prot_H-paniculata_contig3305.8872.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3305.8872.1
Unique Nameprot_H-paniculata_contig3305.8872.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length565
Homology
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BLAST of mRNA_H-paniculata_contig3305.8872.1 vs. uniprot
Match: D8LQY7_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY7_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 3.700e-45
Identity = 86/130 (66.15%), Postives = 107/130 (82.31%), Query Frame = 0 
Query:  435 GLIMASSVERGRKEERARAWEEDVASRSALPARLERLAEASAVENVGDMPTDLRKAWMWDEFPEVAKMLNEVADSMAARGFHDQAADLFERSIEIYLCYTGPKGHGGKAEALNDLGYVLWEGCADTVFAG 564
            G+ +A ++ERGR+ E   AWE +V  RSALPARLE LA+ +++E +G+ P++LRKAWMW++ P VAKMLN+VADSMAA GFHDQAADLFER +EIYL YTGP+GHG  AEALNDLGYVLW+ CA+ VF G
Sbjct:  345 GMTVAEAMERGREREXXXAWEAEVEWRSALPARLEALAKLASMERIGEEPSELRKAWMWNDRPGVAKMLNDVADSMAAAGFHDQAADLFERCVEIYLVYTGPEGHGEIAEALNDLGYVLWDACANPVFIG 474
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BLAST of mRNA_H-paniculata_contig3305.8872.1 vs. uniprot
Match: A0A6H5LDX5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDX5_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 6.170e-39
Identity = 85/155 (54.84%), Postives = 104/155 (67.10%), Query Frame = 0 
Query:  435 GLIMASSVERGRKEERARAWEEDVASRSALPARLERLAEASAVENVGD-------------------------MPTDLRKAWMWDEFPEVAKMLNEVADSMAARGFHDQAADLFERSIEIYLCYTGPKGHGGKAEALNDLGYVLWEGCADTVFAG 564
            G+ +A +V RGR      AWE +V  RSALPARLE LA+ +++E +G+                          P++LRKAWMW++ P VAKMLN+VADSMAA GFHDQAADLFER +EIYL YTGP+GHG  AEALNDLGYVLW+ CA+ VF G
Sbjct:  595 GMTVAEAVGRGRXXXXXXAWEAEVEWRSALPARLEALAKLASMERIGEGAFGQVGLTSCLRCLMLAVLPVVAAEPSELRKAWMWNDRPGVAKMLNDVADSMAAAGFHDQAADLFERCVEIYLAYTGPEGHGEIAEALNDLGYVLWDACANPVFIG 749
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3305.8872.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQY7_ECTSI3.700e-4566.15TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5LDX5_9PHAE6.170e-3954.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3305contigH-paniculata_contig3305:11050..16679 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3305.8872.1mRNA_H-paniculata_contig3305.8872.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3305 2609..16679 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3305.8872.1 ID=prot_H-paniculata_contig3305.8872.1|Name=mRNA_H-paniculata_contig3305.8872.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=565bp
MDVSRSVFVGAEYAGVWEAESPVQVVQVRRRPLNTVGSSSASSTSFTATS
AVLPRLGGESRSSAMPALPRVGWVDTSSSSTSRVPPSAVSTAGVAEAWVS
REEAPFAALRKIEGSGSACRAARRKSGRTSHQKPRRDNSGNSCNKGPECG
VHCDSRQQNHSGTIDSTVLSSSHWAAGGGAASVESTLPEGIARGYHAVTP
STAGCGSGGFEFAGSAVDVDGNGMLALDKKERYRRPSGEVVAGKETDTWP
GRGVTEAAISYTAVSSASGSSANMLQARAHDASILFMPMPAPMLPNASAT
GQLPQRRQSRREGSGKVRTGSGKVRSSATTNTSSRKGSGKIRNEGSFDAG
KKLRNGSARNLSAKKSSTSGGSGALSRAGSRSTARGVSGASGAAAPDVAF
SGSHKSTQKARKSGRRSSGRSRVARERKAAARESGLIMASSVERGRKEER
ARAWEEDVASRSALPARLERLAEASAVENVGDMPTDLRKAWMWDEFPEVA
KMLNEVADSMAARGFHDQAADLFERSIEIYLCYTGPKGHGGKAEALNDLG
YVLWEGCADTVFAG*
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