mRNA_H-paniculata_contig36987.9760.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig36987.9760.1 vs. uniprot
Match: A0A6H5J951_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J951_9PHAE) HSP 1 Score: 135 bits (341), Expect = 8.240e-36 Identity = 72/93 (77.42%), Postives = 84/93 (90.32%), Query Frame = 1
Query: 1 RAPKMSSVPYDEDGVAGGAAAAREEKRLARRRERLGRGEVMETVREEFGDQPEAVRAVGNAGRSGVSEAKMKRLLDEDKERLDFEEDHMVRLV 279
RAP+++S+PYDEDG++ G AAR EKRL RRR++L RGEVMET+REEFG+QPE VRAVGNAG SGVSEAKMK+LL+EDKERLDFEEDHMVRL
Sbjct: 300 RAPRLASMPYDEDGLSTG--AARGEKRLERRRDKLRRGEVMETLREEFGEQPETVRAVGNAGASGVSEAKMKKLLEEDKERLDFEEDHMVRLT 390
BLAST of mRNA_H-paniculata_contig36987.9760.1 vs. uniprot
Match: A0A835ZC79_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC79_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 3.600e-12 Identity = 35/62 (56.45%), Postives = 48/62 (77.42%), Query Frame = 1
Query: 1 RAPKMSSVPYDEDGVAGGAAAAREEKRLARRRERLGRGEVMETVREEFGDQPEAVRAVGNAG 186
RAP+M++VPY+EDG AG R+E+R+ RRR+R GE++ET+REEFGD+PE VR G +G
Sbjct: 226 RAPRMAAVPYEEDGAAG--TRRRDERRVERRRDRARTGEILETLREEFGDRPEVVRGGGGSG 285
BLAST of mRNA_H-paniculata_contig36987.9760.1 vs. uniprot
Match: A0A835YU38_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU38_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 3.970e-12 Identity = 35/62 (56.45%), Postives = 48/62 (77.42%), Query Frame = 1
Query: 1 RAPKMSSVPYDEDGVAGGAAAAREEKRLARRRERLGRGEVMETVREEFGDQPEAVRAVGNAG 186
RAP+M++VPY+EDG AG R+E+R+ RRR+R GE++ET+REEFGD+PE VR G +G
Sbjct: 226 RAPRMAAVPYEEDGAAG--TRRRDERRVERRRDRARTGEILETLREEFGDRPEVVRGGGGSG 285
BLAST of mRNA_H-paniculata_contig36987.9760.1 vs. uniprot
Match: A0A836CGQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGQ1_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 4.270e-10 Identity = 34/66 (51.52%), Postives = 49/66 (74.24%), Query Frame = 1
Query: 79 RLARRRERLGRGEVMETVREEFGDQPEAVRAVGNAGRSGVSEAKMKRLLDEDKERLDFEEDHMVRL 276
R+ RRR+R GE++ET+REEFGD+PE VR G +G V++ ++L E++ER +FEEDHM+RL
Sbjct: 239 RVERRRDRARTGEILETLREEFGDRPEVVRGGGGSGM--VNDQARRKLDREERERREFEEDHMIRL 302
BLAST of mRNA_H-paniculata_contig36987.9760.1 vs. uniprot
Match: A0A067CYY5_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CYY5_SAPPC) HSP 1 Score: 55.8 bits (133), Expect = 5.200e-7 Identity = 36/93 (38.71%), Postives = 54/93 (58.06%), Query Frame = 1
Query: 1 RAPKMSSVPYDEDGVAGGAAAAREEKRLARRRERLGRGEVMETVREEFGDQPEAVRAVGNAGRSGVSEAKMKRLLDEDKERLDFEEDHMVRLV 279
RAP+M+SVPYDE+ A R+E R R+RL + ++ VREE+ ++P+ + G S A K L +E +E+ D+EE+ VRLV
Sbjct: 153 RAPRMASVPYDEEEKEADKKAKRDE----RNRKRLAKSTILSEVREEYSERPQEILTSG-------SSALDKELANEAREKTDYEEERFVRLV 234
BLAST of mRNA_H-paniculata_contig36987.9760.1 vs. uniprot
Match: A0A5D6XJV1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJV1_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 2.690e-6 Identity = 36/93 (38.71%), Postives = 54/93 (58.06%), Query Frame = 1
Query: 1 RAPKMSSVPYDEDGVAGGAAAAREEKRLARRRERLGRGEVMETVREEFGDQPEAVRAVGNAGRSGVSEAKMKRLLDEDKERLDFEEDHMVRLV 279
RAP+++SVPYDE+ AA++ KR R R+R+ + ++ +REEF ++P + A G S A K L E+ E+ D+EE VRLV
Sbjct: 153 RAPRLASVPYDEEEKE----AAKKAKREERNRKRMQKSTILSELREEFSERPTEIFA-------GGSSAVDKELAREEAEKKDYEESRFVRLV 234
BLAST of mRNA_H-paniculata_contig36987.9760.1 vs. uniprot
