prot_H-paniculata_contig3704.9773.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3704.9773.1
Unique Nameprot_H-paniculata_contig3704.9773.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length123
Homology
BLAST of mRNA_H-paniculata_contig3704.9773.1 vs. uniprot
Match: D8LQT2_ECTSI (Robl_LC7 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQT2_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 8.810e-63
Identity = 113/122 (92.62%), Postives = 115/122 (94.26%), Query Frame = 0
Query:    1 SQQVNEVEEVIKELKTNPGFSAYVIMNNDGIVIKYESMEYRVAVHHAALVLDLASKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQXXXXXXXXXXXXXXGVEGEEEKKD 122
            SQQVNEVEEVIKELKTNPGFSAYVIMNNDGIVIKYESMEYR AVHHAALVLDLASKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALH++FTLVVVQ    XXXXXXXXXX  EGEEEKKD
Sbjct:    3 SQQVNEVEEVIKELKTNPGFSAYVIMNNDGIVIKYESMEYRAAVHHAALVLDLASKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHESFTLVVVQQDPNXXXXXXXXXXXXEGEEEKKD 124          
BLAST of mRNA_H-paniculata_contig3704.9773.1 vs. uniprot
Match: A0A835ZE71_9STRA (Robl_LC7 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE71_9STRA)

HSP 1 Score: 166 bits (419), Expect = 1.020e-50
Identity = 80/96 (83.33%), Postives = 88/96 (91.67%), Query Frame = 0
Query:    3 QVNEVEEVIKELKTNPGFSAYVIMNNDGIVIKYESMEYRVAVHHAALVLDLASKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQ 98
            Q NEVEEVIKELK NPGFSAYV+MNNDGIVIKYESM Y+ AVHHAALVLDL +K KKYMRE+FEPPDN+VESLRLRT EHEMI+A H+NFTLVV+Q
Sbjct:   10 QPNEVEEVIKELKKNPGFSAYVVMNNDGIVIKYESMSYQTAVHHAALVLDLVAKGKKYMREMFEPPDNEVESLRLRTEEHEMIVAQHENFTLVVIQ 105          
BLAST of mRNA_H-paniculata_contig3704.9773.1 vs. uniprot
Match: A0A7S2XUU9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUU9_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.150e-48
Identity = 79/98 (80.61%), Postives = 88/98 (89.80%), Query Frame = 0
Query:    1 SQQVNEVEEVIKELKTNPGFSAYVIMNNDGIVIKYESMEYRVAVHHAALVLDLASKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQ 98
            SQQ NEVEEVI+ELK NPGF AYVIMNNDGIVIKYE+MEY+ AVHHA LVLDL +KSKKY+RELFEPPDN+VESLRLRT ++EMIIA H NFTL V+Q
Sbjct:    3 SQQPNEVEEVIRELKKNPGFDAYVIMNNDGIVIKYENMEYKTAVHHAHLVLDLCTKSKKYIRELFEPPDNEVESLRLRTADYEMIIAQHGNFTLTVLQ 100          
BLAST of mRNA_H-paniculata_contig3704.9773.1 vs. uniprot
Match: A0A6V1PEV3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PEV3_HETAK)

HSP 1 Score: 154 bits (390), Expect = 2.270e-46
Identity = 75/98 (76.53%), Postives = 87/98 (88.78%), Query Frame = 0
Query:    1 SQQVNEVEEVIKELKTNPGFSAYVIMNNDGIVIKYESMEYRVAVHHAALVLDLASKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQ 98
            SQQ NEVEEVIKELK NPGF  YV+MNNDGIVIK E+MEY+ AVHHA LVLDL +KS+KYMR+L +PPDN+VES+RLRT ++EMIIA HDNFTLVV+Q
Sbjct:    3 SQQPNEVEEVIKELKQNPGFDGYVVMNNDGIVIKCENMEYKTAVHHAHLVLDLCAKSRKYMRDLLDPPDNEVESIRLRTIDYEMIIAQHDNFTLVVIQ 100          
BLAST of mRNA_H-paniculata_contig3704.9773.1 vs. uniprot
Match: A0A7S2SQX1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQX1_9STRA)

HSP 1 Score: 134 bits (338), Expect = 1.860e-38
Identity = 74/122 (60.66%), Postives = 90/122 (73.77%), Query Frame = 0
Query:    1 SQQVNEVEEVIKELKTNPGFSAYVIMNNDGIVIKYESMEYRVAVHHAALVLDLASKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQXXXXXXXXXXXXXXGVEGEEEKKD 122
            S Q NEV+EVI+ELK N GF +YVI+ NDGIVIKYE+M+ + AV  A LVLDL +KSKKY++ELFEPPDNDVESLRL+T E EMI+A + +++LVVVQ                EGEEEKKD
Sbjct:    3 SNQTNEVDEVIRELKQNQGFKSYVIIRNDGIVIKYENMDVQKAVQTAHLVLDLCAKSKKYIKELFEPPDNDVESLRLKTLEFEMIVAQYGDYSLVVVQDTEQHEDADAPG----EGEEEKKD 120          
BLAST of mRNA_H-paniculata_contig3704.9773.1 vs. uniprot
Match: A0A7S1XSZ1_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSZ1_9STRA)

HSP 1 Score: 134 bits (336), Expect = 3.630e-38
Identity = 68/98 (69.39%), Postives = 82/98 (83.67%), Query Frame = 0
Query:    1 SQQVNEVEEVIKELKTNPGFSAYVIMNNDGIVIKYESMEYRVAVHHAALVLDLASKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQ 98
            SQQVNE EEVIKELK  PGF +Y+I+NNDGIVIK+E+M+YR A+  A LVLDL +KSKKY+RELFE PDN+VESLRLR+   E+I+A H +FTLVV Q
Sbjct:    3 SQQVNEAEEVIKELKMVPGFHSYMILNNDGIVIKWENMQYRSAIQCAHLVLDLVAKSKKYIRELFEVPDNEVESLRLRSKNFELIVAQHGSFTLVVKQ 100          
BLAST of mRNA_H-paniculata_contig3704.9773.1 vs. uniprot
Match: A0A7S2C4Y6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C4Y6_9STRA)

HSP 1 Score: 120 bits (302), Expect = 5.500e-33
Identity = 60/96 (62.50%), Postives = 75/96 (78.12%), Query Frame = 0
Query:    3 QVNEVEEVIKELKTNPGFSAYVIMNNDGIVIKYESMEYRVAVHHAALVLDLASKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQ 98
            Q N+V+EVI +LK+N G   YVI+NNDGIVIKYE M+Y  AV HA LVLDL +KSK Y R +FE P+N+VES+RL+T E EMII+   NFTLV++Q
Sbjct:    5 QPNQVDEVIHDLKSNVGAKQYVILNNDGIVIKYEGMDYSRAVQHAYLVLDLCAKSKSYFRGMFEAPENEVESIRLKTNEFEMIISQIQNFTLVMIQ 100          
BLAST of mRNA_H-paniculata_contig3704.9773.1 vs. uniprot
Match: A0A6S8XD14_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8XD14_9STRA)

HSP 1 Score: 120 bits (301), Expect = 8.280e-33
Identity = 60/102 (58.82%), Postives = 81/102 (79.41%), Query Frame = 0
Query:    1 SQQVNEVEEVIKELKTNPGFSAYVIMNNDGIVIKYES----MEYRVAVHHAALVLDLASKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQ 98
            SQQ+NEVEE++KEL+ NPGF AY+I+NNDGIVIK++     M Y+ AV ++  VLDL +KSK ++++LFEP DN VE++RLRT E+E+I A   NFTLVV+Q
Sbjct:    3 SQQINEVEEMLKELRKNPGFKAYLILNNDGIVIKWDQEGSPMPYQKAVQYSHHVLDLCNKSKAHIKDLFEPQDNQVENIRLRTDEYELIAAQQANFTLVVIQ 104          
BLAST of mRNA_H-paniculata_contig3704.9773.1 vs. uniprot
Match: T0S3Y7_SAPDV (Robl_LC7 domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0S3Y7_SAPDV)

HSP 1 Score: 120 bits (300), Expect = 1.320e-32
Identity = 58/94 (61.70%), Postives = 76/94 (80.85%), Query Frame = 0
Query:    5 NEVEEVIKELKTNPGFSAYVIMNNDGIVIKYESMEYRVAVHHAALVLDLASKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQ 98
            NEVEE IK LK  PGF +Y++MNNDGIVIKYE+MEY++AV HA  +L+L ++SKKY+ +LF+  ++D+E LRLRT  HEMIIA +  FTLVV+Q
Sbjct:    7 NEVEETIKALKAKPGFFSYIVMNNDGIVIKYENMEYKMAVMHAYHILNLYARSKKYLTKLFDAAESDIECLRLRTKLHEMIIAQYAKFTLVVLQ 100          
BLAST of mRNA_H-paniculata_contig3704.9773.1 vs. uniprot
Match: H3H541_PHYRM (Robl_LC7 domain-containing protein n=19 Tax=Phytophthora TaxID=4783 RepID=H3H541_PHYRM)

HSP 1 Score: 118 bits (295), Expect = 9.580e-32
Identity = 57/95 (60.00%), Postives = 79/95 (83.16%), Query Frame = 0
Query:    5 NEVEEVIKELKTNPGFSAYVIMNNDGIVIKYESMEYRVAVHHAALVLDLASKSKKYMRELF-EPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQ 98
            NE+EEVIK+LK+ PGFS+Y++MNNDGIV+KYE++EY+ A+ HA  VL L  ++KK++++LF +P D+++E LRLRT  HEMIIA H  FTLVV+Q
Sbjct:    7 NEIEEVIKQLKSKPGFSSYILMNNDGIVVKYENVEYKEAIMHAYHVLSLYGRTKKHLQKLFPDPSDSEIEWLRLRTKMHEMIIAQHLRFTLVVLQ 101          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3704.9773.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQT2_ECTSI8.810e-6392.62Robl_LC7 domain-containing protein n=1 Tax=Ectocar... [more]
A0A835ZE71_9STRA1.020e-5083.33Robl_LC7 domain-containing protein n=1 Tax=Tribone... [more]
A0A7S2XUU9_9STRA1.150e-4880.61Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V1PEV3_HETAK2.270e-4676.53Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2SQX1_9STRA1.860e-3860.66Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1XSZ1_9STRA3.630e-3869.39Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2C4Y6_9STRA5.500e-3362.50Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6S8XD14_9STRA8.280e-3358.82Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
T0S3Y7_SAPDV1.320e-3261.70Robl_LC7 domain-containing protein n=4 Tax=Saprole... [more]
H3H541_PHYRM9.580e-3260.00Robl_LC7 domain-containing protein n=19 Tax=Phytop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004942Roadblock/LAMTOR2 domainSMARTSM00960Robl_LC7_a_2coord: 7..98
e-value: 1.0E-8
score: 44.9
IPR004942Roadblock/LAMTOR2 domainPFAMPF03259Robl_LC7coord: 7..98
e-value: 2.2E-14
score: 53.0
NoneNo IPR availableGENE3D3.30.450.30coord: 1..102
e-value: 4.8E-25
score: 89.4
NoneNo IPR availablePANTHERPTHR10779DYNEIN LIGHT CHAIN ROADBLOCKcoord: 2..107
NoneNo IPR availablePANTHERPTHR10779:SF18coord: 2..107
NoneNo IPR availableSUPERFAMILY103196Roadblock/LC7 domaincoord: 5..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3704contigH-paniculata_contig3704:3452..6249 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3704.9773.1mRNA_H-paniculata_contig3704.9773.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3704 3452..6249 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3704.9773.1 ID=prot_H-paniculata_contig3704.9773.1|Name=mRNA_H-paniculata_contig3704.9773.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=123bp
SQQVNEVEEVIKELKTNPGFSAYVIMNNDGIVIKYESMEYRVAVHHAALV
LDLASKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQQD
PSAKKKVEEEEEGVEGEEEKKD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004942Roadblock/LAMTOR2_dom