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Homology
BLAST of mRNA_H-paniculata_contig3703.9772.1 vs. uniprot
Match: A0A6H5L056_9PHAE (NUC194 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L056_9PHAE) HSP 1 Score: 214 bits (546), Expect = 2.230e-61 Identity = 105/168 (62.50%), Postives = 127/168 (75.60%), Query Frame = 1
Query: 7 RAGHDSSAPGDRPGGGH---DHTVLLALEEMIARHFPIEDSREPVEGSEEATAFALLLRSLLAVFVRCGDLSLLELLFGTLAEGRKHLYYRWISRALDGFVAGLDLDADGVAETVFGFCLDNIATGRIALNVKAGLFDKVCLPILRRCPTEISRALYLSTSAGGAFRP 501
+ G D + GG D V+ ALEEM++ HFPI++SREP EGSE+ATAFALLLR LL FVRCGDL LLELLFGTLAEGRKH +YRW+ +ALD FV+GLD++A GVAE V GFCLD + GR+ +V+ LFDKVCLP+LRRCP EI ++LYLS +AG FRP
Sbjct: 1719 KQGEDGAGGAGASAGGKGKPDGLVMPALEEMMSMHFPIDNSREPEEGSEQATAFALLLRGLLGAFVRCGDLGLLELLFGTLAEGRKHRHYRWVDKALDAFVSGLDVEASGVAEAVLGFCLDKLTAGRVGASVRTVLFDKVCLPMLRRCPAEIVKSLYLSATAGSWFRP 1886
BLAST of mRNA_H-paniculata_contig3703.9772.1 vs. uniprot
Match: D8LKP7_ECTSI (Wu:fa96e12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKP7_ECTSI) HSP 1 Score: 171 bits (434), Expect = 2.600e-46 Identity = 81/122 (66.39%), Postives = 98/122 (80.33%), Query Frame = 1
Query: 49 GGHDHTVLLALEEMIARHFPIEDSREPVEGSEEATAFALLLRSLLAVFVRCGDLSLLELLFGTLAEGRKHLYYRWISRALDGFVAGLDLDADGVAETVFGFCLDNIATGRIALNVKAGLFDK 414
G D V+ A+EEM++ HFPI++SREP EGSE+ATAFALLLR LL FVRCGDL LLELLFGTLAEGRKH +YRW+ +ALD FV+GLD++A GVAE V GFCLD + GR+ +V+ LFDK
Sbjct: 2075 GKSDGLVMPAMEEMMSMHFPIDNSREPAEGSEQATAFALLLRGLLGAFVRCGDLGLLELLFGTLAEGRKHRHYRWVDKALDAFVSGLDMEASGVAEAVLGFCLDKLTAGRVGASVRTILFDK 2196
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 173.7 |
| Seed ortholog evalue | 7.3e-41 |
| Seed eggNOG ortholog | 2880.D8LKP7 |
| KEGG ko | ko:K06642,ko:K07203,ko:K08873 |
| KEGG Pathway | ko01521,ko01522,ko03015,ko03450,ko04012,ko04066,ko04072,ko04110,ko04136,ko04138,ko04139,ko04140,ko04150,ko04151,ko04152,ko04211,ko04212,ko04213,ko04218,ko04371,ko04630,ko04659,ko04714,ko04910,ko04919,ko04920,ko04930,ko04931,ko05165,ko05167,ko05200,ko05205,ko05206,ko05210,ko05212,ko05214,ko05215,ko05221,ko05224,ko05225,ko05226,ko05230,ko05231,map01521,map01522,map03015,map03450,map04012,map04066,map04072,map04110,map04136,map04138,map04139,map04140,map04150,map04151,map04152,map04211,map04212,map04213,map04218,map04371,map04630,map04659,map04714,map04910,map04919,map04920,map04930,map04931,map05165,map05167,map05200,map05205,map05206,map05210,map05212,map05214,map05215,map05221,map05224,map05225,map05226,map05230,map05231 |
| KEGG Module | M00297 |
| Hectar predicted targeting category | other localisation |
| EggNOG free text desc. | phosphatidylinositol kinase activity |
| EggNOG OGs | COG5032@1,KOG0891@2759 |
| EC | 2.7.11.1 |
| COG Functional cat. | BDLTU |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01001,ko03019,ko03032,ko03400,ko04131 |
| Exons | 4 |
| Model size | 511 |
| Cds size | 507 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3703.9772.1 >prot_H-paniculata_contig3703.9772.1 ID=prot_H-paniculata_contig3703.9772.1|Name=mRNA_H-paniculata_contig3703.9772.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=169bp
HLRAGHDSSAPGDRPGGGHDHTVLLALEEMIARHFPIEDSREPVEGSEEA
TAFALLLRSLLAVFVRCGDLSLLELLFGTLAEGRKHLYYRWISRALDGFV
AGLDLDADGVAETVFGFCLDNIATGRIALNVKAGLFDKVCLPILRRCPTE
ISRALYLSTSAGGAFRPRG back to topmRNA from alignment at H-paniculata_contig3703:12267..14978- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig3703.9772.1 ID=mRNA_H-paniculata_contig3703.9772.1|Name=mRNA_H-paniculata_contig3703.9772.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2712bp|location=Sequence derived from alignment at H-paniculata_contig3703:12267..14978- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CACTTGAGAGCGGGGCATGACAGTAGTGCGCCAGGGGACAGGCCGGGAGG
AGGGCATGATCATACGGTTTTGCTCGCGCTTGAGGAGATGATCGCCAGGC
ACTTTCCGATCGAGGACAGTCGAGAGCCAGTGGAGGGGTCTGAGGAAGCG
ACTGCGTTCGCTCTGCTGTTGCGGAGCTTACTTGCTGTCTTCGTTAGGTG
GGACAGGGGACAGGCAACCAGAACTTAAAAAAATCGACACAAAAGCCCCA
ATGTTCGAAAGCTGCAATTATTATTTCAGAAATGGAATTTATGGCGAAAA
GTAGTGAATAACGTTTCGGTTGATTTTTTTATTCGAAGTTGAAATAGGTA
TGGTGAAGTTTGCGAGGGATCGGTGCCACGATATCGGTTCCGGTAACCGC
CTGGGTGACAACAAGATCGAAAGACTCAAAGGCAGATGGCCACGGGGGTT
CTTTGTACTAGCTTAACAATTTTGCGTCCGTGTTTTTACGCAACCGAAAG
AACAATAGACAGGTGACCACGAGGGTTCTTTCCGCTAGCTTGCCAGCCTC
GCGTCCGTTTTTTTACGTTGCCAAGGGCTGGAAATATCTGTACATGTTGT
ATGGAGTTTGATCATGTTGTTGGCAACCTCGCAGTCGTTGCACAATTTTC
GATGGCCTGTCGACAACGTCGGACGTTGTGCCTCTTGTCTCAAGTTTCCC
TAAGATTCCCCCTATGGCCACCCGTGTAATAGTCACCTCGATTTACGTTT
TTGTTCTCTCGTTTTCCACATTGCCTCCGTTTAATATTGTTTCTATTACT
AATTATTTTCCAGTCATCATCCCTTGTACAGCTGAAACGTATTACTTTGT
TTTTTTCCACTGATTGTGTTTTCAGCTGACCTCAGTAATTTGTAAACCGT
TCGTGACATGTGGCGATAAACGTCGTGCTTTTGCAGCATCTGAACGAATA
GTGTACGCAGTAGTATCATGCAACGACCATAATATTGATAGTAGCTGCCT
GGTTTGGTGTGTTGTTGTCAATTTTCCCAAGGTGTGGAGATCTGAGCTTA
CTGGAATTGCTATTCGGAACGCTGGCGGAGGGACGCAAGCATCTATACTA
CAGGCGAGAGTTCCTGCAGCGCTATGTGCCTAATGTTTTCAACATGTACC
GAATCGTTGGCGCGTCTGGTAGCTCACCTAGTAAACATCACCCGTGTGAC
CCCGCTCCTTGTTCCTCGGTTGCGGGATATAGCTGATTTTCTCCCATCAT
TGGATGATGACCTTGCGGGTCGAATAACTGTGACATGATAAAATCTTATT
CAGGACGATGAACGACCCTCGAAAAGCGGTTCCACCATTTTTGGGGGTGT
TAAAATTCCGTTTCCGTCCACTTGCGAAGGATAAACGGGCAGTTTGCAGT
CGAAAATAACTTCAGGGTTGCAGGCAAAAAAACACAAATTGAGGCCCATT
GTTTTTCAAGAGCACTTTTTCTTCGTATCCGAGAAACCCACCCCCCCAAA
CATCGGAAGGATCGATATTTCTACAAAAGATTTGCCTCCGGCGGCTAATC
GGCTCCCCCGCTATAAAGCACGTGTTGAGCGCATCTCGGATGGTTGGGTC
