prot_H-paniculata_contig32574.8760.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig32574.8760.1
Unique Nameprot_H-paniculata_contig32574.8760.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length85
Homology
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BLAST of mRNA_H-paniculata_contig32574.8760.1 vs. uniprot
Match: D7FWB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWB6_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 9.630e-27
Identity = 61/87 (70.11%), Postives = 70/87 (80.46%), Query Frame = 0 
Query:    2 DPTTGAVTTLAKVVLDRGVSWEQALAKRVEATEAGMDPRPKADGTRTAG---PNGTGFYRSFHTDITTQRRLVLLAVRKARHHRLMV 85
            DP TGAVT LA+VVLDRGVSW+QALAKR EA +AGMD   K     T+G   P GTGFYRS HTDIT+QR+LV+LAVRKA+H+RLMV
Sbjct:  910 DPATGAVTQLAQVVLDRGVSWDQALAKRSEAADAGMDEAVKP----TSGAKPPKGTGFYRSRHTDITSQRKLVVLAVRKAKHNRLMV 992
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig32574.8760.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWB6_ECTSI9.630e-2770.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig32574contigH-paniculata_contig32574:524..2413 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig32574.8760.1mRNA_H-paniculata_contig32574.8760.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig32574 506..2413 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig32574.8760.1 ID=prot_H-paniculata_contig32574.8760.1|Name=mRNA_H-paniculata_contig32574.8760.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=85bp
MDPTTGAVTTLAKVVLDRGVSWEQALAKRVEATEAGMDPRPKADGTRTAG
PNGTGFYRSFHTDITTQRRLVLLAVRKARHHRLMV
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