prot_H-paniculata_contig37371.9843.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig37371.9843.1
Unique Name	prot_H-paniculata_contig37371.9843.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	88

Homology

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BLAST of mRNA_H-paniculata_contig37371.9843.1 vs. uniprot
Match: A0A6H5JQV0_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV0_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 3.470e-31
Identity = 58/85 (68.24%), Postives = 68/85 (80.00%), Query Frame = 0

Query:    4 GTHQGWKDNSTWSRGQAWTIYAYVMVYRFLKKERFLSYSIGLLEYFEANVGSDNVPLADFDAPEDEFNPKDSSSTIIVGSALFEL 88
            GT+QGW+D+STWSRGQAW IY + MVYR+LK++RFL Y+I  L YF  N+  DNVP ADFDAP D  NPKDSS+T IV SALFEL
Sbjct:  161 GTYQGWQDDSTWSRGQAWAIYGFTMVYRYLKEQRFLDYAINTLSYFVDNLPDDNVPYADFDAPVDSDNPKDSSATAIVTSALFEL 245

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BLAST of mRNA_H-paniculata_contig37371.9843.1 vs. uniprot
Match: D7FUK3_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUK3_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 2.250e-30
Identity = 54/85 (63.53%), Postives = 65/85 (76.47%), Query Frame = 0

Query:    4 GTHQGWKDNSTWSRGQAWTIYAYVMVYRFLKKERFLSYSIGLLEYFEANVGSDNVPLADFDAPEDEFNPKDSSSTIIVGSALFEL 88
            GT+QGW+D+STWSRGQAW IY + MV+R+L ++RFL Y+I  L YF  N+  DNVP ADFD P D  NP DSS+T IV SALFEL
Sbjct:    6 GTYQGWQDDSTWSRGQAWAIYGFTMVHRYLTEQRFLDYTINTLSYFIDNLPDDNVPYADFDDPVDSDNPNDSSATAIVTSALFEL 90

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BLAST of mRNA_H-paniculata_contig37371.9843.1 vs. uniprot
Match: D7FUJ9_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ9_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 3.270e-30
Identity = 57/85 (67.06%), Postives = 67/85 (78.82%), Query Frame = 0

Query:    4 GTHQGWKDNSTWSRGQAWTIYAYVMVYRFLKKERFLSYSIGLLEYFEANVGSDNVPLADFDAPEDEFNPKDSSSTIIVGSALFEL 88
            GT+QGW+D+STWSRGQAW IY ++MV+R+L+K RFL Y I  L YF  N+  DNVP ADFDAP D  NPKDSS+T IV SALFEL
Sbjct:  219 GTYQGWQDDSTWSRGQAWAIYGFIMVHRYLQKPRFLDYGINTLSYFVDNLPDDNVPYADFDAPVDSDNPKDSSATAIVTSALFEL 303

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BLAST of mRNA_H-paniculata_contig37371.9843.1 vs. uniprot
Match: D7FQV4_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV4_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 3.230e-29
Identity = 57/85 (67.06%), Postives = 67/85 (78.82%), Query Frame = 0

Query:    4 GTHQGWKDNSTWSRGQAWTIYAYVMVYRFLKKERFLSYSIGLLEYFEANVGSDNVPLADFDAPEDEFNPKDSSSTIIVGSALFEL 88
            GT+QGW+D+STWSRGQAW +Y + MV+R+LK ERFL  SI  L YF  N+  DNVP ADFDAPE+  NPKDSS+T IV SALFEL
Sbjct:  161 GTYQGWQDDSTWSRGQAWAVYGFAMVHRYLKDERFLDRSILTLGYFVDNLPDDNVPYADFDAPENSDNPKDSSATAIVASALFEL 245

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BLAST of mRNA_H-paniculata_contig37371.9843.1 vs. uniprot
Match: A0A6H5JQR3_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQR3_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 4.020e-29
Identity = 54/87 (62.07%), Postives = 66/87 (75.86%), Query Frame = 0

