives = 51/78 (65.38%), Query Frame = 0
Query:    1 RAERTAEPLELVHTDRAGPVDKP-FGGCCFAIIFIDDYSRMREVYTLRQKSEALWALKQFERDVARANGLRIKRLRSD 77
            ++ R  +PLE+VH+D AGP D P  GG  + + FIDD+SR   VY L++KSE L   K+F+  V + +G  +K LRSD
Sbjct:  835 KSRRARKPLEIVHSDLAGPFDIPSLGGNRYYLTFIDDFSRRSWVYILKEKSETLDKFKEFKAMVEKQSGYYVKILRSD 912          
BLAST of mRNA_H-paniculata_contig37565.9879.1 vs. uniprot
Match: A0A6A4AQ35_9STRA (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A4AQ35_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 3.620e-11
Identity = 33/74 (44.59%), Postives = 52/74 (70.27%), Query Frame = 0
Query:    4 RTAEPLELVHTDRAGPVD-KPFGGCCFAIIFIDDYSRMREVYTLRQKSEALWALKQFERDVARANGLRIKRLRS 76
            ++A  L+L+++D  GP+  K  GGC +A++FIDD+SR   VY +++K+E L  LK F+ D+  A G +IKR+RS
Sbjct:   87 KSAGVLDLINSDVMGPMQTKTPGGCTYAVMFIDDFSRHVTVYFMKKKAEVLEKLKMFKTDMENATGRKIKRIRS 160          
BLAST of mRNA_H-paniculata_contig37565.9879.1 vs. uniprot
Match: A0A6A2WXP0_HIBSY (Phospholipase D n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WXP0_HIBSY)

HSP 1 Score: 66.2 bits (160), Expect = 6.680e-11
Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = 0
Query:    1 RAERTAEPLELVHTDRAGPVDKP-FGGCCFAIIFIDDYSRMREVYTLRQKSEALWALKQFERDVARANGLRIKRLRSD 77
            R+ R   PLE+VHTD AGP D P  GG  + + FIDD+SR   +Y L++KSEAL  L++F+    + +G  +K LRSD
Sbjct: 1303 RSWRARRPLEIVHTDIAGPFDIPSLGGNRYYLTFIDDFSRKCWIYILKEKSEALEKLREFKAMSEKQSGQYLKILRSD 1380          
BLAST of mRNA_H-paniculata_contig37565.9879.1 vs. uniprot
Match: A0A6A3BY51_HIBSY (Histone acetyltransferase n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3BY51_HIBSY)

HSP 1 Score: 66.2 bits (160), Expect = 6.690e-11
Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = 0
Query:    1 RAERTAEPLELVHTDRAGPVDKP-FGGCCFAIIFIDDYSRMREVYTLRQKSEALWALKQFERDVARANGLRIKRLRSD 77
            R+ R   PLE+VHTD AGP D P  GG  + + FIDD+SR   +Y L++KSEAL  L++F+    + +G  +K LRSD
Sbjct:  381 RSWRARRPLEIVHTDIAGPFDIPSLGGNRYYLTFIDDFSRKCWIYILKEKSEALEKLREFKAMSEKQSGQYLKILRSD 458          
BLAST of mRNA_H-paniculata_contig37565.9879.1 vs. uniprot
Match: A0A6A4BAI9_9STRA (Integrase catalytic domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4BAI9_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 2.460e-10
Identity = 32/72 (44.44%), Postives = 49/72 (68.06%), Query Frame = 0
Query:    4 RTAEPLELVHTDRAGPVD-KPFGGCCFAIIFIDDYSRMREVYTLRQKSEALWALKQFERDVARANGLRIKRL 74
            ++A  L+L+H+D  GP   K  GGC +A++FIDD+SR   VY +++K+E L  LK F+ D+  A G +IKR+
Sbjct:  195 KSAGVLDLIHSDIMGPKQTKAPGGCTYAVMFIDDFSRHVTVYFMKKKTEVLEKLKMFKADMENATGRKIKRI 266          
BLAST of mRNA_H-paniculata_contig37565.9879.1 vs. uniprot
Match: A0A6A3H8B0_9STRA (Integrase catalytic domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3H8B0_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 3.040e-10
Identity = 32/72 (44.44%), Postives = 49/72 (68.06%), Query Frame = 0
Query:    4 RTAEPLELVHTDRAGPVD-KPFGGCCFAIIFIDDYSRMREVYTLRQKSEALWALKQFERDVARANGLRIKRL 74
            ++A  L+L+H+D  GP   K  GGC +A++FIDD+SR   VY +++K+E L  LK F+ D+  A G +IKR+
Sbjct:  195 KSAGVLDLIHSDIMGPKQTKAPGGCTYAVMFIDDFSRHVTVYFMKKKTEVLEKLKMFKADMENATGRKIKRI 266          
BLAST of mRNA_H-paniculata_contig37565.9879.1 vs. uniprot
Match: A0A5N6P8N4_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6P8N4_9ASTR)

