prot_H-paniculata_contig37160.9801.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig37160.9801.1
Unique Nameprot_H-paniculata_contig37160.9801.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length90
Homology
BLAST of mRNA_H-paniculata_contig37160.9801.1 vs. uniprot
Match: D7FJX2_ECTSI (Glutaminyl-tRNA Synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJX2_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 6.920e-23
Identity = 56/81 (69.14%), Postives = 65/81 (80.25%), Query Frame = 0
Query:    5 KSRKEEQASFAARQAAEKEAKKHIKPQDMYLSQRSIYSSFDADGVPMTDGVGQPLSKSAIKKLKKEWEKQKKLYEKAVAEA 85
            KSRKE Q    ARQAAEKEA+K + PQ+M+LS   +YS+FD  GVP TD  G+PLSKSAIKKLKKEWEKQKKLYEK +AE+
Sbjct:  585 KSRKEIQ----ARQAAEKEARKRVPPQEMFLSMTDLYSAFDDQGVPTTDKSGEPLSKSAIKKLKKEWEKQKKLYEKTLAES 661          
BLAST of mRNA_H-paniculata_contig37160.9801.1 vs. uniprot
Match: A0A6H5JZH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZH1_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 9.610e-23
Identity = 55/81 (67.90%), Postives = 65/81 (80.25%), Query Frame = 0
Query:    5 KSRKEEQASFAARQAAEKEAKKHIKPQDMYLSQRSIYSSFDADGVPMTDGVGQPLSKSAIKKLKKEWEKQKKLYEKAVAEA 85
            KSRKE Q    ARQAAEKEA+K + PQ+M+LS   +YS+FD  GVP TD  G+PLSKS+IKKLKKEWEKQKKLYEK +AE+
Sbjct:  705 KSRKEIQ----ARQAAEKEARKRVPPQEMFLSMTDLYSAFDDQGVPTTDKAGEPLSKSSIKKLKKEWEKQKKLYEKTLAES 781          
BLAST of mRNA_H-paniculata_contig37160.9801.1 vs. uniprot
Match: A0A7S3U5L5_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3U5L5_9SPIT)

HSP 1 Score: 84.7 bits (208), Expect = 6.660e-19
Identity = 46/78 (58.97%), Postives = 58/78 (74.36%), Query Frame = 0
Query:    2 APGKSRKEEQASFAARQAAEKEAKKHIKPQDMYLSQRSIYSSFDADGVPMTDGVGQPLSKSAIKKLKKEWEKQKKLYE 79
            A G+SRK+EQ    A+Q AEKE+KK + P+ M+LSQ  +YS FD DGVP     G+PL KS IKKLK+EW+KQKK+YE
Sbjct:   79 AAGRSRKDEQ----AKQLAEKESKKKLDPKKMFLSQTDLYSKFDEDGVPTNAADGEPLPKSRIKKLKQEWDKQKKVYE 152          
BLAST of mRNA_H-paniculata_contig37160.9801.1 vs. uniprot
Match: A0A7S3HDJ2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HDJ2_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.290e-16
Identity = 42/81 (51.85%), Postives = 58/81 (71.60%), Query Frame = 0
Query:    3 PGKSRKEEQASFAARQAAEKEAKKHIKPQDMYLSQRSIYSSFDADGVPMTDGVGQPLSKSAIKKLKKEWEKQKKLYEKAVA 83
            P +SRKEEQ    A+  A+K A+  I P++M+ SQ  +YS+FDA+G+P  D  G+ +SKS  KKL+K+WEKQKKL+E A A
Sbjct:   81 PNRSRKEEQ----AKALADKLARMSIAPEEMFKSQTDLYSAFDAEGIPTHDAAGEKISKSGYKKLRKDWEKQKKLFESASA 157          
BLAST of mRNA_H-paniculata_contig37160.9801.1 vs. uniprot
Match: C5KVE2_PERM5 (Cysteinyl-tRNA synthetase, putative (Fragment) n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KVE2_PERM5)