Query:    2 VAGTHQGWKDNSTWSRGQAWTIYAYVMVYRFLKKERFLSYSIGLLEYFEANVGSDNVPLADFDAPEDEFNPKDSSSTIIVGSALFEL 88
            + G +QGW+D+STWSRGQAW +Y + MV+R+LKK+RFL Y+I  L YF  ++  DNVP ADFDAP D  NPKDSS T IV SAL EL
Sbjct:  116 LGGAYQGWQDDSTWSRGQAWAMYGFTMVHRYLKKQRFLEYAINTLSYFIDSLPDDNVPYADFDAPVDSDNPKDSSVTAIVTSALLEL 202

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BLAST of mRNA_H-paniculata_contig37371.9843.1 vs. uniprot
Match: D8LHN8_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHN8_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 2.170e-24
Identity = 52/86 (60.47%), Postives = 64/86 (74.42%), Query Frame = 0

Query:    4 GTHQGWKDNSTWSRGQAWTIYAYVMVYRFLKKERFLSYSIGLLEYFEANVGSDNVPLADFDAPEDEF-NPKDSSSTIIVGSALFEL 88
            GT+QG+ ++STW+RGQAW IY Y MVYRFL ++RFL  SIGLL+Y+E N+  D +P ADFDAPE    N KDSS+  IV S L EL
Sbjct:  248 GTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLKYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLEL 333

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BLAST of mRNA_H-paniculata_contig37371.9843.1 vs. uniprot
Match: A0A6H5KCI0_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI0_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 2.890e-24
Identity = 53/86 (61.63%), Postives = 64/86 (74.42%), Query Frame = 0

Query:    4 GTHQGWKDNSTWSRGQAWTIYAYVMVYRFLKKERFLSYSIGLLEYFEANVGSDNVPLADFDAPEDEF-NPKDSSSTIIVGSALFEL 88
            GT+QG+ ++STW+RGQAW IY Y MVYRFL ++RFL  SIGLLEY+E N+  D +P ADFDAPE    N KDSS+  IV S L EL
Sbjct:  285 GTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLEYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLEL 370

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BLAST of mRNA_H-paniculata_contig37371.9843.1 vs. uniprot
Match: UPI00200F5605 (glycoside hydrolase family 88 protein n=1 Tax=Agarivorans sp. TSD2052 TaxID=2937286 RepID=UPI00200F5605)

HSP 1 Score: 98.6 bits (244), Expect = 1.910e-22
Identity = 53/87 (60.92%), Postives = 61/87 (70.11%), Query Frame = 0

Query:    5 THQGWKDNSTWSRGQAWTIYAYVMVYRFLKKERFLSYSIGLLEYF-EANV--GSDNVPLADFDAPEDEFNPKDSSSTIIVGSALFEL 88
            THQGWK +STWSRGQAW++YAY M YR+   ER L  SI   EYF EA      D +P ADFDAP D+ NP+DSS+T IV SAL EL
Sbjct:  242 THQGWKADSTWSRGQAWSVYAYAMYYRYTGLERMLERSIKSYEYFIEATKLQTQDFIPYADFDAPIDDKNPRDSSATAIVASALLEL 328

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BLAST of mRNA_H-paniculata_contig37371.9843.1 vs. uniprot
Match: R9PSV9_AGAAL (Putative unsaturated glucuronyl hydrolase n=4 Tax=Agarivorans TaxID=261825 RepID=R9PSV9_AGAAL)

HSP 1 Score: 98.2 bits (243), Expect = 2.790e-22
Identity = 51/87 (58.62%), Postives = 59/87 (67.82%), Query Frame = 0

Query:    5 THQGWKDNSTWSRGQAWTIYAYVMVYRFLKKERFLSYSIGLLEYFEANVGS---DNVPLADFDAPEDEFNPKDSSSTIIVGSALFEL 88
            THQGWK  STWSRGQAW++YAY M YR+   ER L  SI   EYF  +      D VP +DFDAP D+ NP+DSS+T IV SAL EL
Sbjct:  248 THQGWKTESTWSRGQAWSVYAYAMYYRYTGLERMLERSIKSYEYFIESTKQQTQDLVPYSDFDAPIDDDNPRDSSATAIVASALIEL 334

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BLAST of mRNA_H-paniculata_contig37371.9843.1 vs. uniprot
Match: UPI001F1B9B3F (glycoside hydrolase family 88 protein n=1 Tax=Vibrio hippocampi TaxID=654686 RepID=UPI001F1B9B3F)

HSP 1 Score: 93.6 bits (231), Expect = 1.380e-20
Identity = 48/87 (55.17%), Postives = 59/87 (67.82%), Query Frame = 0

Query:    5 THQGWKDNSTWSRGQAWTIYAYVMVYRFLKKERFLSYSIGLLEYFEANVG---SDNVPLADFDAPEDEFNPKDSSSTIIVGSALFEL 88
            THQGW+ +STWSRGQAW++YAY M YRF   ER L  SI   +YF +      +D VP +DFDAP D  NPKD+S+T +V S L EL
Sbjct:  247 THQGWQTDSTWSRGQAWSVYAYAMYYRFTGLERMLERSIKSYDYFLSATQQQTNDLVPYSDFDAPIDVRNPKDTSATAVVASGLLEL 333

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig37371.9843.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig37371.9843.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JQV0_9PHAE	3.470e-31	68.24	GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
D7FUK3_ECTSI	2.250e-30	63.53	Unsaturated glucuronyl hydrolase, family GH88 n=1 ...	[more]
D7FUJ9_ECTSI	3.270e-30	67.06	Unsaturated glucuronyl hydrolase, family GH88 n=3 ...	[more]
D7FQV4_ECTSI	3.230e-29	67.06	Unsaturated glucuronyl hydrolase, family GH88 n=1 ...	[more]
A0A6H5JQR3_9PHAE	4.020e-29	62.07	GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
D8LHN8_ECTSI	2.170e-24	60.47	Unsaturated glucuronyl hydrolase, family GH88 n=1 ...	[more]
A0A6H5KCI0_9PHAE	2.890e-24	61.63	GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
UPI00200F5605	1.910e-22	60.92	glycoside hydrolase family 88 protein n=1 Tax=Agar...	[more]
R9PSV9_AGAAL	2.790e-22	58.62	Putative unsaturated glucuronyl hydrolase n=4 Tax=...	[more]
UPI001F1B9B3F	1.380e-20	55.17	glycoside hydrolase family 88 protein n=1 Tax=Vibr...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010905	Glycosyl hydrolase, family 88	PFAM	PF07470	Glyco_hydro_88	coord: 3..37 e-value: 1.4E-6 score: 27.6
IPR012341	Six-hairpin glycosidase-like superfamily	GENE3D	1.50.10.10		coord: 2..88 e-value: 1.0E-32 score: 115.4
None	No IPR available	PANTHER	PTHR36845	FAMILY NOT NAMED	coord: 4..88
IPR008928	Six-hairpin glycosidase superfamily	SUPERFAMILY	48208	Six-hairpin glycosidases	coord: 3..88

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig37371	contig	H-paniculata_contig37371:530..1220 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig37371.9843.1	mRNA_H-paniculata_contig37371.9843.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig37371 530..1220 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig37371.9843.1 ID=prot_H-paniculata_contig37371.9843.1|Name=mRNA_H-paniculata_contig37371.9843.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=88bp
FVAGTHQGWKDNSTWSRGQAWTIYAYVMVYRFLKKERFLSYSIGLLEYFE
ANVGSDNVPLADFDAPEDEFNPKDSSSTIIVGSALFEL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR010905	Glyco_hydro_88
IPR012341	6hp_glycosidase-like_sf
IPR008928	6-hairpin_glycosidase_sf