prot_H-paniculata_contig3743.9854.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3743.9854.1
Unique Nameprot_H-paniculata_contig3743.9854.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length151
Homology
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BLAST of mRNA_H-paniculata_contig3743.9854.1 vs. uniprot
Match: A0A6H5K431_9PHAE (GT41 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K431_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 2.100e-20
Identity = 50/92 (54.35%), Postives = 60/92 (65.22%), Query Frame = 0 
Query:   60 PRDGAAEQAKDLLVIGRARLLAGDTSSSLEMFRRAADLDPRNCTAKVELGRALIACGMRMEGFESLVAAFQLDSLCPGAKDAFREYYRAEIE 151
            P +GA    + LL +GR +  AGD  S++  F RAA   PR+   + ELGRAL+  G   EGF  LVAAF +DSLCPG KD FREYYRAEIE
Sbjct:   58 PDNGA--NTERLLALGRQQTQAGDLESAVYQFERAASQAPRSAVCQTELGRALVRLGRGQEGFNCLVAAFGIDSLCPGVKDGFREYYRAEIE 147
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BLAST of mRNA_H-paniculata_contig3743.9854.1 vs. uniprot
Match: D7FH04_ECTSI (UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase, family GT41 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH04_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 9.960e-20
Identity = 49/92 (53.26%), Postives = 59/92 (64.13%), Query Frame = 0 
Query:   60 PRDGAAEQAKDLLVIGRARLLAGDTSSSLEMFRRAADLDPRNCTAKVELGRALIACGMRMEGFESLVAAFQLDSLCPGAKDAFREYYRAEIE 151
            P +GA    + LL +GR    AGD  S++  F +AA   PR+   + ELGRAL+  G   EGF  LVAAF +DSLCPG KD FREYYRAEIE
Sbjct:   58 PDNGA--NTERLLALGRQHTQAGDLESAVYQFEQAASQAPRSAVCQTELGRALVRLGRGQEGFNCLVAAFGIDSLCPGVKDGFREYYRAEIE 147
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3743.9854.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K431_9PHAE2.100e-2054.35GT41 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FH04_ECTSI9.960e-2053.26UDP-N-acetylglucosamine--peptide N-acetylglucosami... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 49..149
e-value: 2.0E-5
score: 26.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 68..139
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 68..101
score: 9.853
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 68..135
score: 9.597

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3743contigH-paniculata_contig3743:10630..11082 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3743.9854.1mRNA_H-paniculata_contig3743.9854.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3743 10333..11082 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3743.9854.1 ID=prot_H-paniculata_contig3743.9854.1|Name=mRNA_H-paniculata_contig3743.9854.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=151bp
MRVAFVVPHKFTPVPLQHYYVNSFTCSHKDIFPDFRRLQQHVTGRRCSIK
GYSHIGTISPRDGAAEQAKDLLVIGRARLLAGDTSSSLEMFRRAADLDPR
NCTAKVELGRALIACGMRMEGFESLVAAFQLDSLCPGAKDAFREYYRAEI
E
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR019734TPR_repeat
IPR013026TPR-contain_dom