mRNA_H-paniculata_contig3704.9773.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3704.9773.1 vs. uniprot
Match: D8LQT2_ECTSI (Robl_LC7 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQT2_ECTSI) HSP 1 Score: 196 bits (498), Expect = 8.810e-63 Identity = 113/122 (92.62%), Postives = 115/122 (94.26%), Query Frame = 1
Query: 1 SQQVNEVEEVIKELKTNPGFSAYVIMNNDGIVIKYESMEYRVAVHHAALVLDLASKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQXXXXXXXXXXXXXXGVEGEEEKKD 366
SQQVNEVEEVIKELKTNPGFSAYVIMNNDGIVIKYESMEYR AVHHAALVLDLASKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALH++FTLVVVQ XXXXXXXXXX EGEEEKKD
Sbjct: 3 SQQVNEVEEVIKELKTNPGFSAYVIMNNDGIVIKYESMEYRAAVHHAALVLDLASKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHESFTLVVVQQDPNXXXXXXXXXXXXEGEEEKKD 124
BLAST of mRNA_H-paniculata_contig3704.9773.1 vs. uniprot
Match: A0A835ZE71_9STRA (Robl_LC7 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE71_9STRA) HSP 1 Score: 166 bits (419), Expect = 1.020e-50 Identity = 80/96 (83.33%), Postives = 88/96 (91.67%), Query Frame = 1
Query: 7 QVNEVEEVIKELKTNPGFSAYVIMNNDGIVIKYESMEYRVAVHHAALVLDLASKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQ 294
Q NEVEEVIKELK NPGFSAYV+MNNDGIVIKYESM Y+ AVHHAALVLDL +K KKYMRE+FEPPDN+VESLRLRT EHEMI+A H+NFTLVV+Q
Sbjct: 10 QPNEVEEVIKELKKNPGFSAYVVMNNDGIVIKYESMSYQTAVHHAALVLDLVAKGKKYMREMFEPPDNEVESLRLRTEEHEMIVAQHENFTLVVIQ 105
BLAST of mRNA_H-paniculata_contig3704.9773.1 vs. uniprot
Match: A0A7S2XUU9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUU9_9STRA) HSP 1 Score: 160 bits (405), Expect = 1.150e-48 Identity = 79/98 (80.61%), Postives = 88/98 (89.80%), Query Frame = 1
Query: 1 SQQVNEVEEVIKELKTNPGFSAYVIMNNDGIVIKYESMEYRVAVHHAALVLDLASKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQ 294
SQQ NEVEEVI+ELK NPGF AYVIMNNDGIVIKYE+MEY+ AVHHA LVLDL +KSKKY+RELFEPPDN+VESLRLRT ++EMIIA H NFTL V+Q
Sbjct: 3 SQQPNEVEEVIRELKKNPGFDAYVIMNNDGIVIKYENMEYKTAVHHAHLVLDLCTKSKKYIRELFEPPDNEVESLRLRTADYEMIIAQHGNFTLTVLQ 100
BLAST of mRNA_H-paniculata_contig3704.9773.1 vs. uniprot
Match: A0A6V1PEV3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PEV3_HETAK) HSP 1 Score: 154 bits (390), Expect = 2.270e-46 Identity = 75/98 (76.53%), Postives = 87/98 (88.78%), Query Frame = 1
Query: 1 SQQVNEVEEVIKELKTNPGFSAYVIMNNDGIVIKYESMEYRVAVHHAALVLDLASKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQ 294
SQQ NEVEEVIKELK NPGF YV+MNNDGIVIK E+MEY+ AVHHA LVLDL +KS+KYMR+L +PPDN+VES+RLRT ++EMIIA HDNFTLVV+Q
Sbjct: 3 SQQPNEVEEVIKELKQNPGFDGYVVMNNDGIVIKCENMEYKTAVHHAHLVLDLCAKSRKYMRDLLDPPDNEVESIRLRTIDYEMIIAQHDNFTLVVIQ 100
BLAST of mRNA_H-paniculata_contig3704.9773.1 vs. uniprot
Match: A0A7S2SQX1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQX1_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.860e-38 Identity = 74/122 (60.66%), Postives = 90/122 (73.77%), Query Frame = 1
Query: 1 SQQVNEVEEVIKELKTNPGFSAYVIMNNDGIVIKYESMEYRVAVHHAALVLDLASKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQXXXXXXXXXXXXXXGVEGEEEKKD 366
S Q NEV+EVI+ELK N GF +YVI+ NDGIVIKYE+M+ + AV A LVLDL +KSKKY++ELFEPPDNDVESLRL+T E EMI+A + +++LVVVQ EGEEEKKD
Sbjct: 3 SNQTNEVDEVIRELKQNQGFKSYVIIRNDGIVIKYENMDVQKAVQTAHLVLDLCAKSKKYIKELFEPPDNDVESLRLKTLEFEMIVAQYGDYSLVVVQDTEQHEDADAPG----EGEEEKKD 120
BLAST of mRNA_H-paniculata_contig3704.9773.1 vs. uniprot
Match: A0A7S1XSZ1_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSZ1_9STRA) HSP 1 Score: 134 bits (336), Expect = 3.630e-38 Identity = 68/98 (69.39%), Postives = 82/98 (83.67%), Query Frame = 1
Query: 1 SQQVNEVEEVIKELKTNPGFSAYVIMNNDGIVIKYESMEYRVAVHHAALVLDLASKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQ 294
SQQVNE EEVIKELK PGF +Y+I+NNDGIVIK+E+M+YR A+ A LVLDL +KSKKY+RELFE PDN+VESLRLR+ E+I+A H +FTLVV Q
Sbjct: 3 SQQVNEAEEVIKELKMVPGFHSYMILNNDGIVIKWENMQYRSAIQCAHLVLDLVAKSKKYIRELFEVPDNEVESLRLRSKNFELIVAQHGSFTLVVKQ 100
BLAST of mRNA_H-paniculata_contig3704.9773.1 vs. uniprot
Match: A0A7S2C4Y6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C4Y6_9STRA) HSP 1 Score: 120 bits (302), Expect = 5.500e-33 Identity = 60/96 (62.50%), Postives = 75/96 (78.12%), Query Frame = 1
Query: 7 QVNEVEEVIKELKTNPGFSAYVIMNNDGIVIKYESMEYRVAVHHAALVLDLASKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQ 294
Q N+V+EVI +LK+N G YVI+NNDGIVIKYE M+Y AV HA LVLDL +KSK Y R +FE P+N+VES+RL+T E EMII+ NFTLV++Q
Sbjct: 5 QPNQVDEVIHDLKSNVGAKQYVILNNDGIVIKYEGMDYSRAVQHAYLVLDLCAKSKSYFRGMFEAPENEVESIRLKTNEFEMIISQIQNFTLVMIQ 100
BLAST of mRNA_H-paniculata_contig3704.9773.1 vs. uniprot
Match: A0A6S8XD14_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8XD14_9STRA) HSP 1 Score: 120 bits (301), Expect = 8.280e-33 Identity = 60/102 (58.82%), Postives = 81/102 (79.41%), Query Frame = 1
Query: 1 SQQVNEVEEVIKELKTNPGFSAYVIMNNDGIVIKYES----MEYRVAVHHAALVLDLASKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQ 294
SQQ+NEVEE++KEL+ NPGF AY+I+NNDGIVIK++ M Y+ AV ++ VLDL +KSK ++++LFEP DN VE++RLRT E+E+I A NFTLVV+Q
Sbjct: 3 SQQINEVEEMLKELRKNPGFKAYLILNNDGIVIKWDQEGSPMPYQKAVQYSHHVLDLCNKSKAHIKDLFEPQDNQVENIRLRTDEYELIAAQQANFTLVVIQ 104
BLAST of mRNA_H-paniculata_contig3704.9773.1 vs. uniprot
Match: T0S3Y7_SAPDV (Robl_LC7 domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0S3Y7_SAPDV) HSP 1 Score: 120 bits (300), Expect = 1.320e-32 Identity = 58/94 (61.70%), Postives = 76/94 (80.85%), Query Frame = 1
Query: 13 NEVEEVIKELKTNPGFSAYVIMNNDGIVIKYESMEYRVAVHHAALVLDLASKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQ 294
NEVEE IK LK PGF +Y++MNNDGIVIKYE+MEY++AV HA +L+L ++SKKY+ +LF+ ++D+E LRLRT HEMIIA + FTLVV+Q
Sbjct: 7 NEVEETIKALKAKPGFFSYIVMNNDGIVIKYENMEYKMAVMHAYHILNLYARSKKYLTKLFDAAESDIECLRLRTKLHEMIIAQYAKFTLVVLQ 100
BLAST of mRNA_H-paniculata_contig3704.9773.1 vs. uniprot
Match: H3H541_PHYRM (Robl_LC7 domain-containing protein n=19 Tax=Phytophthora TaxID=4783 RepID=H3H541_PHYRM) HSP 1 Score: 118 bits (295), Expect = 9.580e-32 Identity = 57/95 (60.00%), Postives = 79/95 (83.16%), Query Frame = 1
Query: 13 NEVEEVIKELKTNPGFSAYVIMNNDGIVIKYESMEYRVAVHHAALVLDLASKSKKYMRELF-EPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQ 294
NE+EEVIK+LK+ PGFS+Y++MNNDGIV+KYE++EY+ A+ HA VL L ++KK++++LF +P D+++E LRLRT HEMIIA H FTLVV+Q
Sbjct: 7 NEIEEVIKQLKSKPGFSSYILMNNDGIVVKYENVEYKEAIMHAYHVLSLYGRTKKHLQKLFPDPSDSEIEWLRLRTKMHEMIIAQHLRFTLVVLQ 101 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3704.9773.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3704.9773.1 >prot_H-paniculata_contig3704.9773.1 ID=prot_H-paniculata_contig3704.9773.1|Name=mRNA_H-paniculata_contig3704.9773.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=123bp SQQVNEVEEVIKELKTNPGFSAYVIMNNDGIVIKYESMEYRVAVHHAALVback to top mRNA from alignment at H-paniculata_contig3704:3452..6249- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3704.9773.1 ID=mRNA_H-paniculata_contig3704.9773.1|Name=mRNA_H-paniculata_contig3704.9773.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2798bp|location=Sequence derived from alignment at H-paniculata_contig3704:3452..6249- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3704:3452..6249- >mRNA_H-paniculata_contig3704.9773.1 ID=mRNA_H-paniculata_contig3704.9773.1|Name=mRNA_H-paniculata_contig3704.9773.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=738bp|location=Sequence derived from alignment at H-paniculata_contig3704:3452..6249- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |