prot_H-paniculata_contig3707.9779.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3707.9779.1
Unique Nameprot_H-paniculata_contig3707.9779.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length102
Homology
[Close]
BLAST of mRNA_H-paniculata_contig3707.9779.1 vs. uniprot
Match: A0A6H5KTL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL5_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 5.550e-17
Identity = 44/56 (78.57%), Postives = 48/56 (85.71%), Query Frame = 0 
Query:    1 MGMSSKSLKRAKSDGSNPKDVDPAEARARMDRAFTMPQFVTSVKGFGGSGRAKQVR 56
            MGMSSK+LKRAKSDG+ P DV  AEARARMDRAFTMPQFVTS  G+ GS RAK+VR
Sbjct: 1796 MGMSSKNLKRAKSDGTEPTDVTNAEARARMDRAFTMPQFVTSSAGYAGSARAKKVR 1851
[Close]
BLAST of mRNA_H-paniculata_contig3707.9779.1 vs. uniprot
Match: D8LK00_ECTSI (DEK C-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK00_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 4.890e-16
Identity = 43/56 (76.79%), Postives = 47/56 (83.93%), Query Frame = 0 
Query:    1 MGMSSKSLKRAKSDGSNPKDVDPAEARARMDRAFTMPQFVTSVKGFGGSGRAKQVR 56
            MGMSSK LKRAKSDG+ P DV  AEARARMDRAFTMPQFVTS  G+ GS RAK+V+
Sbjct: 1731 MGMSSKLLKRAKSDGTEPTDVTNAEARARMDRAFTMPQFVTSSAGYAGSARAKKVQ 1786
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3707.9779.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KTL5_9PHAE5.550e-1778.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK00_ECTSI4.890e-1676.79DEK C-terminal domain-containing protein n=1 Tax=E... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3707contigH-paniculata_contig3707:636..2106 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3707.9779.1mRNA_H-paniculata_contig3707.9779.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3707 555..2166 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3707.9779.1 ID=prot_H-paniculata_contig3707.9779.1|Name=mRNA_H-paniculata_contig3707.9779.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=102bp
MGMSSKSLKRAKSDGSNPKDVDPAEARARMDRAFTMPQFVTSVKGFGGSG
RAKQVRLSILRSAQGLIPIAHGELAGPIGLSRLRQNHRLGLEVRVYVVFQ
Q*
back to top