prot_H-paniculata_contig32702.8779.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig32702.8779.1
Unique Nameprot_H-paniculata_contig32702.8779.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length106
Homology
BLAST of mRNA_H-paniculata_contig32702.8779.1 vs. uniprot
Match: D7FV42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV42_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 1.330e-29
Identity = 60/109 (55.05%), Postives = 70/109 (64.22%), Query Frame = 0
Query:    1 MACLDGFTDDSTH--IVYCDGCGIPVHQSCYGIQDIKADFFCDRCLELTKLAKPGKIPVSS-VKCALCLVIHGAMKRTIDGQFVHIACLMTAPGARMSDLVKKTKIDIS 106
            M C DG TD+S +  IVYCDGC + VH  CYGIQD KADF CDRC  L +L    K      V C LC  IHGA+KRT  G+F H+ CL+ +PG RM DL  K +IDIS
Sbjct:  886 MVCFDGSTDESGNLTIVYCDGCDMSVHTDCYGIQDPKADFVCDRCTRLRELEAESKQTTGDEVNCFLCPNIHGALKRTTCGRFAHMTCLLMSPGVRMGDLKHKRRIDIS 994          
BLAST of mRNA_H-paniculata_contig32702.8779.1 vs. uniprot
Match: A0A6H5LHH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LHH7_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 1.330e-29
Identity = 60/109 (55.05%), Postives = 71/109 (65.14%), Query Frame = 0
Query:    1 MACLDGFTDDSTH--IVYCDGCGIPVHQSCYGIQDIKADFFCDRCLELTKLAKPGK-IPVSSVKCALCLVIHGAMKRTIDGQFVHIACLMTAPGARMSDLVKKTKIDIS 106
            M C DG TD+S +  IVYCDGC + VH  CYGIQD KADF CDRC  L +L    K +    V C LC  IHGA+KRT  G+F H+ CL+ +PG RM DL  K +IDIS
Sbjct:  786 MVCFDGSTDESGNLTIVYCDGCDMSVHTDCYGIQDPKADFVCDRCTRLRELEAGSKQMTGDEVNCFLCPNIHGALKRTTCGRFAHMTCLLMSPGVRMGDLKHKKRIDIS 894          
BLAST of mRNA_H-paniculata_contig32702.8779.1 vs. uniprot
Match: A0A1V9ZCG9_9STRA (Kinesin n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZCG9_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 5.010e-20
Identity = 41/98 (41.84%), Postives = 66/98 (67.35%), Query Frame = 0
Query:    1 MACLDGFTDDSTHIVYCDGCGIPVHQSCYGIQDI-KADFFCDRCLELTKLAKPGKIPVSSVKCALCLVIHGAMKRTIDGQFVHIACLMTAPGARMSDL 97
            + C DG ++DS  I++CD C I VHQ CYG+ +I K++FFCDRC+         K P + V C LC +  GA+K+T++G +VH+AC + +P A+++++
Sbjct:  781 VICFDGVSEDSNPIIFCDNCDIAVHQRCYGVAEIPKSEFFCDRCIA------QRKNPCALVFCQLCPMRDGALKQTMEGAWVHVACALWSPSAQIANI 872          
BLAST of mRNA_H-paniculata_contig32702.8779.1 vs. uniprot
Match: A0A7S1G3S2_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G3S2_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 2.110e-18
Identity = 44/107 (41.12%), Postives = 62/107 (57.94%), Query Frame = 0
Query:    1 MACLDGFTDDSTHIVYCDGCGIPVHQSCYGIQDIK-ADFFCDRCLELTKLAKPGKIPVSSVKCALCLVIHGAMKRTIDGQFVHIACLMTAPGARMSDLVKKTKIDIS 106
            + C DG +  +  IVYCDGC +  HQSCYG+Q I   D++CDRC    +  K G      V CALC    GA+K T DG++ H+ C +  PG  +S++ +   ID+S
Sbjct:  711 VVCFDGDSTATNEIVYCDGCNVGAHQSCYGVQTIPDGDWYCDRC----RYIKNGG-DRRHVTCALCPFADGALKPTNDGRWAHVVCALWTPGVWISNVTRMVGIDLS 812          
BLAST of mRNA_H-paniculata_contig32702.8779.1 vs. uniprot
Match: A0A3R6YYM7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YYM7_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 5.260e-18
Identity = 39/91 (42.86%), Postives = 60/91 (65.93%), Query Frame = 0
Query:    1 MACLDGFTDDSTHIVYCDGCGIPVHQSCYGIQDI-KADFFCDRCLELTKLAKPGKIPVSSVKCALCLVIHGAMKRTIDGQFVHIACLMTAP 90
            + C+DG+++DS  I++CD C + VHQ CYG+  I K+DF+CD+C      AK   +P    +CALC   HGA+K+T++G +VH+ C +  P
Sbjct:  712 VVCMDGYSEDSNPIIFCDKCDVAVHQRCYGVATIPKSDFYCDKCS-----AKGPVVP----QCALCPHPHGALKQTVEGLWVHVFCALWCP 793          
BLAST of mRNA_H-paniculata_contig32702.8779.1 vs. uniprot
Match: D3BEQ0_POLPP (PHD zinc finger-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BEQ0_POLPP)

HSP 1 Score: 87.8 bits (216), Expect = 5.310e-18
Identity = 41/89 (46.07%), Postives = 57/89 (64.04%), Query Frame = 0
Query:    3 CLDGFTDDSTHIVYCDGCGIPVHQSCYGIQDI-KADFFCDRCLELTKLAKPGKIPVSSVKCALCLVIHGAMKRTIDGQFVHIACLMTAP 90
            C DG +DD+  IVYCDGC I VHQ CYGI+ I +  +FC +C        P K  +S   C LC + +GA+K+T+DG++VH+ CL+  P
Sbjct:  369 CFDGTSDDTNQIVYCDGCDIAVHQECYGIRLIPEGHWFCQKC------ESPAKATIS---CRLCNMKNGALKQTVDGEWVHLVCLLNIP 448          
BLAST of mRNA_H-paniculata_contig32702.8779.1 vs. uniprot
Match: A0A024UN41_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UN41_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 5.330e-18
Identity = 39/91 (42.86%), Postives = 60/91 (65.93%), Query Frame = 0
Query:    1 MACLDGFTDDSTHIVYCDGCGIPVHQSCYGIQDI-KADFFCDRCLELTKLAKPGKIPVSSVKCALCLVIHGAMKRTIDGQFVHIACLMTAP 90
            + C+DG+++DS  I++CD C + VHQ CYG+  I K+DF+CD+C      AK   +P    +CALC   HGA+K+T++G +VH+ C +  P
Sbjct:  849 VVCMDGYSEDSNPIIFCDKCDVAVHQRCYGVATIPKSDFYCDKCS-----AKGPVVP----QCALCPHPHGALKQTVEGLWVHVFCALWCP 930          
BLAST of mRNA_H-paniculata_contig32702.8779.1 vs. uniprot
Match: A0A6G0X3X1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X3X1_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 4.690e-17
Identity = 37/91 (40.66%), Postives = 57/91 (62.64%), Query Frame = 0
Query:    1 MACLDGFTDDSTHIVYCDGCGIPVHQSCYGIQDI-KADFFCDRCLELTKLAKPGKIPVSSVKCALCLVIHGAMKRTIDGQFVHIACLMTAP 90
            + C+DG ++D+  I++CD C + VHQ CYG+  I K+DFFCDRC           +    V+CALC    GA+K+T++G+++H+ C M  P
Sbjct:  803 VVCMDGTSEDANPIIFCDRCDLAVHQRCYGVATIPKSDFFCDRC-----------VANEPVQCALCPHPGGALKKTVEGKWIHLVCAMWCP 882          
BLAST of mRNA_H-paniculata_contig32702.8779.1 vs. uniprot
Match: A0A3L6UXH1_9STRA (PHD-type domain-containing protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6UXH1_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.930e-15
Identity = 37/91 (40.66%), Postives = 59/91 (64.84%), Query Frame = 0
Query:    1 MACLDGFTDDSTHIVYCDGCGIPVHQSCYGIQDI-KADFFCDRCLELTKLAKPGKIPVSSVKCALCLVIHGAMKRTIDGQFVHIACLMTAP 90
            + C+DG +++S  I++CD C + VHQ CYG+  I K+DFFC++C      +  G   V + +CALC   HGA+K+T++G +VH+ C +  P
Sbjct:  460 VICMDGTSEESNPIIFCDKCDVAVHQRCYGVATIPKSDFFCNKC------SVKG---VVAPQCALCPHPHGALKQTVEGHWVHVFCGLWCP 541          
BLAST of mRNA_H-paniculata_contig32702.8779.1 vs. uniprot
Match: W4H4H3_9STRA (Uncharacterized protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H4H3_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 2.680e-15
Identity = 37/91 (40.66%), Postives = 58/91 (63.74%), Query Frame = 0
Query:    1 MACLDGFTDDSTHIVYCDGCGIPVHQSCYGIQDI-KADFFCDRCLELTKLAKPGKIPVSSVKCALCLVIHGAMKRTIDGQFVHIACLMTAP 90
            + C+DG +++S  I++CD C + VHQ CYG+  I K+DFFC +C      +  G   V + +CALC   HGA+K+T++G +VH+ C +  P
Sbjct:  828 VICMDGTSEESNPIIFCDKCDVAVHQRCYGVATIPKSDFFCSKC------SVKG---VVAPQCALCPHPHGALKQTVEGHWVHVFCGLWCP 909          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig32702.8779.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV42_ECTSI1.330e-2955.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LHH7_9PHAE1.330e-2955.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1V9ZCG9_9STRA5.010e-2041.84Kinesin n=1 Tax=Thraustotheca clavata TaxID=74557 ... [more]
A0A7S1G3S2_9STRA2.110e-1841.12Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A3R6YYM7_9STRA5.260e-1842.86Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
D3BEQ0_POLPP5.310e-1846.07PHD zinc finger-containing protein n=1 Tax=Polysph... [more]
A0A024UN41_9STRA5.330e-1842.86Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A6G0X3X1_9STRA4.690e-1740.66Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A3L6UXH1_9STRA1.930e-1540.66PHD-type domain-containing protein (Fragment) n=3 ... [more]
W4H4H3_9STRA2.680e-1540.66Uncharacterized protein n=10 Tax=Aphanomyces astac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13831PHD_2coord: 14..43
e-value: 2.5E-11
score: 42.9
NoneNo IPR availablePFAMPF13832zf-HC5HC2H_2coord: 61..105
e-value: 3.4E-8
score: 33.6
NoneNo IPR availablePANTHERPTHR13793PHD FINGER PROTEINScoord: 3..95
NoneNo IPR availablePANTHERPTHR13793:SF107BR140, ISOFORM Acoord: 3..95
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..50
e-value: 6.2E-13
score: 50.0
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 2..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig32702contigH-paniculata_contig32702:1668..2351 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig32702.8779.1mRNA_H-paniculata_contig32702.8779.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig32702 1656..2351 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig32702.8779.1 ID=prot_H-paniculata_contig32702.8779.1|Name=mRNA_H-paniculata_contig32702.8779.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=106bp
MACLDGFTDDSTHIVYCDGCGIPVHQSCYGIQDIKADFFCDRCLELTKLA
KPGKIPVSSVKCALCLVIHGAMKRTIDGQFVHIACLMTAPGARMSDLVKK
TKIDIS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR011011Znf_FYVE_PHD