HSP 1 Score: 64.3 bits (155), Expect = 3.130e-10
Identity = 36/71 (50.70%), Postives = 45/71 (63.38%), Query Frame = 0
Query:    8 PLELVHTDRAGPVDKP-FGGCCFAIIFIDDYSRMREVYTLRQKSEALWALKQFERDVARANGLRIKRLRSD 77
            PL+LVHTD  GPV+K   GG  + I FIDDYS+   VY ++ KSEAL   K+F     R  G ++K LRSD
Sbjct:   57 PLDLVHTDVFGPVNKKSIGGMVYMIEFIDDYSKFVWVYFMQSKSEALAKFKEFRLVAERETGRKVKVLRSD 127          
BLAST of mRNA_H-paniculata_contig37565.9879.1 vs. uniprot
Match: A0A0A1UJC6_9AGAM (Pol polyprotein/retrotransposon, putative (Fragment) n=1 Tax=Rhizoctonia solani AG-3 Rhs1AP TaxID=1086054 RepID=A0A0A1UJC6_9AGAM)

HSP 1 Score: 61.6 bits (148), Expect = 2.790e-9
Identity = 30/74 (40.54%), Postives = 48/74 (64.86%), Query Frame = 0
Query:    4 RTAEPLELVHTDRAGPVDKPFGGCCFAIIFIDDYSRMREVYTLRQKSEALWALKQFERDVARANGLRIKRLRSD 77
            R ++PLEL+H+D  GP +    G  +A++F+DDYSRM  V  L+ KS+++ A  Q    + ++ G +IK LR+D
Sbjct:  185 RASQPLELIHSDICGPHEPAVDGSRYALMFLDDYSRMLWVCFLKAKSDSMSAFIQLRAVLEKSTGFQIKTLRTD 258          
BLAST of mRNA_H-paniculata_contig37565.9879.1 vs. uniprot
Match: A0A0A1WGJ2_ZEUCU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Zeugodacus cucurbitae TaxID=28588 RepID=A0A0A1WGJ2_ZEUCU)

HSP 1 Score: 61.2 bits (147), Expect = 3.810e-9
Identity = 33/74 (44.59%), Postives = 46/74 (62.16%), Query Frame = 0
Query:    5 TAEPLELVHTDRAGPVD-KPFGGCCFAIIFIDDYSRMREVYTLRQKSEALWALKQFERDVARANGLRIKRLRSD 77
            T + LELVHTD  GP++ K  GG  + + FIDD+SRM  +Y++++KSE     K F+  V       IK+LRSD
Sbjct:  459 TKQILELVHTDVCGPINVKSVGGARYFLTFIDDFSRMIFIYSIKEKSEVFEKFKTFKNMVENQTQKTIKKLRSD 532          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig37565.9879.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A4EJA0_9STRA2.290e-1345.33Integrase catalytic domain-containing protein n=3 ... [more]
A0A2G2VUS6_CAPBA2.610e-1146.15Integrase catalytic domain-containing protein n=1 ... [more]
A0A6A4AQ35_9STRA3.620e-1144.59Integrase catalytic domain-containing protein (Fra... [more]
A0A6A2WXP0_HIBSY6.680e-1147.44Phospholipase D n=1 Tax=Hibiscus syriacus TaxID=10... [more]
A0A6A3BY51_HIBSY6.690e-1147.44Histone acetyltransferase n=2 Tax=Hibiscus syriacu... [more]
A0A6A4BAI9_9STRA2.460e-1044.44Integrase catalytic domain-containing protein n=2 ... [more]
A0A6A3H8B0_9STRA3.040e-1044.44Integrase catalytic domain-containing protein n=6 ... [more]
A0A5N6P8N4_9ASTR3.130e-1050.70Integrase catalytic domain-containing protein n=1 ... [more]
A0A0A1UJC6_9AGAM2.790e-940.54Pol polyprotein/retrotransposon, putative (Fragmen... [more]
A0A0A1WGJ2_ZEUCU3.810e-944.59Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..78
e-value: 4.5E-7
score: 31.2
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 4..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig37565contigH-paniculata_contig37565:1853..2086 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig37565.9879.1mRNA_H-paniculata_contig37565.9879.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig37565 1853..2086 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig37565.9879.1 ID=prot_H-paniculata_contig37565.9879.1|Name=mRNA_H-paniculata_contig37565.9879.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=78bp
RAERTAEPLELVHTDRAGPVDKPFGGCCFAIIFIDDYSRMREVYTLRQKS
EALWALKQFERDVARANGLRIKRLRSDQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf