mRNA_H-paniculata_contig37371.9843.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig37371.9843.1 vs. uniprot
Match: A0A6H5JQV0_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV0_9PHAE) HSP 1 Score: 123 bits (309), Expect = 3.470e-31 Identity = 58/85 (68.24%), Postives = 68/85 (80.00%), Query Frame = 1
Query: 10 GTHQGWKDNSTWSRGQAWTIYAYVMVYRFLKKERFLSYSIGLLEYFEANVGSDNVPLADFDAPEDEFNPKDSSSTIIVGSALFEL 264
GT+QGW+D+STWSRGQAW IY + MVYR+LK++RFL Y+I L YF N+ DNVP ADFDAP D NPKDSS+T IV SALFEL
Sbjct: 161 GTYQGWQDDSTWSRGQAWAIYGFTMVYRYLKEQRFLDYAINTLSYFVDNLPDDNVPYADFDAPVDSDNPKDSSATAIVTSALFEL 245
BLAST of mRNA_H-paniculata_contig37371.9843.1 vs. uniprot
Match: D7FUK3_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUK3_ECTSI) HSP 1 Score: 114 bits (286), Expect = 2.250e-30 Identity = 54/85 (63.53%), Postives = 65/85 (76.47%), Query Frame = 1
Query: 10 GTHQGWKDNSTWSRGQAWTIYAYVMVYRFLKKERFLSYSIGLLEYFEANVGSDNVPLADFDAPEDEFNPKDSSSTIIVGSALFEL 264
GT+QGW+D+STWSRGQAW IY + MV+R+L ++RFL Y+I L YF N+ DNVP ADFD P D NP DSS+T IV SALFEL
Sbjct: 6 GTYQGWQDDSTWSRGQAWAIYGFTMVHRYLTEQRFLDYTINTLSYFIDNLPDDNVPYADFDDPVDSDNPNDSSATAIVTSALFEL 90
BLAST of mRNA_H-paniculata_contig37371.9843.1 vs. uniprot
Match: D7FUJ9_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ9_ECTSI) HSP 1 Score: 121 bits (303), Expect = 3.270e-30 Identity = 57/85 (67.06%), Postives = 67/85 (78.82%), Query Frame = 1
Query: 10 GTHQGWKDNSTWSRGQAWTIYAYVMVYRFLKKERFLSYSIGLLEYFEANVGSDNVPLADFDAPEDEFNPKDSSSTIIVGSALFEL 264
GT+QGW+D+STWSRGQAW IY ++MV+R+L+K RFL Y I L YF N+ DNVP ADFDAP D NPKDSS+T IV SALFEL
Sbjct: 219 GTYQGWQDDSTWSRGQAWAIYGFIMVHRYLQKPRFLDYGINTLSYFVDNLPDDNVPYADFDAPVDSDNPKDSSATAIVTSALFEL 303
BLAST of mRNA_H-paniculata_contig37371.9843.1 vs. uniprot
Match: D7FQV4_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV4_ECTSI) HSP 1 Score: 118 bits (296), Expect = 3.230e-29 Identity = 57/85 (67.06%), Postives = 67/85 (78.82%), Query Frame = 1
Query: 10 GTHQGWKDNSTWSRGQAWTIYAYVMVYRFLKKERFLSYSIGLLEYFEANVGSDNVPLADFDAPEDEFNPKDSSSTIIVGSALFEL 264
GT+QGW+D+STWSRGQAW +Y + MV+R+LK ERFL SI L YF N+ DNVP ADFDAPE+ NPKDSS+T IV SALFEL
Sbjct: 161 GTYQGWQDDSTWSRGQAWAVYGFAMVHRYLKDERFLDRSILTLGYFVDNLPDDNVPYADFDAPENSDNPKDSSATAIVASALFEL 245
BLAST of mRNA_H-paniculata_contig37371.9843.1 vs. uniprot
Match: A0A6H5JQR3_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQR3_9PHAE) HSP 1 Score: 115 bits (287), Expect = 4.020e-29 Identity = 54/87 (62.07%), Postives = 66/87 (75.86%), Query Frame = 1
Query: 4 VAGTHQGWKDNSTWSRGQAWTIYAYVMVYRFLKKERFLSYSIGLLEYFEANVGSDNVPLADFDAPEDEFNPKDSSSTIIVGSALFEL 264
+ G +QGW+D+STWSRGQAW +Y + MV+R+LKK+RFL Y+I L YF ++ DNVP ADFDAP D NPKDSS T IV SAL EL
Sbjct: 116 LGGAYQGWQDDSTWSRGQAWAMYGFTMVHRYLKKQRFLEYAINTLSYFIDSLPDDNVPYADFDAPVDSDNPKDSSVTAIVTSALLEL 202
BLAST of mRNA_H-paniculata_contig37371.9843.1 vs. uniprot
Match: D8LHN8_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHN8_ECTSI) HSP 1 Score: 103 bits (256), Expect = 2.170e-24 Identity = 52/86 (60.47%), Postives = 64/86 (74.42%), Query Frame = 1
Query: 10 GTHQGWKDNSTWSRGQAWTIYAYVMVYRFLKKERFLSYSIGLLEYFEANVGSDNVPLADFDAPEDEF-NPKDSSSTIIVGSALFEL 264
GT+QG+ ++STW+RGQAW IY Y MVYRFL ++RFL SIGLL+Y+E N+ D +P ADFDAPE N KDSS+ IV S L EL
Sbjct: 248 GTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLKYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLEL 333
BLAST of mRNA_H-paniculata_contig37371.9843.1 vs. uniprot
Match: A0A6H5KCI0_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI0_9PHAE) HSP 1 Score: 104 bits (260), Expect = 2.890e-24 Identity = 53/86 (61.63%), Postives = 64/86 (74.42%), Query Frame = 1
Query: 10 GTHQGWKDNSTWSRGQAWTIYAYVMVYRFLKKERFLSYSIGLLEYFEANVGSDNVPLADFDAPEDEF-NPKDSSSTIIVGSALFEL 264
GT+QG+ ++STW+RGQAW IY Y MVYRFL ++RFL SIGLLEY+E N+ D +P ADFDAPE N KDSS+ IV S L EL
Sbjct: 285 GTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLEYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLEL 370
BLAST of mRNA_H-paniculata_contig37371.9843.1 vs. uniprot
Match: UPI00200F5605 (glycoside hydrolase family 88 protein n=1 Tax=Agarivorans sp. TSD2052 TaxID=2937286 RepID=UPI00200F5605) HSP 1 Score: 98.6 bits (244), Expect = 1.910e-22 Identity = 53/87 (60.92%), Postives = 61/87 (70.11%), Query Frame = 1
Query: 13 THQGWKDNSTWSRGQAWTIYAYVMVYRFLKKERFLSYSIGLLEYF-EANV--GSDNVPLADFDAPEDEFNPKDSSSTIIVGSALFEL 264
THQGWK +STWSRGQAW++YAY M YR+ ER L SI EYF EA D +P ADFDAP D+ NP+DSS+T IV SAL EL
Sbjct: 242 THQGWKADSTWSRGQAWSVYAYAMYYRYTGLERMLERSIKSYEYFIEATKLQTQDFIPYADFDAPIDDKNPRDSSATAIVASALLEL 328
BLAST of mRNA_H-paniculata_contig37371.9843.1 vs. uniprot
Match: R9PSV9_AGAAL (Putative unsaturated glucuronyl hydrolase n=4 Tax=Agarivorans TaxID=261825 RepID=R9PSV9_AGAAL) HSP 1 Score: 98.2 bits (243), Expect = 2.790e-22 Identity = 51/87 (58.62%), Postives = 59/87 (67.82%), Query Frame = 1
Query: 13 THQGWKDNSTWSRGQAWTIYAYVMVYRFLKKERFLSYSIGLLEYFEANVGS---DNVPLADFDAPEDEFNPKDSSSTIIVGSALFEL 264
THQGWK STWSRGQAW++YAY M YR+ ER L SI EYF + D VP +DFDAP D+ NP+DSS+T IV SAL EL
Sbjct: 248 THQGWKTESTWSRGQAWSVYAYAMYYRYTGLERMLERSIKSYEYFIESTKQQTQDLVPYSDFDAPIDDDNPRDSSATAIVASALIEL 334
BLAST of mRNA_H-paniculata_contig37371.9843.1 vs. uniprot
Match: UPI001F1B9B3F (glycoside hydrolase family 88 protein n=1 Tax=Vibrio hippocampi TaxID=654686 RepID=UPI001F1B9B3F) HSP 1 Score: 93.6 bits (231), Expect = 1.380e-20 Identity = 48/87 (55.17%), Postives = 59/87 (67.82%), Query Frame = 1
Query: 13 THQGWKDNSTWSRGQAWTIYAYVMVYRFLKKERFLSYSIGLLEYFEANVG---SDNVPLADFDAPEDEFNPKDSSSTIIVGSALFEL 264
THQGW+ +STWSRGQAW++YAY M YRF ER L SI +YF + +D VP +DFDAP D NPKD+S+T +V S L EL
Sbjct: 247 THQGWQTDSTWSRGQAWSVYAYAMYYRFTGLERMLERSIKSYDYFLSATQQQTNDLVPYSDFDAPIDVRNPKDTSATAVVASGLLEL 333 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig37371.9843.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig37371.9843.1 >prot_H-paniculata_contig37371.9843.1 ID=prot_H-paniculata_contig37371.9843.1|Name=mRNA_H-paniculata_contig37371.9843.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=88bp FVAGTHQGWKDNSTWSRGQAWTIYAYVMVYRFLKKERFLSYSIGLLEYFEback to top mRNA from alignment at H-paniculata_contig37371:530..1220+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig37371.9843.1 ID=mRNA_H-paniculata_contig37371.9843.1|Name=mRNA_H-paniculata_contig37371.9843.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=691bp|location=Sequence derived from alignment at H-paniculata_contig37371:530..1220+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig37371:530..1220+ >mRNA_H-paniculata_contig37371.9843.1 ID=mRNA_H-paniculata_contig37371.9843.1|Name=mRNA_H-paniculata_contig37371.9843.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=528bp|location=Sequence derived from alignment at H-paniculata_contig37371:530..1220+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |