prot_H-paniculata_contig33146.8895.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig33146.8895.1
Unique Nameprot_H-paniculata_contig33146.8895.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length168
Homology
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BLAST of mRNA_H-paniculata_contig33146.8895.1 vs. uniprot
Match: A0A6H5L3T3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3T3_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 7.290e-14
Identity = 75/209 (35.89%), Postives = 90/209 (43.06%), Query Frame = 0 
Query:    4 RALLESLRRHVQRGQHSAPTFTAFQLIEQLFRCVESLETETRLLLIR-----PTSAPAAL-QRHEGRGGDGXXXXXXXARPSKKGGDGXXXXXXXXXXXXXXXXXXXXXXXXTESGR-------------------------RPTDSPSSSPQ-------------ITFPNESAYRLALTKLTAQLKAARERLRAEKVAVRSTGERAAQ 168
            RALLESLRRHVQRG HSAP+FTAFQLIEQ+F C+++LE++ +L   R     P++A + L      R G         A  +   G                            +GR                            D  S S +               F  E AYRLA+TKLTAQLKAARERL  EK A RS GER  Q
Sbjct:  176 RALLESLRRHVQRGHHSAPSFTAFQLIEQIFGCLKTLESDAQLSPARRRQRSPSAACSPLTDPSPPRRGGSPKRSPHAAVAAAAAGPRVTVKGLTPTPSSVSDRLDDEEDPDLRTGRGTNLPAAIGIGXXXXXXXXXXXXXXXXVDGSSGSQEEFQTQEGGGGRTTARFSTEWAYRLAVTKLTAQLKAARERLHGEKEAARSAGERVEQ 384
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BLAST of mRNA_H-paniculata_contig33146.8895.1 vs. uniprot
Match: D7FN22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN22_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 6.420e-11
Identity = 33/43 (76.74%), Postives = 40/43 (93.02%), Query Frame = 0 
Query:    4 RALLESLRRHVQRGQHSAPTFTAFQLIEQLFRCVESLETETRL 46
            RALLESLRRHVQRG HSAP+FTAFQLIEQ+F C+E+LE++ +L
Sbjct:  202 RALLESLRRHVQRGLHSAPSFTAFQLIEQIFGCLETLESDAQL 244
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig33146.8895.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L3T3_9PHAE7.290e-1435.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FN22_ECTSI6.420e-1176.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 138..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig33146contigH-paniculata_contig33146:104..2354 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig33146.8895.1mRNA_H-paniculata_contig33146.8895.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig33146 104..2354 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig33146.8895.1 ID=prot_H-paniculata_contig33146.8895.1|Name=mRNA_H-paniculata_contig33146.8895.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=168bp
KTLRALLESLRRHVQRGQHSAPTFTAFQLIEQLFRCVESLETETRLLLIR
PTSAPAALQRHEGRGGDGGGGGAGAARPSKKGGDGGGQGGGQGGGQGGGQ
GGNGIGNGFTESGRRPTDSPSSSPQITFPNESAYRLALTKLTAQLKAARE
RLRAEKVAVRSTGERAAQ
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