prot_H-paniculata_contig3738.9845.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3738.9845.1
Unique Nameprot_H-paniculata_contig3738.9845.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length187
Homology
BLAST of mRNA_H-paniculata_contig3738.9845.1 vs. uniprot
Match: D8LID7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LID7_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 5.430e-21
Identity = 47/56 (83.93%), Postives = 50/56 (89.29%), Query Frame = 0
Query:   94 MEMQELHVEFKDDGRILLEVKGVKGEECREITEDLIKALGDVIHTENTSEYFEEKV 149
            ME+QEL V+F DDGRILLEVKGVKG ECR ITEDLIKALGDVI TENT EYF+EKV
Sbjct:   23 MELQELIVDFTDDGRILLEVKGVKGSECRVITEDLIKALGDVITTENTEEYFQEKV 78          
BLAST of mRNA_H-paniculata_contig3738.9845.1 vs. uniprot
Match: A0A6H5JNP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNP0_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 8.000e-20
Identity = 46/56 (82.14%), Postives = 50/56 (89.29%), Query Frame = 0
Query:   94 MEMQELHVEFKDDGRILLEVKGVKGEECREITEDLIKALGDVIHTENTSEYFEEKV 149
            ME+QEL V+F DDGRILLEVKGVKG ECR ITEDLIKALGDVI TENT EYF+E+V
Sbjct:   85 MELQELIVDFTDDGRILLEVKGVKGSECRVITEDLIKALGDVITTENTEEYFQERV 140          
BLAST of mRNA_H-paniculata_contig3738.9845.1 vs. uniprot
Match: A0A2I0PSC1_9EURY (Uncharacterized protein n=2 Tax=unclassified Methanomicrobiales TaxID=38064 RepID=A0A2I0PSC1_9EURY)

HSP 1 Score: 55.8 bits (133), Expect = 2.110e-7
Identity = 26/57 (45.61%), Postives = 40/57 (70.18%), Query Frame = 0
Query:   94 MEMQELHVEFKDDGRILLEVKGVKGEECREITEDLIKALGDVIHTENTSEYFEEKVT 150
            M MQEL +   ++GR+L+ V GVKGE+C  +T++L  A+GDV     +S+Y+E+ VT
Sbjct:    1 MTMQELEITIDNEGRVLIHVNGVKGEDCLALTKNLENAVGDVQERSFSSDYYEQPVT 57          
BLAST of mRNA_H-paniculata_contig3738.9845.1 vs. uniprot
Match: A0A7S0ND27_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0ND27_9EUKA)

HSP 1 Score: 53.9 bits (128), Expect = 3.500e-6
Identity = 29/62 (46.77%), Postives = 39/62 (62.90%), Query Frame = 0
Query:   88 GQQEVRMEMQELHVEFKDDGRILLEVKGVKGEECREITEDLIKALGDVIHTENTSEYFEEKV 149
            G    RMEMQEL      DGR+   V GVKG +C+++T  + + LG+V HTE T+E FE+ V
Sbjct:   30 GLSAPRMEMQELEFIIYPDGRVEERVLGVKGADCQKLTLKIEQELGEVYHTEATTEMFEQPV 91          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3738.9845.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LID7_ECTSI5.430e-2183.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JNP0_9PHAE8.000e-2082.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2I0PSC1_9EURY2.110e-745.61Uncharacterized protein n=2 Tax=unclassified Metha... [more]
A0A7S0ND27_9EUKA3.500e-646.77Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021375Protein of unknown function DUF2997PFAMPF11211DUF2997coord: 104..145
e-value: 1.7E-14
score: 53.3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3738contigH-paniculata_contig3738:10003..15191 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3738.9845.1mRNA_H-paniculata_contig3738.9845.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3738 9568..15220 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3738.9845.1 ID=prot_H-paniculata_contig3738.9845.1|Name=mRNA_H-paniculata_contig3738.9845.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=187bp
MVTCRVLRSLCMIATSSLVYPSTDGFVTTPVLSSVSSNRNAHLTMSRSSE
GLRNHSNSVRLREGAGMSIASSTALFMSDYDGGYDGGGQQEVRMEMQELH
VEFKDDGRILLEVKGVKGEECREITEDLIKALGDVIHTENTSEYFEEKVT
EANVAVLVKSGFLRTQRNKTRSDRRRAYGRVQMRYA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021375DUF2997