prot_H-paniculata_contig3703.9772.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3703.9772.1
Unique Nameprot_H-paniculata_contig3703.9772.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length169
Homology
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BLAST of mRNA_H-paniculata_contig3703.9772.1 vs. uniprot
Match: A0A6H5L056_9PHAE (NUC194 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L056_9PHAE)

HSP 1 Score: 214 bits (546), Expect = 2.230e-61
Identity = 105/168 (62.50%), Postives = 127/168 (75.60%), Query Frame = 0 
Query:    3 RAGHDSSAPGDRPGGGH---DHTVLLALEEMIARHFPIEDSREPVEGSEEATAFALLLRSLLAVFVRCGDLSLLELLFGTLAEGRKHLYYRWISRALDGFVAGLDLDADGVAETVFGFCLDNIATGRIALNVKAGLFDKVCLPILRRCPTEISRALYLSTSAGGAFRP 167
            + G D +       GG    D  V+ ALEEM++ HFPI++SREP EGSE+ATAFALLLR LL  FVRCGDL LLELLFGTLAEGRKH +YRW+ +ALD FV+GLD++A GVAE V GFCLD +  GR+  +V+  LFDKVCLP+LRRCP EI ++LYLS +AG  FRP
Sbjct: 1719 KQGEDGAGGAGASAGGKGKPDGLVMPALEEMMSMHFPIDNSREPEEGSEQATAFALLLRGLLGAFVRCGDLGLLELLFGTLAEGRKHRHYRWVDKALDAFVSGLDVEASGVAEAVLGFCLDKLTAGRVGASVRTVLFDKVCLPMLRRCPAEIVKSLYLSATAGSWFRP 1886
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BLAST of mRNA_H-paniculata_contig3703.9772.1 vs. uniprot
Match: D8LKP7_ECTSI (Wu:fa96e12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKP7_ECTSI)

HSP 1 Score: 171 bits (434), Expect = 2.600e-46
Identity = 81/122 (66.39%), Postives = 98/122 (80.33%), Query Frame = 0 
Query:   17 GGHDHTVLLALEEMIARHFPIEDSREPVEGSEEATAFALLLRSLLAVFVRCGDLSLLELLFGTLAEGRKHLYYRWISRALDGFVAGLDLDADGVAETVFGFCLDNIATGRIALNVKAGLFDK 138
            G  D  V+ A+EEM++ HFPI++SREP EGSE+ATAFALLLR LL  FVRCGDL LLELLFGTLAEGRKH +YRW+ +ALD FV+GLD++A GVAE V GFCLD +  GR+  +V+  LFDK
Sbjct: 2075 GKSDGLVMPAMEEMMSMHFPIDNSREPAEGSEQATAFALLLRGLLGAFVRCGDLGLLELLFGTLAEGRKHRHYRWVDKALDAFVSGLDMEASGVAEAVLGFCLDKLTAGRVGASVRTILFDK 2196
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3703.9772.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L056_9PHAE2.230e-6162.50NUC194 domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LKP7_ECTSI2.600e-4666.39Wu:fa96e12 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3703contigH-paniculata_contig3703:12269..14978 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3703.9772.1mRNA_H-paniculata_contig3703.9772.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3703 12267..14978 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3703.9772.1 ID=prot_H-paniculata_contig3703.9772.1|Name=mRNA_H-paniculata_contig3703.9772.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=169bp
HLRAGHDSSAPGDRPGGGHDHTVLLALEEMIARHFPIEDSREPVEGSEEA
TAFALLLRSLLAVFVRCGDLSLLELLFGTLAEGRKHLYYRWISRALDGFV
AGLDLDADGVAETVFGFCLDNIATGRIALNVKAGLFDKVCLPILRRCPTE
ISRALYLSTSAGGAFRPRG
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