GTTTAACGGCCCAAGTAAAGTTGACAGTGGTACGGCAAGGCCGGAGCCAA
AGTGGGGGGGACACCACGTATACTGGGGAACACGGTAATGTCAAGTTAGG
CGGTTGTTCCCTCTGGTCACCTTTAGTAGCGCTTGCCGTTGAGAGGTCAA
TGCGTTCTATTGGACTCATTACCGCCGCACCTGTCCAGTCCAGTCCCAAT
GATAATTATCGACGTGCGGAGTGTGACATTTTTCATAACTGGACCTAAAC
TGTAGCGACGCACGGTGCGTGCCAGCCAACAGAGTTCACTGGAATACTGT
GTCAAGAACGGGCGAGAGCACATCGTGGTATTCAGTACGGGATTGATTGC
CTGCTTTTTAACGCATGTGGTGGTTTTGACAAGAGTTCGCGAGTTCGTGA
TTCGTCGTTCAGCAAGAGTATTGAGTTTTCTCCTTGCTACCTTCGCAAGC
TTCGCCCAGTTTCGCGTGGTTGCAATCGATATTGAACAATGGGACAGGTG
GATTTCCAGGGCCCTGGATGGCTTCGTGGCGGGACTGGACCTGGATGCTG
ATGGTGTAGCAGAGACTGTATTCGGCTTCTGCCTCGACAATATAGCAACT
GGTAGAATAGCCCTTAACGTCAAGGCTGGGCTTTTTGACAAGGTAACTAA
AAACTATGGTTCAAGGAATCTATCTCATGCCGAGCTTTATGTCCGCCGTG
AGAGAATGGGTCGTGGAGAATGCAGGCTTGTTTGTGTAGTAGTGGGTATT
ATGTGGGCTTGGTTTTAGTGCTTCTGTAACGTACGTCGTTGTGGCACAGG
ATGACAACACGATTGTCAGGTGGGCTTCATGAACGTCTGGGAGGGTACTG
TTGCGACAAAATACAGTGCTGCCGTGTCTCTCCGAGTTCAGTACGTCATC
TATACGACCGCGTAGCCAGCACCACCGAGGATCCTTCGTTGCGACGAGGT
GAAGTGTCGCCGTTTTTCAGGTGTTCTTTTTTCTTTTCATGCTTCTTTCT
TACAACTGTATACACAGGTTTGTCTGCCAATTCTAAGGCGTTGTCCTACG
GAAATTTCTCGCGCTCTGTACCTCTCTACGAGCGCTGGAGGGGCGTTTCG
TCCGAGAGGGGC back to topCoding sequence (CDS) from alignment at H-paniculata_contig3703:12267..14978- >mRNA_H-paniculata_contig3703.9772.1 ID=mRNA_H-paniculata_contig3703.9772.1|Name=mRNA_H-paniculata_contig3703.9772.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1014bp|location=Sequence derived from alignment at H-paniculata_contig3703:12267..14978- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CACTTGAGAGCGGGGCATGACAGTAGTGCGCCAGGGGACAGGCCGGGAGG
AGGGCATGATCATACGGTTTTGCTCGCGCTTGAGGAGATGATCGCCAGGC
ACTTTCCGATCGAGGACAGTCGAGAGCCAGTGGAGGGGTCTGAGGAAGCG
ACTGCGTTCGCTCTGCTGTTGCGGAGCTTACTTGCTGTCTTCGTTAGCAC
TTGAGAGCGGGGCATGACAGTAGTGCGCCAGGGGACAGGCCGGGAGGAGG
GCATGATCATACGGTTTTGCTCGCGCTTGAGGAGATGATCGCCAGGCACT
TTCCGATCGAGGACAGTCGAGAGCCAGTGGAGGGGTCTGAGGAAGCGACT
GCGTTCGCTCTGCTGTTGCGGAGCTTACTTGCTGTCTTCGTTAGGTGTGG
AGATCTGAGCTTACTGGAATTGCTATTCGGAACGCTGGCGGAGGGACGCA
AGCATCTATACTACAGGTGTGGAGATCTGAGCTTACTGGAATTGCTATTC
GGAACGCTGGCGGAGGGACGCAAGCATCTATACTACAGGTGGATTTCCAG
GGCCCTGGATGGCTTCGTGGCGGGACTGGACCTGGATGCTGATGGTGTAG
CAGAGACTGTATTCGGCTTCTGCCTCGACAATATAGCAACTGGTAGAATA
GCCCTTAACGTCAAGGCTGGGCTTTTTGACAAGGTGGATTTCCAGGGCCC
TGGATGGCTTCGTGGCGGGACTGGACCTGGATGCTGATGGTGTAGCAGAG
ACTGTATTCGGCTTCTGCCTCGACAATATAGCAACTGGTAGAATAGCCCT
TAACGTCAAGGCTGGGCTTTTTGACAAGGTTTGTCTGCCAATTCTAAGGC
GTTGTCCTACGGAAATTTCTCGCGCTCTGTACCTCTCTACGAGCGCTGGA
GGGGCGTTTCGTCCGAGAGGGGTTTGTCTGCCAATTCTAAGGCGTTGTCC
TACGGAAATTTCTCGCGCTCTGTACCTCTCTACGAGCGCTGGAGGGGCGT
TTCGTCCGAGAGGG back to top
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