prot_H-paniculata_contig3265.8772.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3265.8772.1
Unique Nameprot_H-paniculata_contig3265.8772.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length269
Homology
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BLAST of mRNA_H-paniculata_contig3265.8772.1 vs. uniprot
Match: A0A6H5JUF7_9PHAE (GCFC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUF7_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 2.340e-8
Identity = 63/137 (45.99%), Postives = 69/137 (50.36%), Query Frame = 0 
Query:  132 PVLSFGHEDEXXXXXXXXXXXXXXXXXXXXXXXXFRVKKSKASKAIARASKDG-KVPAAEQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRSSWHNATAGMYTAEGLAALRKSQAFTPKPSAS-SRER 266
            PVLSFGH   XXXXXXXXX               FRVKKSKASKA+A+A+K+  ++P A Q                                      R SWH ATAGMYT EGLA LR SQAFTPKPS   SRER
Sbjct:   74 PVLSFGHXXXXXXXXXXXXAAAGKGADGF-----FRVKKSKASKAMAKAAKEKTELPVAPQNNSA----------------------------------RGSWHTATAGMYTKEGLAELRSSQAFTPKPSGGRSRER 171
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3265.8772.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JUF7_9PHAE2.340e-845.99GCFC domain-containing protein n=2 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3265contigH-paniculata_contig3265:10155..11814 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3265.8772.1mRNA_H-paniculata_contig3265.8772.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3265 10155..11814 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3265.8772.1 ID=prot_H-paniculata_contig3265.8772.1|Name=mRNA_H-paniculata_contig3265.8772.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=269bp
PPRAKGQTTQSSSMFKPRKKDRKRVVVRRSSKAEESSDEDPTELSKSPAV
AAASANVEMSIGDDGYFSDASVGTAPTPAAPPTPATEPNATSTTVTTAVA
SDSSNNSRVKKMRKKVKGGGKGGAEKSKGPKPVLSFGHEDEEDGLGGMVG
RKGGGDGGDRGAGGSFRVKKSKASKAIARASKDGKVPAAEQTTTTTPSPS
AAAAAATSSKKNGVTANPPPLSSTAAASKRSSWHNATAGMYTAEGLAALR
KSQAFTPKPSASSRERGRG
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