HSP 1 Score: 76.6 bits (187), Expect = 2.720e-16
Identity = 43/75 (57.33%), Postives = 53/75 (70.67%), Query Frame = 0
Query:    5 KSRKEEQASFAARQAAEKEAKKHIKPQDMYLSQRSIYSSFDADGVPMTDGVGQPLSKSAIKKLKKEWEKQKKLYE 79
            +SRKE QA+    Q AEKEAKK I+P+DM+  Q   YS FD  G+P  D  G+ L+KSA KKL KEWEKQ++LYE
Sbjct:   30 RSRKEAQAA----QLAEKEAKKKIRPEDMFKGQTDKYSKFDEHGIPTHDAGGEKLTKSAYKKLHKEWEKQRRLYE 100          
BLAST of mRNA_H-paniculata_contig37160.9801.1 vs. uniprot
Match: C5KE56_PERM5 (Glutamine--tRNA ligase n=5 Tax=Perkinsus TaxID=28000 RepID=C5KE56_PERM5)

HSP 1 Score: 80.5 bits (197), Expect = 1.020e-15
Identity = 44/76 (57.89%), Postives = 54/76 (71.05%), Query Frame = 0
Query:    4 GKSRKEEQASFAARQAAEKEAKKHIKPQDMYLSQRSIYSSFDADGVPMTDGVGQPLSKSAIKKLKKEWEKQKKLYE 79
            G+SRKE QA+    Q AEKEAKK I+P+DM+  Q   YS FD  G+P  D  G+ L+KSA KKL KEWEKQ++LYE
Sbjct:  585 GRSRKEAQAA----QLAEKEAKKKIRPEDMFKEQTDKYSQFDESGIPTHDAAGEKLAKSAYKKLHKEWEKQRRLYE 656          
BLAST of mRNA_H-paniculata_contig37160.9801.1 vs. uniprot
Match: A0A7J6SG79_PEROL (Glutamine--tRNA ligase n=9 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6SG79_PEROL)

HSP 1 Score: 80.5 bits (197), Expect = 1.030e-15
Identity = 44/75 (58.67%), Postives = 54/75 (72.00%), Query Frame = 0
Query:    4 GKSRKEEQASFAARQAAEKEAKKHIKPQDMYLSQRSIYSSFDADGVPMTDGVGQPLSKSAIKKLKKEWEKQKKLY 78
            G+SRKE QA+    Q AEKEAKK I+PQDM+  Q   YS FD +G+P  D  G+ L+KSA KKL KEWEKQ++LY
Sbjct:  586 GRSRKEAQAA----QLAEKEAKKKIRPQDMFKDQTDKYSHFDENGIPTHDAAGEKLTKSAFKKLHKEWEKQRRLY 656          
BLAST of mRNA_H-paniculata_contig37160.9801.1 vs. uniprot
Match: F0Y6F0_AURAN (Cysteine--tRNA ligase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6F0_AURAN)

HSP 1 Score: 80.1 bits (196), Expect = 1.390e-15
Identity = 41/74 (55.41%), Postives = 53/74 (71.62%), Query Frame = 0
Query:    8 KEEQASFAARQAAEKEAKKHIKPQDMYLSQRSIYSSFDADGVPMTDGVGQPLSKSAIKKLKKEWEKQKKLYEKA 81
            +EE     A + A KEA   ++PQDM+  + + Y++FDADGVP  D   +PLSKS +KKLKKEWEKQKKLY+KA
Sbjct:  584 REEAKRLDAAKKAAKEAAASVRPQDMFKDRETKYAAFDADGVPTHDAANEPLSKSLLKKLKKEWEKQKKLYDKA 657          
BLAST of mRNA_H-paniculata_contig37160.9801.1 vs. uniprot
Match: A0A7J6P5T0_PEROL (Elongation factor Ts, mitochondrial n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6P5T0_PEROL)

