prot_H-paniculata_contig36987.9760.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig36987.9760.1
Unique Nameprot_H-paniculata_contig36987.9760.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length91
Homology
BLAST of mRNA_H-paniculata_contig36987.9760.1 vs. uniprot
Match: A0A6H5J951_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J951_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 1.930e-33
Identity = 69/89 (77.53%), Postives = 80/89 (89.89%), Query Frame = 0
Query:    1 MSSVPYDEDGVAGGAAAAREEKRLARRRERLGRGEVMETVREEFGDQPEAVRAVGNAGRSGVSEAKMKRLLDEDKERLDFEEDHMVRLV 89
            ++S+PYDEDG++ GAA  R EKRL RRR++L RGEVMET+REEFG+QPE VRAVGNAG SGVSEAKMK+LL+EDKERLDFEEDHMVRL 
Sbjct:  304 LASMPYDEDGLSTGAA--RGEKRLERRRDKLRRGEVMETLREEFGEQPETVRAVGNAGASGVSEAKMKKLLEEDKERLDFEEDHMVRLT 390          
BLAST of mRNA_H-paniculata_contig36987.9760.1 vs. uniprot
Match: A0A836CGQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGQ1_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 3.690e-10
Identity = 34/66 (51.52%), Postives = 49/66 (74.24%), Query Frame = 0
Query:   23 RLARRRERLGRGEVMETVREEFGDQPEAVRAVGNAGRSGVSEAKMKRLLDEDKERLDFEEDHMVRL 88
            R+ RRR+R   GE++ET+REEFGD+PE VR  G +G   V++   ++L  E++ER +FEEDHM+RL
Sbjct:  239 RVERRRDRARTGEILETLREEFGDRPEVVRGGGGSGM--VNDQARRKLDREERERREFEEDHMIRL 302          
BLAST of mRNA_H-paniculata_contig36987.9760.1 vs. uniprot
Match: A0A835ZC79_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC79_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 4.780e-10
Identity = 32/58 (55.17%), Postives = 44/58 (75.86%), Query Frame = 0
Query:    1 MSSVPYDEDGVAGGAAAAREEKRLARRRERLGRGEVMETVREEFGDQPEAVRAVGNAG 58
            M++VPY+EDG AG     R+E+R+ RRR+R   GE++ET+REEFGD+PE VR  G +G
Sbjct:  230 MAAVPYEEDGAAG--TRRRDERRVERRRDRARTGEILETLREEFGDRPEVVRGGGGSG 285          
BLAST of mRNA_H-paniculata_contig36987.9760.1 vs. uniprot
Match: A0A835YU38_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU38_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 5.030e-10
Identity = 32/58 (55.17%), Postives = 44/58 (75.86%), Query Frame = 0
Query:    1 MSSVPYDEDGVAGGAAAAREEKRLARRRERLGRGEVMETVREEFGDQPEAVRAVGNAG 58
            M++VPY+EDG AG     R+E+R+ RRR+R   GE++ET+REEFGD+PE VR  G +G
Sbjct:  230 MAAVPYEEDGAAG--TRRRDERRVERRRDRARTGEILETLREEFGDRPEVVRGGGGSG 285          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig36987.9760.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5J951_9PHAE1.930e-3377.53Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CGQ1_9STRA3.690e-1051.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZC79_9STRA4.780e-1055.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YU38_9STRA5.030e-1055.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 71..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig36987contigH-paniculata_contig36987:1307..1941 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig36987.9760.1mRNA_H-paniculata_contig36987.9760.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig36987 1295..1941 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig36987.9760.1 ID=prot_H-paniculata_contig36987.9760.1|Name=mRNA_H-paniculata_contig36987.9760.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=91bp
MSSVPYDEDGVAGGAAAAREEKRLARRRERLGRGEVMETVREEFGDQPEA
VRAVGNAGRSGVSEAKMKRLLDEDKERLDFEEDHMVRLVR*
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