prot_H-paniculata_contig3744.9856.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3744.9856.1
Unique Nameprot_H-paniculata_contig3744.9856.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length75
Homology
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BLAST of mRNA_H-paniculata_contig3744.9856.1 vs. uniprot
Match: D8LHB1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHB1_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 7.260e-18
Identity = 42/75 (56.00%), Postives = 55/75 (73.33%), Query Frame = 0 
Query:    1 GGESAIREREAAGKVQYGNTGIWEHGLGEEETPTGGTTLRANIAGLLVSIPLPPEAFCAWDRKTTSPAGYPKRSD 75
            G E+A  + + AG V+ GNTG+WEH  GE+ TPTGGT ++  IAG+ VS+PLPPEAFCAW +++ SPAG P   D
Sbjct:  280 GAEAAPGQNQGAG-VEVGNTGVWEHMEGEDGTPTGGTIMKVMIAGIEVSVPLPPEAFCAWKQRS-SPAGLPGAED 352
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BLAST of mRNA_H-paniculata_contig3744.9856.1 vs. uniprot
Match: A0A6H5L0E5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0E5_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 5.050e-15
Identity = 39/75 (52.00%), Postives = 52/75 (69.33%), Query Frame = 0 
Query:    1 GGESAIREREAAGKVQYGNTGIWEHGLGEEETPTGGTTLRANIAGLLVSIPLPPEAFCAWDRKTTSPAGYPKRSD 75
            G E+A  + + AG V+ GNTG+WEH  GE+ TPTGGT ++  IAG+ VS+PLPP+ F AW ++  SPAG P   D
Sbjct:  312 GAEAAPSQNQGAG-VEVGNTGVWEHMEGEDGTPTGGTIMKVMIAGIEVSVPLPPQTFRAWKQRA-SPAGPPGAED 384
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3744.9856.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHB1_ECTSI7.260e-1856.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L0E5_9PHAE5.050e-1552.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3744contigH-paniculata_contig3744:1573..2128 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3744.9856.1mRNA_H-paniculata_contig3744.9856.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3744 1573..2128 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3744.9856.1 ID=prot_H-paniculata_contig3744.9856.1|Name=mRNA_H-paniculata_contig3744.9856.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=75bp
GGESAIREREAAGKVQYGNTGIWEHGLGEEETPTGGTTLRANIAGLLVSI
PLPPEAFCAWDRKTTSPAGYPKRSD
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