HSP 1 Score: 79.7 bits (195), Expect = 1.950e-15
Identity = 44/75 (58.67%), Postives = 53/75 (70.67%), Query Frame = 0
Query:    4 GKSRKEEQASFAARQAAEKEAKKHIKPQDMYLSQRSIYSSFDADGVPMTDGVGQPLSKSAIKKLKKEWEKQKKLY 78
            G+SRKE QA+    Q AEKEAKK I+PQDM+  Q   YS FD +G+P  D  G  L+KSA KKL KEWEKQ++LY
Sbjct:  517 GRSRKEAQAA----QLAEKEAKKKIRPQDMFKDQSDKYSQFDENGIPTHDAAGAKLTKSAFKKLHKEWEKQRRLY 587          
BLAST of mRNA_H-paniculata_contig37160.9801.1 vs. uniprot
Match: W7TED8_9STRA (Glutamine-trna ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TED8_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 3.540e-15
Identity = 43/76 (56.58%), Postives = 57/76 (75.00%), Query Frame = 0
Query:    4 GKSRKEEQASFAARQAAEKEAKKHIKPQDMYLSQRSIYSSFDADGVPMTDGVGQPLSKSAIKKLKKEWEKQKKLYE 79
            G+SRKEEQ    ARQ  EKEA+K++ P+DM+ ++   YS+FD DG+P  D  G  LSKS +KKLKKEWEKQK+L++
Sbjct:  586 GRSRKEEQ----ARQLLEKEARKNLDPKDMFQAETDKYSAFDEDGIPTKDVEGILLSKSLVKKLKKEWEKQKRLFD 657          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig37160.9801.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJX2_ECTSI6.920e-2369.14Glutaminyl-tRNA Synthetase n=1 Tax=Ectocarpus sili... [more]
A0A6H5JZH1_9PHAE9.610e-2367.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3U5L5_9SPIT6.660e-1958.97Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A7S3HDJ2_9STRA1.290e-1651.85Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
C5KVE2_PERM52.720e-1657.33Cysteinyl-tRNA synthetase, putative (Fragment) n=1... [more]
C5KE56_PERM51.020e-1557.89Glutamine--tRNA ligase n=5 Tax=Perkinsus TaxID=280... [more]
A0A7J6SG79_PEROL1.030e-1558.67Glutamine--tRNA ligase n=9 Tax=Perkinsus olseni Ta... [more]
F0Y6F0_AURAN1.390e-1555.41Cysteine--tRNA ligase n=1 Tax=Aureococcus anophage... [more]
A0A7J6P5T0_PEROL1.950e-1558.67Elongation factor Ts, mitochondrial n=1 Tax=Perkin... [more]
W7TED8_9STRA3.540e-1556.58Glutamine-trna ligase n=2 Tax=Monodopsidaceae TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 64..84
NoneNo IPR availableCOILSCoilCoilcoord: 5..25
NoneNo IPR availablePANTHERPTHR10890:SF3CYSTEINE--TRNA LIGASE, CYTOPLASMICcoord: 5..78
IPR024909Cysteinyl-tRNA synthetase/mycothiol ligasePANTHERPTHR10890CYSTEINYL-TRNA SYNTHETASEcoord: 5..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig37160contigH-paniculata_contig37160:1187..1701 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig37160.9801.1mRNA_H-paniculata_contig37160.9801.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig37160 267..1770 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig37160.9801.1 ID=prot_H-paniculata_contig37160.9801.1|Name=mRNA_H-paniculata_contig37160.9801.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=90bp
MAPGKSRKEEQASFAARQAAEKEAKKHIKPQDMYLSQRSIYSSFDADGVP
MTDGVGQPLSKSAIKKLKKEWEKQKKLYEKAVAEAKPSK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024909Cys-tRNA/MSH_ligase