prot_H-paniculata_contig33005.8858.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig33005.8858.1
Unique Nameprot_H-paniculata_contig33005.8858.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length57
Homology
BLAST of mRNA_H-paniculata_contig33005.8858.1 vs. uniprot
Match: A0A6H5J8S8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8S8_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 1.020e-21
Identity = 48/57 (84.21%), Postives = 52/57 (91.23%), Query Frame = 0
Query:    1 VLDWLITDRDGVYVDCTLGGGGHSAALLGALGSRARVVGLDRDPAALREASARLSTE 57
            VL+WLIT  DGVYVDCTLGGGGHSAALL ALG+RARV+GLDRDP ALREASARL+ E
Sbjct:  382 VLEWLITKPDGVYVDCTLGGGGHSAALLSALGARARVIGLDRDPDALREASARLTAE 438          
BLAST of mRNA_H-paniculata_contig33005.8858.1 vs. uniprot
Match: D7FXR7_ECTSI (S-adenosyl-methyltransferase MraW n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR7_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 2.530e-21
Identity = 47/57 (82.46%), Postives = 51/57 (89.47%), Query Frame = 0
Query:    1 VLDWLITDRDGVYVDCTLGGGGHSAALLGALGSRARVVGLDRDPAALREASARLSTE 57
            VL+WLIT  DGVYVDCTLGGGGHSAALL ALG+ ARV+GLDRDP ALREASARL+ E
Sbjct:    6 VLEWLITKPDGVYVDCTLGGGGHSAALLSALGAGARVIGLDRDPDALREASARLAAE 62          
BLAST of mRNA_H-paniculata_contig33005.8858.1 vs. uniprot
Match: A0A835Z182_9STRA (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z182_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 6.550e-16
Identity = 39/56 (69.64%), Postives = 45/56 (80.36%), Query Frame = 0
Query:    1 VLDWLITDRDGVYVDCTLGGGGHSAALLGALGSRARVVGLDRDPAALREASARLST 56
            VL+WLITD++G+YVD TLGGGGHS ALL  LGS  RV+GLDRDP AL  AS RL +
Sbjct:    3 VLEWLITDQEGIYVDGTLGGGGHSLALLNTLGSGGRVIGLDRDPEALAAASERLKS 58          
BLAST of mRNA_H-paniculata_contig33005.8858.1 vs. uniprot
Match: A0A2H0JNA9_9BACT (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Bacteroidetes bacterium CG12_big_fil_rev_8_21_14_0_65_60_17 TaxID=1973924 RepID=A0A2H0JNA9_9BACT)

HSP 1 Score: 74.7 bits (182), Expect = 1.590e-14
Identity = 39/56 (69.64%), Postives = 43/56 (76.79%), Query Frame = 0
Query:    1 VLDWLITDRDGVYVDCTLGGGGHSAALLGALGSRARVVGLDRDPAALREASARLST 56
            V D LITD DGVYVD TLGGGGH+ AL  ALG  ARV+GLDRDP AL  A+ARL +
Sbjct:   17 VADRLITDPDGVYVDATLGGGGHTHALFDALGDEARVIGLDRDPEALETATARLES 72          
BLAST of mRNA_H-paniculata_contig33005.8858.1 vs. uniprot
Match: A0A7V5VCF8_9BACT (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7V5VCF8_9BACT)

HSP 1 Score: 72.4 bits (176), Expect = 1.080e-13
Identity = 34/57 (59.65%), Postives = 44/57 (77.19%), Query Frame = 0
Query:    1 VLDWLITDRDGVYVDCTLGGGGHSAALLGALGSRARVVGLDRDPAALREASARLSTE 57
            V+DWL+T+ DG+Y+D TLGGGGH+ ALL  LG  ARV+G+DRD  A+  AS RL+ E
Sbjct:    5 VIDWLVTNPDGIYIDATLGGGGHTTALLQKLGVNARVIGIDRDTEAIDAASRRLAGE 61          
BLAST of mRNA_H-paniculata_contig33005.8858.1 vs. uniprot
Match: UPI001423BCA7 (16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH n=1 Tax=Rhodocaloribacter litoris TaxID=2558931 RepID=UPI001423BCA7)

HSP 1 Score: 71.6 bits (174), Expect = 2.470e-13
Identity = 37/57 (64.91%), Postives = 42/57 (73.68%), Query Frame = 0
Query:    1 VLDWLITDRDGVYVDCTLGGGGHSAALLGALGSRARVVGLDRDPAALREASARLSTE 57
            V++ L+TD DGVYVD TLGGGGH+AALL  L    RV+GLDRDPAAL    ARL  E
Sbjct:   32 VVEGLVTDPDGVYVDATLGGGGHTAALLDVLAPGGRVIGLDRDPAALAAVRARLPAE 88          
BLAST of mRNA_H-paniculata_contig33005.8858.1 vs. uniprot
Match: A0A7Y2ERI3_9BACT (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Rhodothermales bacterium TaxID=2306054 RepID=A0A7Y2ERI3_9BACT)

HSP 1 Score: 70.9 bits (172), Expect = 4.460e-13
Identity = 36/57 (63.16%), Postives = 42/57 (73.68%), Query Frame = 0
Query:    1 VLDWLITDRDGVYVDCTLGGGGHSAALLGALGSRARVVGLDRDPAALREASARLSTE 57
            V++ LITD  G YVDCTLGGGGHS ALL  L   A V+G+DRDP A+REA  RLS +
Sbjct:   22 VVEILITDPAGTYVDCTLGGGGHSHALLDVLAPEATVIGIDRDPEAIREARRRLSAD 78          
BLAST of mRNA_H-paniculata_contig33005.8858.1 vs. uniprot
Match: A0A359EWX9_9FIRM (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Acidaminococcaceae bacterium TaxID=2049052 RepID=A0A359EWX9_9FIRM)

HSP 1 Score: 70.5 bits (171), Expect = 5.650e-13
Identity = 32/53 (60.38%), Postives = 41/53 (77.36%), Query Frame = 0
Query:    2 LDWLITDRDGVYVDCTLGGGGHSAALLGALGSRARVVGLDRDPAALREASARL 54
            +DWL+TDRDG+YVDCTLGG GHSA ++  L  + R+VG+D+D  AL  AS RL
Sbjct:   14 IDWLVTDRDGIYVDCTLGGAGHSAEIVSHLSDQGRLVGIDQDDDALAAASERL 66          
BLAST of mRNA_H-paniculata_contig33005.8858.1 vs. uniprot
Match: A0A271J7L3_9BACT (Ribosomal RNA small subunit methyltransferase H n=2 Tax=Rubrivirga marina TaxID=1196024 RepID=A0A271J7L3_9BACT)

HSP 1 Score: 68.6 bits (166), Expect = 3.380e-12
Identity = 38/54 (70.37%), Postives = 42/54 (77.78%), Query Frame = 0
Query:    2 LDWLITDRDGVYVDCTLGGGGHSAALLGALGSRARVVGLDRDPAALREASARLS 55
            LD LITD  G+YVD TLGGGGHSAALL ALG  A VVG+D+DP AL  A ARL+
Sbjct:   31 LDLLITDPAGLYVDGTLGGGGHSAALLDALGEGALVVGIDQDPEALATARARLA 84          
BLAST of mRNA_H-paniculata_contig33005.8858.1 vs. uniprot
Match: A0A522BH68_9BACT (Ribosomal RNA small subunit methyltransferase H n=1 Tax=bacterium TaxID=1869227 RepID=A0A522BH68_9BACT)

HSP 1 Score: 67.8 bits (164), Expect = 6.100e-12
Identity = 34/54 (62.96%), Postives = 42/54 (77.78%), Query Frame = 0
Query:    2 LDWLITDRDGVYVDCTLGGGGHSAALLGALGSRARVVGLDRDPAALREASARLS 55
            ++ LITDR+GVYVD TLGGGGH+ A+L ALG   R++G+DRDP AL E   RLS
Sbjct:   31 VESLITDREGVYVDGTLGGGGHARAILEALGPGGRLIGIDRDPEALEECRKRLS 84          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig33005.8858.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J8S8_9PHAE1.020e-2184.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXR7_ECTSI2.530e-2182.46S-adenosyl-methyltransferase MraW n=1 Tax=Ectocarp... [more]
A0A835Z182_9STRA6.550e-1669.64Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A2H0JNA9_9BACT1.590e-1469.64Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A7V5VCF8_9BACT1.080e-1359.65Ribosomal RNA small subunit methyltransferase H n=... [more]
UPI001423BCA72.470e-1364.9116S rRNA (cytosine(1402)-N(4))-methyltransferase R... [more]
A0A7Y2ERI3_9BACT4.460e-1363.16Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A359EWX9_9FIRM5.650e-1360.38Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A271J7L3_9BACT3.380e-1270.37Ribosomal RNA small subunit methyltransferase H n=... [more]
A0A522BH68_9BACT6.100e-1262.96Ribosomal RNA small subunit methyltransferase H n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002903Ribosomal RNA small subunit methyltransferase HPFAMPF01795Methyltransf_5coord: 2..55
e-value: 7.0E-13
score: 48.7
IPR002903Ribosomal RNA small subunit methyltransferase HPANTHERPTHR11265S-ADENOSYL-METHYLTRANSFERASE MRAWcoord: 1..55
NoneNo IPR availableGENE3D3.40.50.150coord: 1..57
e-value: 5.7E-16
score: 61.0
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 1..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig33005contigH-paniculata_contig33005:228..398 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig33005.8858.1mRNA_H-paniculata_contig33005.8858.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig33005 228..398 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig33005.8858.1 ID=prot_H-paniculata_contig33005.8858.1|Name=mRNA_H-paniculata_contig33005.8858.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=57bp
VLDWLITDRDGVYVDCTLGGGGHSAALLGALGSRARVVGLDRDPAALREA
SARLSTE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002903RsmH
IPR029063SAM-dependent_MTases