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Homology
BLAST of mRNA_H-paniculata_contig3305.8872.1 vs. uniprot
Match: D8LQY7_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY7_ECTSI) HSP 1 Score: 182 bits (462), Expect = 4.680e-43 Identity = 86/130 (66.15%), Postives = 107/130 (82.31%), Query Frame = 3
Query: 2586 GLIMASSVERGRKEERARAWEEDVASRSALPARLERLAEASAVENVGDMPTDLRKAWMWDEFPEVAKMLNEVADSMAARGFHDQAADLFERSIEIYLCYTGPKGHGGKAEALNDLGYVLWEGCADTVFAG 2975
G+ +A ++ERGR+ E AWE +V RSALPARLE LA+ +++E +G+ P++LRKAWMW++ P VAKMLN+VADSMAA GFHDQAADLFER +EIYL YTGP+GHG AEALNDLGYVLW+ CA+ VF G
Sbjct: 345 GMTVAEAMERGREREXXXAWEAEVEWRSALPARLEALAKLASMERIGEEPSELRKAWMWNDRPGVAKMLNDVADSMAAAGFHDQAADLFERCVEIYLVYTGPEGHGEIAEALNDLGYVLWDACANPVFIG 474
BLAST of mRNA_H-paniculata_contig3305.8872.1 vs. uniprot
Match: A0A6H5LDX5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDX5_9PHAE) HSP 1 Score: 164 bits (414), Expect = 3.370e-37 Identity = 85/155 (54.84%), Postives = 104/155 (67.10%), Query Frame = 3
Query: 2586 GLIMASSVERGRKEERARAWEEDVASRSALPARLERLAEASAVENVGD-------------------------MPTDLRKAWMWDEFPEVAKMLNEVADSMAARGFHDQAADLFERSIEIYLCYTGPKGHGGKAEALNDLGYVLWEGCADTVFAG 2975
G+ +A +V RGR AWE +V RSALPARLE LA+ +++E +G+ P++LRKAWMW++ P VAKMLN+VADSMAA GFHDQAADLFER +EIYL YTGP+GHG AEALNDLGYVLW+ CA+ VF G
Sbjct: 595 GMTVAEAVGRGRXXXXXXAWEAEVEWRSALPARLEALAKLASMERIGEGAFGQVGLTSCLRCLMLAVLPVVAAEPSELRKAWMWNDRPGVAKMLNDVADSMAAAGFHDQAADLFERCVEIYLAYTGPEGHGEIAEALNDLGYVLWDACANPVFIG 749
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 183.7 |
| Seed ortholog evalue | 2.3e-43 |
| Seed eggNOG ortholog | 2880.D8LQY7 |
| Hectar predicted targeting category | other localisation |
| EggNOG free text desc. | determination of stomach left/right asymmetry |
| EggNOG OGs | COG0457@1,KOG1840@2759 |
| COG Functional cat. | C |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Exons | 7 |
| Model size | 2978 |
| Cds size | 1695 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3305.8872.1 >prot_H-paniculata_contig3305.8872.1 ID=prot_H-paniculata_contig3305.8872.1|Name=mRNA_H-paniculata_contig3305.8872.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=565bp
MDVSRSVFVGAEYAGVWEAESPVQVVQVRRRPLNTVGSSSASSTSFTATS
AVLPRLGGESRSSAMPALPRVGWVDTSSSSTSRVPPSAVSTAGVAEAWVS
REEAPFAALRKIEGSGSACRAARRKSGRTSHQKPRRDNSGNSCNKGPECG
VHCDSRQQNHSGTIDSTVLSSSHWAAGGGAASVESTLPEGIARGYHAVTP
STAGCGSGGFEFAGSAVDVDGNGMLALDKKERYRRPSGEVVAGKETDTWP
GRGVTEAAISYTAVSSASGSSANMLQARAHDASILFMPMPAPMLPNASAT
GQLPQRRQSRREGSGKVRTGSGKVRSSATTNTSSRKGSGKIRNEGSFDAG
KKLRNGSARNLSAKKSSTSGGSGALSRAGSRSTARGVSGASGAAAPDVAF
SGSHKSTQKARKSGRRSSGRSRVARERKAAARESGLIMASSVERGRKEER
ARAWEEDVASRSALPARLERLAEASAVENVGDMPTDLRKAWMWDEFPEVA
KMLNEVADSMAARGFHDQAADLFERSIEIYLCYTGPKGHGGKAEALNDLG
YVLWEGCADTVFAG* back to topmRNA from alignment at H-paniculata_contig3305:2609..16679+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig3305.8872.1 ID=mRNA_H-paniculata_contig3305.8872.1|Name=mRNA_H-paniculata_contig3305.8872.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14071bp|location=Sequence derived from alignment at H-paniculata_contig3305:2609..16679+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGACGGTCTCCATCTCCACCCCAACTGCAACGGACATCCTGTATAGTTGT
GAGCCCACGATCCCATATAGACAACAACAACCCCGCAACCCGCCCAAACT
TGGCGCATTGACATCGCAACGGTTGGGCAAACGCAGGTCGCACAGGTTGG
CAATCAGCAGGCAGCAAGAACAATGTCCAGCAGGAATACAGCAGCTGCAG
ACGCCAACACTCCTTATGCCGAAAGCTTCGCAGTGCCGTCCAAGCTCGAG
ACCGTTGCTCCAGTTCAGACCGTGGGTGGGCACTCGGTGACCGGCTGTGC
CTACAGCGTCATGGGTAGAGACGGTAATGTGGTCCCGGCAGCCTCTGATA
TTGTGGTGGGTACGAGAGCGGGTGGGCTAGTAGCAGCTGGTGTTCGAGGC
GTCGTGAGGGGGGGTTTCGCGGGGGCTGGCTTTGTCGGAGTCTCAGCGCG
GAATGATTGGGACCGTTCGCCTGAGAGGACGGTGGTGCCGCCTCTGCCCC
TTGCGCGTGCCGGCTCTCCAGTCCTTAGGACTGATGAGGTATGTATATGG
GTTTTTTTGCTACTGCTGGTTTGTTTATCAGATTGATAATTATTGTGTCT
TGTCTCCTGTGTACAGACAGAAATGATTACGGTAGTAACTTGCGTGCGGT
GTGTTGACAGCCCGACCTTAGTGTTTCGCGGGTAATTTTTTCGAACGAGC
TCATGTGTGTTGCCTTGCCAGGGTGAGATGTCGTCTAGAGGCCTTTTATT
GTTGTTGGGCTTTGCTGTAGGGATAGAATTGTTCGAAGTGTGATTTACTC
CACGTGAGTGCGTTCAATTATTGAAAATCCAACCGATGTTGTGTCATATT
ATCCTTGAGGGTGACCGGGTTCATGTCCTATCACATCACTCTGGAGAAAA
AATACTTTCAATCGACTGTCTTGTCTTGAAAAAAAGTTATGCAAAGGTGT
CCCCAATGGTTTGCTTACTGAAATGTTGTAGTGTTCGAAATCGGGGAACC
ACATCGATACCACCGTACCACATTTGTATCATTTCGAATGACACGCTCGC
TAGTAGAGGAGAGAGACACCGGGTTGCTAGGTGGATCTCGTCTAGCATAT
TCATGTTCACTAGGTGGGATCGCCTTCTTTGTGCACATCAATTGAACGAG
AACCGTTTTCGCAAATCCTGCAAAGCAGATAAGGCACTCACGACCTCCTA
CCACCCATCTGAGTTTGTGCATAGCCCAAAGAGCCCGATTGACTGACTGA
ATCGACAGTAATTTGCCCAGGGACCCAAGAAAAAAGCCACGTCAACGTGT
GCCGTGCATCTGGGGAATTCACGTACACTGAGGTGCCCGTTGCAGCAGAC
AGTTGGTCGCGGAGGTACAATCGAGGCATGCTCTCTGAAGTCATCAAATG
TTAGGACGCAGATCTTGTTTGTTTTAGCGCCAAGTCGGTCCGCCATCAAT
GTCCTAGGAGCTGTGGTGCAAAACAATAACATGGTAAATGGAGTTTGAAT
AGTCTACGCCGACCGAGGGGTGGGTGCATGGATCAATCCTCGATGAAATG
TATCAGACAGGTAGCGGTTAGTTCCATATGATCATGATAAATTGTGTTGG
AATGCACAGCTGTTTTCACGTGGCACATGTATAGGCGGACAATCAAACCG
ATAATTCATGAAGAGTTCAGTAAATAGCAGTAGAGAGCGATGGACTCTTT
CTAAATCAATGCTGTCCTACTACATGTACCCCTGGGAGTACTTGCTATCC
TGACAGGACCTGACGATAGACTGTTTTCGCCGCATCGTACACCGCAATTA
GAAAATACTTGGCTTCCAAAAGCCCAGCAGCTAAATTTCATAAGCCCTGA
GAAGATATCATCGTTTTCTCCAGAGCTCAGCTTGTAGGCTTTTGGGGGAT
GCTCGCGTATCGAAGGCCGTTGCATCTATCGTAGACAGAATAAGAATAAA
TGACGTGTTTCTACTTTTGCACAAAGAGGTAATGGAAGAACGGGCACATA
TACTTTTTCAAAAGTATATCATCGAAGATAGGAAAATAATACAAGCTACA
GTTGAGTAGAAAATATGGGCTTTTATCTAGGTACAGCAGATTTAGTTGAA
AAGAGACAACTCGAGGTTCATATATAAGCTAGGCCCTGTTTGGGAACAGC
GCAGTACAGTACTTGCTTCTGACAGACAGTCCCCCTGGAAAAAGGAAGGG
CTGAGATTTGTTTTTCACAAAGATGGAGCCTAAGTTTCTGGCATAACCGT
GCCCAGCGCAGCCGCCTGAAAACGACGAAATGGCAGCACCAGATAGCAAA
CACAGAATAACTACAACGTGGCAGAGCAGCCTTTAAGCCCACCCTTCGTG
GTCTATCAAAACCCAAGATGTGCGGTGAGGTGGGAGAAATTGATCATATT
TTCAGATTCGTGTCGAATCAGCTCCGTGACATGGAGATGTTCATCGAATT
CTGAGCTTGTTTTAGGGGGGTGTTCACGGTGACATTGGGGATCGCGGGTC
CTTACTCATAAGTGTCATCTCTGTTGAAGGGAGAATTGGAAAAAATAGAA
CCAATCTTGAGTTCCAAGTGGCAACCTAACATCCTCTTTTTTTCGAAAAT
AATTCCGTGAAATTATGTTCCAATTTCTATATGATTTCGCTGTCCTTACT
TACCTTGACACAAAAATTGCAACTCGATCTCAGCACAGCCATAGCCATTA
GGAGTGATATCCCGGTTGGTCGGGTGATTATCGAGACGTACGTGATTTCG
GACGGAAGGTGGTATTAGCTGCCTTGCAGGTATATCTTCCGAACGCCTTA
ACGCCCAGTATTACGTCCGTTATCGGGAAAATGTTTACTTTTTTTGTTTT
GCTACTTCTCGATCGTAAACTATTTCTTTTTTGGAATATTGGAAGAGATT
TCATTCATATTTTGGCGTTTTATGTATCGATTAATGTTGAATTTTCCAGG
TATTCAACATGTTTGGCACGTCTTTCTCTGCGCTTTGCTATCCCCGTACA
GTTTTGACGTCAGTATTCGACAAGCCGTCATGATCTTTTTAAGTTCCGCC
GCATCTTTGAAGCGTCATCTGAGAACCCTAGAGTGGCGGTGAAACCACTG
AATAGACTTGATATGATAGCTGTTGTGCATACGAACGAACCCGACCACAT
TGGTTTAACGTCTACAAATTAGAGGTAAAAAAACAAGACGTGATCAAACT
GTGACTAAAATAGCCTTCTGATTCCCGCTACTTCACCTGTAGGTAAAAAC
AAGGTGCTATTTTTGGCAAAATGAATAATCTCATATGGTAAATCTGTCAA
CCGGTTCTCAATATGGTGATGGAAAAAAAAGAAAGTGTAGTGCCTGTCAT
GTGAGAAAGTCTTGATGGTCCCGATGCTCCTTCGTTTTGAAATATTTTCA
CCGCAGCCAAGTAAAGGAGGTTAAGTTTATCAAGAGCAACAGCCAGGGCT
ACCCCCTTTATCGTACCTGAGTTAACGGGTAGTGGTCACAATCACTACCT
GTGCGGAGCTCCTTTGGTAGGTTCACAACTAACTTCATTTGGCCGATTGG
TCAACACAAAAGCCCTTGGTCTCGCCTTCGTCCCGATGTATTCATATCCT
CCGATCAACGGCCTGATCGTTTCCATTTTTGTGCCGACAACGGCCAACGT
CTTTTACGGAAAGTCTTTCTGACTGTCTAGAATCGATCAAGTAGGTCATT
GTGTGCATGGTCGAAAATGAACAGCAGCAACCAGCGTGCCGAGAATGTTC
CTCACCAATCACAGACTCCCCAACCTAAATCGGATTCCGCAATCGGCCGG
AACAAATAATATATGACCCTCGATAAGACTCAGCTCGGGGGGGGATAACT
GGACCTCTGTCACGTCGTATCTTTCCTTTGCTTTTCACGCGACGCCCGCT
TTTCAATCGGGCTACAGACCCACAGCTTGCTTATACTTCGCATCACTTGG
CGGTTATTTTGTGTCCCGCCTAAGCAGAGCAGGGTTCTGTGCTCCACAGG
TTGCCAGCTGTTGCAGTCATGTTATCCTTGATCCACGATTTCATCCGCAA
ATCTACTTTATTTCTCGGCCCAGTGATTTGTTGGAATGTTTTTTTTTCAT
TGCGCTTTGAACCCCGCGAGGAAAATCGATGGCACGAAATGGATTTCGTA
AAGTCAGGAATATATATTTTTGAGAACAATCAGTCCTGGAGGGGAATGAA
ACAGACCAAGACGGTGAATGGGAAAGTGTTCAAGAAACGAAGCACTGCGG
TCATGACCTTGAAAAAGCTTCCCCAGGTGTAGCCGTACATAGCTTGAGTC
ATGGCTCTTGTTCCAATGAGCACCTTTTACCGTAAAATCCCGAGGTGAAG
TACGGACCTACGCCCGAACGGGTAGGGTAACTAGTGAACTGAGCATGACT
GGAAGTCTTTTAGTGGATGCAACCCCCACACTGCGGGATGGCGCCTACCC
CGCAGAGGAACAAAAAACTCTGTTCTGTTACAGGAAATGTAGAAATACTT
CGGTATGGAAGCATCGGATAAAGGTCTTTGCCTTAGCCTTCCGGGGGTTA
AAAAAAAAATCAGGAGGTGTAGATATTATCTGAGTGCCAATATTTCTCAA
ACGCGACTATCTCGGGAACGGAGACTTGACCCGTTCGAAAGAACCCGTCA
ATCGAGATATCTCCGCAACATCCTTCCGATGGCACACTATTCCCTTTCAG
CGACTAGCTAGAGCTGTAGTTCTTGAGATAATTAATCGCGTTTTGAAAAA
CGTTTGCACCTCAGCGCGATAGCTCCGGGTCTGTTTTATGGTTGGTTGGC
TTGTTTAGTAGGAGTTTCTGAAATGAAGGACCGTATCTTCACGTTTTTCG
TTGCTGCCCTCCCAAGCCAGACATGGACAAACGACGAGTTTTTTGTGTTT
TCGCAACTCCAGATGAGGTTGCTGTAGCTCCTCCACTACCGTAGGGATTC
CGTCAAGGGAAGCCTTGCAGGTGCATTTTAGTTTTATTGTAGCAAGGACT
CATGACTATCGTCGTTTCCAGGGTCTTCAATTTAACCTTCTGTCTCTCTT
TTGGCCCATTTTTTTGTGTTCCATACTAACGTGGTTCCTCTCGGACTTTT
TTTCTATGCAGCCCGCTGGATCCAACCATTTTTGTAACGGGCAGTACGAC
CGTCGTCATCTCCGGCAAGATTTCCTAGCAGCTCGTCTTGGCTCCTCAAC
TCTTTTCCGAAGTTGCTTAACAATAACCCGGTCATCCATCGAAACTCTGG
CTTTCAAACCGGTGTCGAATAGGAATACAATATGCATATGTATGTTATTT
TCTGTACGGTTCAGTTCCGATCCGCAAATCGCAGACCTCGCTTCCTTTCT
ATCCTACACTTGGCTCAATAAGACACCAAATCAGTTCGTCGTCGAGCATC
CCTTCAATACCCTTAACGACCTGCTCTCGCCCTCAGCTGAGGCCTAGTGA
CCTGATTCGTCCTCCGTGTGGTATATGACGTGCGTTGGCAAGAGAGCTCA
AATCGGTGTCGCTGGTGCTGCCCGTGCCCGAGTCTGGCTCTGTTTTTGAG
CACACGCCTTATAATCGTTTCAGGTCAGAACGTTGCGCACATCCAACAAG
TTATGACTCGTACACTCCGCATCACTAATAACTAACTGTATGGATTTCGC
GATGCACTGCTCCCCCGTGCCCCCTACCCCATTCTTTCATGAACCACTCG
ACCTATCTGTGAACATGAATCCTCTTACTGTGCTGCTGTAGGCATGGGGA
CCGGTGCCCAGCGCGATAGTCTTGCTTGCAGATTTTGACATGATAATAAG
GCCGCCGCCAGCTCCAGGGAGTTATCTATTCGAGTCGAGTCTCGGGGTCT
CCTTCGTTAACCTGTTCGGATTCGGTCTGCATAGAGTCCCCACCCTGAAA
CACGGAGATAAGCTAGCCACCGCTGTCCAGACGAGCAGTTTGGTACACGC
GTTGAAAACAGAACAAATCGGGTACTGGCATGGTTCGCCTATAGAGCTAG
GTATTTAACTTGAAGAAATATTTTTGGTCTGAAAAAAGCCTCCAGCGCTC
CACGTATTCTGCGAGTAAAAGGCTGAACAACGTGCGTGTTGCCTAGTCCT
AAGGAGCCTTTGATCCAGAAGTCTTACCCATGAATAGCTTATCTATTGGT
AACCAAACAAGTACAACACAATCTTTGGCCCTCCTCGCTCTGTACCGAAT
CCAAGAGAGTAAGGCCCTAAACTATATAATTTTAAAACATGGCCGCCTTT
CGGACGGAGTTAGAGATAGCCTATTATAGCCAGCTTTCTAGAGCTGCTTA
CCTTTTTGTGGTATGTTTATCGCCGTCAGTCACGAGTGGTCGTTAGCACA
TCCATGTTTTTGCCGATACGAGATCCGGCTTTCAAATGTAGAAATGCCGA
AAGCTTTGAAAGCTGAACAAGGAGAGTCCCCGACGAGTCTGGTGCGTGCT
TCGTGTGTTTTTTCAAGTTACGGCCAAACGCAACACCCACATGGATCGAA
AGTCGGTCATAACTTGACAAAAAAAATAGTAATAGTAATAATATTAATAA
TCACCTTATTCGAATATCTTGGCGATTGTATTACAAATCACGTGTCAAAA
TTTCAGAACAAAATTCGATAAGTTGGGCGATTTTTCTACAGAGCCTTTTG
CGATATACACAGTTGTATGTATATTGTACAACATTGCAATGAGCAAAAAT
GCACAGACGCATCGAGATTCTAGCCGGCGGATAAGATATGTTCGGCGGAG
GTTTATCCTTTGGCAGCATGCAGTGTACAACAGCACCTTCGAACTGAAAT
CAATGTCGTTGTTGTATCATATGAAGGAAACTTTGAATCTTTCGATCATT
ATCTATTGCGTTATCCTTACAGGTACCAACTTGTACAATACTAGGACAAC
CAATGTACAAATTATCACAGCGTCCGATCTTCTGCCAATGCACCACACAT
TCAATCATACCAGCATCACTAACCAGAAGGCCCCCCAAGGCAGAACAGCA
CGATACTCCACGCCAACACACAAGTACAACTGGACAAAGCTGCTGGTGCT
AGGTACATATCAACGCCCCCCCCCCCCCCGATCCATGCGATTGTACAAGT
TTTACTGCGTTTACGGAGATTGCACGATTTTGATTTTTGACTCGGACGTG
TGTATCTCAGCTCCAACCGTTACGTCCCCGTGGCCTTGTCGTGCACAATC
GAAGGGACTGAGGCCATCTGCCACTGCTGATCCCCTGGCACTCTCGTAGT
CATGTCGCAGCGCGTGGGCTTGGGGTGTCTCTCATCCGGGCACTTTGTGC
CACATAATTCTCATTACCCCGCAGAAAAAAACGACTTCAGTACCAACTTC
TGTACACACGGTGATTGGAAAAAAACAAATTTGAATGGGCTAGCCACGTG
GCTATGCAATGCGGGTAGATTTGCAGATTGCAACAATACTTTCTTTTGAT
ATTAATTGCAGTAGTTGAGAATATATGATTGTCCTAAACAATATGGATGT
TTTGGTCGGTCCAGCCTGTATCGATCATGCATATCCTGAATTAGGGTGGG
CTTCTGTTCTCTGGCCAATCATAGAGGCCACAGAGGCTGAAGTTATCTTG
GTTCATAAATACCTGGCCTGAGGGAGCCTAACCTGAATTCTAACTCTATT
CGTCATGAACTCCTCGTGGAATTGGCCCGCAGGCGCCGATGTCGGATGAA
GAATCAATGCAGAGTCCACCAGCGGTGATCCTCCCGCTACACCAAAGCAA
TCCCGCACGGCCCCAAAACGCCGCCAGCACGAACGACAACCGTGGCCTAA
CCTGCGACTCTCCCCCTCCGCTAACGCGGGTGGCAAGAAGAGAACCCACT
AACGGCGGCGGCAACATCTGGATGACAGACGCCGCGGAGGAAGCATCACC
CCTAGAAGCCCACTCGCGTTGTTCGTTGTCGCGATTAAGACCGACAATCA
TCATGAGCTGTAGCAGCGTAAGCTCGGCAACTACGGGGACTTCATCAATG
GCGGCCTGCGCCGATGGCAACGGCGGTGGTAACGCCGGCGGCGGTCTTCA
TACGAGTTGGCGAAGCGGAGTCGTTGGGGGGATAGAGAAAGGAGACGTCG
CCAAGCCTGGTACCACACCCGGTCCCCGCTCCGCGACAACGCTCCCGCCT
TCTGGAACGCCTTCGGAAGCGCCACCACCGCCGGCACCTCTACCGGAGAA
TCAATTTCGGGAACATTCTCAGAATCGGTTCTCGTCATCATCCCGCGGAC
AACATGCAACCAGGGCAGCAACCACCTCCTCCGGTGTTGTTCCGGCGGTG
ACGGATTCCGGCGATGCGAGAAACGGAAAGGTGGGCAAGCCCACTCTAAC
CCATAATTTTGGAGTGTTCGACAGCGGTGGCGGCGGCGGCGGCGATTACA
AGAGATCGGTGGGCGGGCGTGTTCGCATTCGAGGCGGGGAGATGGACGTG
TCTCGCTCCGTTTTTGTTGGCGCCGAATATGCGGGGGTATGGGAAGCAGA
GTCACCCGTCCAGGTTGGTTCTCTTCTCGTTAGTTGATCTTTTCCAAGAT
ATACAGAAAAACACAATAGCTGTACCTCACACACACACGCTAGAAGGAAA
ACTCTTGAAGCATGCGCCATTTACTCGAGCAAGGACGGGTTATGTGCAAT
GTTTTTTGAAACGTATGAATTATATCCACTTCTCCTCTTTTGTTGGTGCG
AAAATTGTTGCAGAAATAAATTATGCTGAATGTGTAACGCACATTTCGGG
TGAGTTTCCTATATATCCATGTCCCCCCTCTACCCAACACGACGACTTTC
GAGCTTTTCCGACCGTTTGGGTTCACTTCTTACATGGAACTCACGTGTAG
AGTAAGCTTTGTGTAGTTCATTCAACCCTGAGTATACTATTGGTTGGAGG
TACGAATCCGTACCAAAGTTGTACGTAATCGTAAATGCCGCCTATTTCTT
TCCGGTAAAAACCGAGTCCTGAAAAAAAAAAAAAAGAGGACTTGCCTAGT
GACCATGGCGCAGTAAGCCCTGGTAATTATGTCGTAACCGTCTAAATCAT
CGTGTGTACACAGTTCCCAAATGTTATCTCACTTGAAGTAAATGCGCCAT
TCAAATTCAACACGGGGGAAAATTCCCCATACACTCATTACTTTATTTGC
AAACATGCCGGCCGAAGTCAAAATCATCCAGTAGAAATTGAGTAAAACCA
AGGTTCTTCACCTATGTAACGTATCCTTGAAACTTTGTCGTTATTCCCTG
TTGACCGTTTTCCTCATGTACCCTATCTACTGCTCGTTATAACTAGAATT
AATAAGAAAAAGTTTTTTAGTAATTTTTCCCTATATCTTCAATTACTATT
GACAAGGTACTATCTTGTCTTCTATAATAAATATATAGATAATGTTTACT
TTTGTAATACTTTAATTCAGGAGTGAAAATATGAACACGCCTAAAAAGAA
AACAAGTCATTGAAAGTCAAAATCTCGATCAGCTAATTGGTCAGCTAAAG
CCAAAGCTATCCCCCGCCCGTCCGCCCGTCCGCCCGCTCGCTGCACAGGT
GGTGCAAGTCAGACGACGGCCGCTCAACACAGTCGGCAGCAGTTCCGCTT
CCAGCACCTCCTTCACGGCGACCTCGGCCGTCTTGCCGCGCCTCGGCGGC
GAGAGTCGCTCTTCTGCCATGCCCGCGCTGCCGAGGGTAGGGTGGGTGGA
TACCTCGTCGTCGTCGACATCAAGAGTTCCTCCTTCGGCAGTCAGCACGG
CTGGCGTGGCGGAGGCTTGGGTGTCGCGGGAAGAAGCGCCGTTCGCCGCG
CTGCGGAAGATAGAGGGATCTGGGTCTGCGTGTCGTGCGGCGCGGAGAAA
GAGCGGGAGGACGTCTGTAAGTGTGTGAAAAATGGGAGTGGGTGCTAAGG
AGGATGGAGGGGTACACTGGGGGCCAGTTAAAGTAAAACTCTTAACCTTG
TATCATATCTTTTTAATAACCATATTGAGGTTATTAGGTTACGCAGCTGA
CTTCATTTTACGGTAGTAGGTCTTGAGACTTATCAGCAAAATTTAATCGA
TCAGAGGGGGGCGAGTGTACACAATGAGAATGCGATTTGAAATAGTATCA
TTGAGTAAAGAGCAAGTTAAATGTACGAGCAGGTACGCACGACGACTGAC
TTTTGACTGTGAGAAATATGACCAAATCGGTAAAAAAAAGAGAGAGGTAT
GCTCAGCGTCTTCAAGCTGCCGAATTTATTTTCGACAAACTTGACAAACT
TCGGGGAAGGGTATTCAGGTTTTGCATGCCGTGTTTGTTTGACATTTGAC
CGCACTTCCTCTAGAGAACGGGGCGTTGATTCGCGTTTTTGTTGAGCGGG
AAGAGGTTTTTAAGTGAATGTTGACGATGCCGAGAGGGGCAGTGTGGCGT
CGCGTGATCGAAGAAGCTTGTGTTACAAGTTTTTGTTTGTTAAGCCCCGC
TCGAATTAAGCCTCGTCATGTTGTTTTCATCTTGTCCCAAGCTTTCGAGG
TTCGCATTTGAAGGCCTGTGTGCAGCTTGTCGGGAGTATCCAAAAGGTTC
TCGACTTCATTTCGTTCGTGAGACTTCGAGCTTTTTAAGACTCTCTGGTG
ACTACCTCTCCCTTGTATGGTTTTTCCCGTGAAGGCCAGATACCGTAACC
CAAGAAAAGTATCACGCCTCGGATAAAGGTCGAATAAGGTTGTCGCGAAT
TTCGGAACTACGGTAGCTACTGAACAGTACTAGGCGCTTTTGCAAATATG
CTCTAATCGATAGCTGAAAACCCTTCACGTCTTCGCGAAGTGTTCGATTC
TAGAGCATGAAGATTGGCTGAGGGTTGAAGGTTTTATTAAGGTATTGTTT
ACTTGAAAATAAAGGGCTTCATCCGAGCTCTGAAAAACATAGTACTTGGT
AAAATGTCTTCACAAAGAGCAGCAGTGAGGCTCTATTACGACTGCATCCC
CATCATACAACCCGCTGAAATTGTGGTGGCGTTTGTTTGGGTTTTTCTTC
AACTCCGTACTTTCTCCAGTAAATTTTAAAAGTGGACCTTCGTAGAGGAC
GTCGTTTTGTGTGTACATGCTAAATAAAACACCAAAAGCTGCTCCAAGTG
CGAGCGATTGTGCGTACGGAAATTGAGGACTAAGTAAGGAGAAATAGCAG
TGTGGCTTCACTAAAGCGTCTTGCGGTCATGTCCATGCTCCAGTCGAGTA
ACTCTAGAGTACCCCAACTCTCCTCTCATGAATTTCTTTCCCAAGGCTCC
TCCTTCCTGCGTCAGTGACGTGCTTATGCCAACGCACCAGCCCTCGCTTC
GCTTCTCTCCACCTGTCTCTTTGCGCGCTTTCTCACGCTTGTTTTGAACC
CATCGAATTCTAGCATCAGAAACCTCGCCGGGACAACAGCGGCAACAGTT
GTAATAAGGGTCCTGAATGCGGCGTACACTGTGACTCCAGACAGCAAAAC
CACTCCGGCACCATTGACTCCACTGTCCTATCCAGTAGCCATTGGGCAGC
CGGTGGGGGCGCCGCGAGCGTTGAGTCTACGCTACCGGAGGGAATCGCGC
GAGGTTACCATGCTGTTACACCAAGCACCGCGGGTTGTGGCAGCGGTGGT
TTCGAGTTTGCCGGCAGTGCGGTCGACGTGGACGGCAACGGTATGTTGGC
GTTGGATAAGAAAGAGCGCTACCGCAGGCCTTCAGGAGAGGTGGTGGCGG
GGAAGGAAACTGATACATGGCCAGGCCGCGGGGTAACCGAGGCCGCCATC
AGCTACACCGCTGTCTCCTCGGCTAGCGGGTCGTCGGCAAACATGCTGCA
GGCGCGAGCTCACGACGCCAGCATTCTTTTCATGCCCATGCCGGCGCCCA
TGCTGCCGAACGCCTCGGCGACTGGACAGCTGCCGCAAAGGAGACAATCG
CGACGGGAGGGTTCGGGGAAAGTCCGAACCGGTTCTGGGAAAGTCCGCAG
CAGTGCCACGACCAATACCAGCAGCAGGAAAGGTTCCGGGAAAATACGAA
ACGAAGGTTCCTTTGATGCCGGGAAAAAGCTGAGAAATGGCTCTGCGAGG
AACTTGTCGGCGAAGAAAAGCAGCACTAGTGGTGGTAGCGGCGCTTTAAG
TCGCGCGGGGTCGCGATCAACAGCCCGTGGGGTGAGTGGCGCGAGCGGTG
CGGCAGCCCCCGACGTAGCGTTCAGCGGAAGCCACAAGAGCACTCAGAAA
GCGAGGAAGAGCGGTCGGAGGTCGTCCGGGAGAAGCAGGGTAGCGCGGGA
GCGTAAGGCGGCGGCGCGAGAGTCTGGGCTAATAATGGCTTCGTCGGTGG
AGAGGGGGAGGAAGGAGGAGCGGGCCAGGGCGTGGGAGGAGGATGTGGCT
TCTCGGTCGGCGCTGCCCGCGAGGTTGGAACGGCTCGCGGAGGCTTCTGC
TGTTGAGAACGTCGGTGACAGTGAGTTCGTTTGCTGTGTTTTACCATGAG
TGTGTTCCAGCTGACCCATGTAAAGGAAGTGCCTTCAGATAAGACGCCTC
GAATTTTGCTTTCACGGCTTTTTAAGAGGTGGACTGCAGCCGGTGCTAGA
GTTGTATATATAGCTCGGACTCATGGGCATTAACGCAGCAGCACCGCCAC
GTTGAACTTGCAAGCACTTCCGAGTCAGACGTTAGGTCTGGCGATGTTAA
TCTGACAGAGCCCTGATCAACTGTGCAGAGCTTGTTCATCATGTGATCGT
GAAACTAGCCCAATGTTTGTCCCGTCTCGCTCTCAATTCCAGTGTACCTC
TCGAGCGAATTAAGGGGGCTGTATTGACTTCAGGTCATCGAATTTTCATA
TTAATTTCGAATACTTGAATCGTTGTCTCATTACATGCGATGTAACTATT
GGTAGTGGCAGTAATATCATCATCCTTTCTCTTTTATTGAATCCTTATTG
TCTACTTTCTTCTCTCGGGAAACTAACACCCTCGCAGTGCCTACGGACCT
CCGGAAGGCGTGGATGTGGGACGAATTTCCAGAAGTAGCCAAGATGCTCA
ACGAAGTCGCGGATTCTATGGCCGCAAGAGGCTTTCACGACCAAGCAGCA
GATTTGTTTGAGAGGTACTTTTGCAGAATTTGCGGCAATCAAACGTACCT
TGGGGATTCCCGTAGCTAGCTGTATGTTGATTTCGGGGGAACCTCTGGTA
ACTAGATGCGGAGAGATGAGTGTATGATGTATGTACCCTCGAGCGTGAGC
TTTTAACTGGCTTTGACCTCTTGCGTCATGGAGTTTTGGGTTTGAGTGCT
TGGAAACTTAAGATGTGCAGTTCTACCAGTGGTGACGCCGTTGAGAACGG
GACGCGCTCACGAGAGACTGGCTTTTGAGAGTAGAAGAGGGGGAGAGAGC
AACTCCTACTTCGTTGATTGGTTTCATGGTTTGGGGTGTGGTGAGTAGGG
GAGCACACACTCGGTCACTCTGGTAATTGAACTGGTGTAAGCGCTGAAAG
CCGCTACACAACTGTCCGATAATGGGGTGGCATTTTCATGGATGTTGTCT
ACAGGGGCAGGGATCAAGAGCCCTAGGAACGTCGGGAACGTCGGGAACGT
GAGAAACGTGCTCTCCACATGTTCCATTCTCAAGAGAGAGGTGCAATTTC
CTGTTGGTGTACTTGAAGGCTCTACGACTGTAGTCGCTCCCCGGTGGGCA
CGACCGTACCTTGAGGTGCATCATGTTTCGTAGACCTAGCACGGCCACTT
GTCATTTTCTAAGTGTACGGAAGATTGTTCCACAGCATAGTCATGATCTT
CTACTCGCTGCAAACGATATGTTGTTCAAATGATTTTTTTTGTATTTACT
GTACTGATGTGTCCGGAGTTAGGCTTACAACGTAGTGAAAGTATCCGTCA
TCAACCACCATATAGTACAAATATTCGTTGCAAAGAACTAGCGTTGCATG
GGCACTCAACCAGGTCTCGTACGACGCAACTGTCCATCCCACCCACCCAG
GTCGATCGAGATTTACTTGTGCTATACGGGGCCCAAGGGCCATGGAGGAA
AAGCCGAGGCGCTCAACGACTTGGGATACGTGCTCTGGGAAGGTTGCGCC
GACACCGTGTTCGCAGGTTAA back to topCoding sequence (CDS) from alignment at H-paniculata_contig3305:2609..16679+ >mRNA_H-paniculata_contig3305.8872.1 ID=mRNA_H-paniculata_contig3305.8872.1|Name=mRNA_H-paniculata_contig3305.8872.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3390bp|location=Sequence derived from alignment at H-paniculata_contig3305:2609..16679+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGACGTGTCTCGCTCCGTTTTTGTTGGCGCCGAATATGCGGGGGTATG
GGAAGCAGAGTCACCCGTCCAGATGGACGTGTCTCGCTCCGTTTTTGTTG
GCGCCGAATATGCGGGGGTATGGGAAGCAGAGTCACCCGTCCAGGTGGTG
CAAGTCAGACGACGGCCGCTCAACACAGTCGGCAGCAGTTCCGCTTCCAG
CACCTCCTTCACGGCGACCTCGGCCGTCTTGCCGCGCCTCGGCGGCGAGA
GTCGCTCTTCTGCCATGCCCGCGCTGCCGAGGGTAGGGTGGGTGGATACC
TCGTCGTCGTCGACATCAAGAGTTCCTCCTTCGGCAGTCAGCACGGCTGG
CGTGGCGGAGGCTTGGGTGTCGCGGGAAGAAGCGCCGTTCGCCGCGCTGC
GGAAGATAGAGGGATCTGGGTCTGCGTGTCGTGCGGCGCGGAGAAAGAGC
GGGAGGACGTCTGTGGTGCAAGTCAGACGACGGCCGCTCAACACAGTCGG
CAGCAGTTCCGCTTCCAGCACCTCCTTCACGGCGACCTCGGCCGTCTTGC
CGCGCCTCGGCGGCGAGAGTCGCTCTTCTGCCATGCCCGCGCTGCCGAGG
GTAGGGTGGGTGGATACCTCGTCGTCGTCGACATCAAGAGTTCCTCCTTC
GGCAGTCAGCACGGCTGGCGTGGCGGAGGCTTGGGTGTCGCGGGAAGAAG
CGCCGTTCGCCGCGCTGCGGAAGATAGAGGGATCTGGGTCTGCGTGTCGT
GCGGCGCGGAGAAAGAGCGGGAGGACGTCTCATCAGAAACCTCGCCGGGA
CAACAGCGGCAACAGTTGTAATAAGGGTCCTGAATGCGGCGTACACTGTG
ACTCCAGACAGCAAAACCACTCCGGCACCATTGACTCCACTGTCCTATCC
AGTAGCCATTGGGCAGCCGGTGGGGGCGCCGCGAGCGTTGAGTCTACGCT
ACCGGAGGGAATCGCGCGAGGTTACCATGCTGTTACACCAAGCACCGCGG
GTTGTGGCAGCGGTGGTTTCGAGTTTGCCGGCAGTGCGGTCGACGTGGAC
GGCAACGGTATGTTGGCGTTGGATAAGAAAGAGCGCTACCGCAGGCCTTC
AGGAGAGGTGGTGGCGGGGAAGGAAACTGATACATGGCCAGGCCGCGGGG
TAACCGAGGCCGCCATCAGCTACACCGCTGTCTCCTCGGCTAGCGGGTCG
TCGGCAAACATGCTGCAGGCGCGAGCTCACGACGCCAGCATTCTTTTCAT
GCCCATGCCGGCGCCCATGCTGCCGAACGCCTCGGCGACTGGACAGCTGC
CGCAAAGGAGACAATCGCGACGGGAGGGTTCGGGGAAAGTCCGAACCGGT
TCTGGGAAAGTCCGCAGCAGTGCCACGACCAATACCAGCAGCAGGAAAGG
TTCCGGGAAAATACGAAACGAAGGTTCCTTTGATGCCGGGAAAAAGCTGA
GAAATGGCTCTGCGAGGAACTTGTCGGCGAAGAAAAGCAGCACTAGTGGT
GGTAGCGGCGCTTTAAGTCGCGCGGGGTCGCGATCAACAGCCCGTGGGGT
GAGTGGCGCGAGCGGTGCGGCAGCCCCCGACGTAGCGTTCAGCGGAAGCC
ACAAGAGCACTCAGAAAGCGAGGAAGAGCGGTCGGAGGTCGTCCGGGAGA
AGCAGGGTAGCGCGGGAGCGTAAGGCGGCGGCGCGAGAGTCTGGGCTAAT
AATGGCTTCGTCGGTGGAGAGGGGGAGGAAGGAGGAGCGGGCCAGGGCGT
GGGAGGAGGATGTGGCTTCTCGGTCGGCGCTGCCCGCGAGGTTGGAACGG
CTCGCGGAGGCTTCTGCTGTTGAGAACGTCGGTGACACATCAGAAACCTC
GCCGGGACAACAGCGGCAACAGTTGTAATAAGGGTCCTGAATGCGGCGTA
CACTGTGACTCCAGACAGCAAAACCACTCCGGCACCATTGACTCCACTGT
CCTATCCAGTAGCCATTGGGCAGCCGGTGGGGGCGCCGCGAGCGTTGAGT
CTACGCTACCGGAGGGAATCGCGCGAGGTTACCATGCTGTTACACCAAGC
ACCGCGGGTTGTGGCAGCGGTGGTTTCGAGTTTGCCGGCAGTGCGGTCGA
CGTGGACGGCAACGGTATGTTGGCGTTGGATAAGAAAGAGCGCTACCGCA
GGCCTTCAGGAGAGGTGGTGGCGGGGAAGGAAACTGATACATGGCCAGGC
CGCGGGGTAACCGAGGCCGCCATCAGCTACACCGCTGTCTCCTCGGCTAG
CGGGTCGTCGGCAAACATGCTGCAGGCGCGAGCTCACGACGCCAGCATTC
TTTTCATGCCCATGCCGGCGCCCATGCTGCCGAACGCCTCGGCGACTGGA
CAGCTGCCGCAAAGGAGACAATCGCGACGGGAGGGTTCGGGGAAAGTCCG
AACCGGTTCTGGGAAAGTCCGCAGCAGTGCCACGACCAATACCAGCAGCA
GGAAAGGTTCCGGGAAAATACGAAACGAAGGTTCCTTTGATGCCGGGAAA
AAGCTGAGAAATGGCTCTGCGAGGAACTTGTCGGCGAAGAAAAGCAGCAC
TAGTGGTGGTAGCGGCGCTTTAAGTCGCGCGGGGTCGCGATCAACAGCCC
GTGGGGTGAGTGGCGCGAGCGGTGCGGCAGCCCCCGACGTAGCGTTCAGC
GGAAGCCACAAGAGCACTCAGAAAGCGAGGAAGAGCGGTCGGAGGTCGTC
CGGGAGAAGCAGGGTAGCGCGGGAGCGTAAGGCGGCGGCGCGAGAGTCTG
GGCTAATAATGGCTTCGTCGGTGGAGAGGGGGAGGAAGGAGGAGCGGGCC
AGGGCGTGGGAGGAGGATGTGGCTTCTCGGTCGGCGCTGCCCGCGAGGTT
GGAACGGCTCGCGGAGGCTTCTGCTGTTGAGAACGTCGGTGACATGCCTA
CGGACCTCCGGAAGGCGTGGATGTGGGACGAATTTCCAGAAGTAGCCAAG
ATGCTCAACGAAGTCGCGGATTCTATGGCCGCAAGAGGCTTTCACGACCA
AGCAGCAGATTTGTTTGAGAGTGCCTACGGACCTCCGGAAGGCGTGGATG
TGGGACGAATTTCCAGAAGTAGCCAAGATGCTCAACGAAGTCGCGGATTC
TATGGCCGCAAGAGGCTTTCACGACCAAGCAGCAGATTTGTTTGAGAGGT
CGATCGAGATTTACTTGTGCTATACGGGGCCCAAGGGCCATGGAGGAAAA
GCCGAGGCGCTCAACGACTTGGGATACGTGCTCTGGGAAGGTTGCGCCGA
CACCGTGTTCGCAGGTTAAGTCGATCGAGATTTACTTGTGCTATACGGGG
CCCAAGGGCCATGGAGGAAAAGCCGAGGCGCTCAACGACTTGGGATACGT
GCTCTGGGAAGGTTGCGCCGACACCGTGTTCGCAGGTTAA back to top
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