Match: A0A1V9YZY8_9STRA (Neuroguidin (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YZY8_9STRA) HSP 1 Score: 50.8 bits (120), Expect = 3.040e-5 Identity = 33/93 (35.48%), Postives = 53/93 (56.99%), Query Frame = 1
Query: 1 RAPKMSSVPYDEDGVAGGAAAAREEKRLARRRERLGRGEVMETVREEFGDQPEAVRAVGNAGRSGVSEAKMKRLLDEDKERLDFEEDHMVRLV 279
+AP+M+SVPY+E+ A R+E R R+RL + V+ VREE+ ++P+ + G + A K + E +E+ D+EE+ VRLV
Sbjct: 153 KAPRMASVPYEEEEREADKKAKRDE----RNRKRLAKSTVLSEVREEYSERPQEILTSGTS-------ALDKEIAKEAREKTDYEEERFVRLV 234
BLAST of mRNA_H-paniculata_contig36987.9760.1 vs. uniprot
Match: A0A7S1U8G9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8G9_9STRA) HSP 1 Score: 50.1 bits (118), Expect = 3.080e-5 Identity = 36/91 (39.56%), Postives = 54/91 (59.34%), Query Frame = 1
Query: 4 APKMSSVPYDEDGVAGGAAAAREEKRLARRRERLGRGEVMETVREEFGDQPEAVRAVGNAG-RSGVSEAKMKRLLDEDKERLDFEEDHMVR 273
APK+ S+P++E A AA K + + R RL + E+M ++REE G+ PE V A AG + GV+ +K + ED ER D+EE+ +R
Sbjct: 6 APKLRSMPFEEMDSAERKAA----KAMEKARRRLNQSEMMASLREELGEDPEMVDANLLAGSQGGVTSSKALAMRREDLERQDWEENRFIR 92
BLAST of mRNA_H-paniculata_contig36987.9760.1 vs. uniprot
Match: A0A485KMM8_9STRA (Aste57867_9210 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KMM8_9STRA) HSP 1 Score: 50.4 bits (119), Expect = 4.170e-5 Identity = 31/93 (33.33%), Postives = 55/93 (59.14%), Query Frame = 1
Query: 1 RAPKMSSVPYDEDGVAGGAAAAREEKRLARRRERLGRGEVMETVREEFGDQPEAVRAVGNAGRSGVSEAKMKRLLDEDKERLDFEEDHMVRLV 279
+AP+++SVPYDE+ + A ++ KR R R+R+ + ++ +REE+ ++PE V G A + K L E++++ D+EE VR+V
Sbjct: 151 KAPRLASVPYDEEEKS----AEKQAKRDERNRKRMAKSTILSEIREEYSERPEEVYTSGKA----ID----KELQREERDKTDYEESRFVRVV 231
BLAST of mRNA_H-paniculata_contig36987.9760.1 vs. uniprot
Match: A0A6G0X1C2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X1C2_9STRA) HSP 1 Score: 49.7 bits (117), Expect = 7.840e-5 Identity = 30/93 (32.26%), Postives = 58/93 (62.37%), Query Frame = 1
Query: 1 RAPKMSSVPYDEDGVAGGAAAAREEKRLARRRERLGRGEVMETVREEFGDQPEAVRAVGNAGRSGVSEAKMKRLLDEDKERLDFEEDHMVRLV 279
+AP+++SVPY+E+ A A ++ KR R R+R+ + ++ +R+E+ ++PE ++ +GR+ E L E++E++D+EE VR+V
Sbjct: 157 KAPRLASVPYEEEEKA----AEKQAKRDERNRKRMAKSTILSEIRDEYSERPEELQT---SGRTIDKET-----LREEREKVDYEESRFVRVV 237 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig36987.9760.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig36987.9760.1 >prot_H-paniculata_contig36987.9760.1 ID=prot_H-paniculata_contig36987.9760.1|Name=mRNA_H-paniculata_contig36987.9760.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=91bp MSSVPYDEDGVAGGAAAAREEKRLARRRERLGRGEVMETVREEFGDQPEAback to top mRNA from alignment at H-paniculata_contig36987:1295..1941+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig36987.9760.1 ID=mRNA_H-paniculata_contig36987.9760.1|Name=mRNA_H-paniculata_contig36987.9760.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=647bp|location=Sequence derived from alignment at H-paniculata_contig36987:1295..1941+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig36987:1295..1941+ >mRNA_H-paniculata_contig36987.9760.1 ID=mRNA_H-paniculata_contig36987.9760.1|Name=mRNA_H-paniculata_contig36987.9760.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=546bp|location=Sequence derived from alignment at H-paniculata_contig36987:1295..1941+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |