prot_H-paniculata_contig3304.8868.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3304.8868.1
Unique Nameprot_H-paniculata_contig3304.8868.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length170
Homology
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BLAST of mRNA_H-paniculata_contig3304.8868.1 vs. uniprot
Match: D8LJD7_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJD7_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 1.410e-13
Identity = 42/78 (53.85%), Postives = 63/78 (80.77%), Query Frame = 0 
Query:    1 MEESVGGLKISLRKAVDDMQMLNARRSNAGRLLDDEEDTWKEESKENEQLAALSEELQRVSRDNVALLDELQKIKSSQ 78
            MEESVG LK S+R+A+D M+ L+A+RSNAG + DDE++T ++E +E  +LA+LS +++RVS++N ALL EL K+K+ Q
Sbjct:  323 MEESVGDLKASVRQALDGMEELHAKRSNAGAIQDDEDETRRKEQQEKLRLASLSADMERVSKENSALLQELAKLKAPQ 400
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BLAST of mRNA_H-paniculata_contig3304.8868.1 vs. uniprot
Match: A0A6H5LKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LKS3_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 4.420e-9
Identity = 45/117 (38.46%), Postives = 68/117 (58.12%), Query Frame = 0 
Query:   57 LQRVSRDNVALLDELQKIKSSQPLTESTCTVHAPEETEAPKTTPVLRLEDGKVSGSEVSPKDRIED--KLSRSSS-HDMVFPSNGERSAITIRVSRNDTCETLCAAIAAKLDIMEAR 170
            ++RVS++N ALL EL K+K+SQ    ST     P   + P    V++ E  +   S+   +D +      SR++S  ++ FP  G R A+ ++VSR  TCETLC +IA KLD+ +AR
Sbjct:    1 MERVSKENSALLQELAKLKASQAAASSTI----PSTIQTPAAVVVVKEESSRPEVSKAVSEDPVAPPPNSSRNTSIWELTFPVKGSRQAVVVQVSRKSTCETLCESIAEKLDVADAR 113
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3304.8868.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJD7_ECTSI1.410e-1353.85C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
A0A6H5LKS3_9PHAE4.420e-938.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 43..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3304contigH-paniculata_contig3304:186..1959 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3304.8868.1mRNA_H-paniculata_contig3304.8868.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3304 154..1959 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3304.8868.1 ID=prot_H-paniculata_contig3304.8868.1|Name=mRNA_H-paniculata_contig3304.8868.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=170bp
MEESVGGLKISLRKAVDDMQMLNARRSNAGRLLDDEEDTWKEESKENEQL
AALSEELQRVSRDNVALLDELQKIKSSQPLTESTCTVHAPEETEAPKTTP
VLRLEDGKVSGSEVSPKDRIEDKLSRSSSHDMVFPSNGERSAITIRVSRN
DTCETLCAAIAAKLDIMEAR
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