prot_H-paniculata_contig32964.8837.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig32964.8837.1
Unique Nameprot_H-paniculata_contig32964.8837.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length118
Homology
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BLAST of mRNA_H-paniculata_contig32964.8837.1 vs. uniprot
Match: D8LRM9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM9_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 2.050e-17
Identity = 49/92 (53.26%), Postives = 64/92 (69.57%), Query Frame = 0 
Query:    1 MADNPAPVVPTT-RDMQKISLSSKDAPISSAVVFIQPQNKAEIRRVISITPK-MLGLHEVELVGLPGPHYIDEQSVTVSGSGYCTILDVSLS 90
            MA++ +P VP    D QK+S SS DAP+  A V+   +N+AEI RV+S +P   +GLH+VEL GLP    I+EQS+TV GSG+CTILD S S
Sbjct:    1 MANSTSPTVPNACSDPQKVSFSSLDAPVKRATVY---KNRAEITRVVSFSPTDRVGLHKVELTGLPWNGSIEEQSLTVKGSGHCTILDASFS 89
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BLAST of mRNA_H-paniculata_contig32964.8837.1 vs. uniprot
Match: D8LRN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRN7_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 4.190e-13
Identity = 44/90 (48.89%), Postives = 57/90 (63.33%), Query Frame = 0 
Query:    5 PAPVVPTTRDMQKISLSSKDAPISSAVVFIQPQNKAEIRRVISIT-PKMLGLHEVELVGLPGPHYIDEQSVTVSGSGYCTILDVSLSNTP 93
            P P VP     + +S SS DAPI +  VF   + KAE+ R+I+ + P  LG HEVEL  LP   +ID+ SV V+GSG+CTIL+VS S  P
Sbjct:    7 PPPSVPGADAPKAVSFSSSDAPIQAVTVF--RKGKAEVTRIINFSSPSSLGRHEVELADLPRS-FIDQTSVRVTGSGHCTILNVSYSEEP 93
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig32964.8837.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRM9_ECTSI2.050e-1753.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LRN7_ECTSI4.190e-1348.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025554Domain of unknown function DUF4140PFAMPF13600DUF4140coord: 38..94
e-value: 7.4E-9
score: 35.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig32964contigH-paniculata_contig32964:1525..2264 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig32964.8837.1mRNA_H-paniculata_contig32964.8837.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig32964 1327..2583 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig32964.8837.1 ID=prot_H-paniculata_contig32964.8837.1|Name=mRNA_H-paniculata_contig32964.8837.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=118bp
MADNPAPVVPTTRDMQKISLSSKDAPISSAVVFIQPQNKAEIRRVISITP
KMLGLHEVELVGLPGPHYIDEQSVTVSGSGYCTILDVSLSNTPVGGDALQ
IVSQQTYYENYTDVISA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025554DUF4140