prot_H-paniculata_contig3257.8758.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3257.8758.1
Unique Nameprot_H-paniculata_contig3257.8758.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length131
Homology
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BLAST of mRNA_H-paniculata_contig3257.8758.1 vs. uniprot
Match: D8LJX0_ECTSI (MutS protein homolog 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX0_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 3.660e-13
Identity = 35/45 (77.78%), Postives = 43/45 (95.56%), Query Frame = 0 
Query:   58 QGAELLKRLASGSVDAEMVSKYTALAASYCLLRYIENNTGHAFAN 102
            +GAELLKRLASGSVDA+++SKYTALAASYCL+RY+EN+TG  FA+
Sbjct:   76 KGAELLKRLASGSVDADLMSKYTALAASYCLIRYVENSTGSTFAD 120
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BLAST of mRNA_H-paniculata_contig3257.8758.1 vs. uniprot
Match: A0A836CNW6_9STRA (Muts protein 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNW6_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.210e-7
Identity = 40/139 (28.78%), Postives = 60/139 (43.17%), Query Frame = 0 
Query:   27 SNASFKVCAIVENRARETCIATIDTAHSSVLQ----------------------------------------------------------------GAELLKRLASGSVDAEMVSKYTALAASYCLLRYIENNTGHAFA 101
            SN+   VCA+VENR+RETC+A  +T+H+S+L+                                                                GAELL+R+++ ++ A++ + Y  LAA+ CLLRY+EN TGH  A
Sbjct:   51 SNSGLVVCAVVENRSRETCVAVTNTSHASLLEITTLSDTQSYAQTMAHLESLQPQEILLHDGARSRVLSLKIVEAFHKDDESRVLFVSRQYFDQDKGAELLRRISTKNLGADVFATYIVLAATNCLLRYVENITGHGHA 189
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3257.8758.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJX0_ECTSI3.660e-1377.78MutS protein homolog 4 n=1 Tax=Ectocarpus siliculo... [more]
A0A836CNW6_9STRA1.210e-728.78Muts protein 4 n=1 Tax=Tribonema minus TaxID=30337... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3257contigH-paniculata_contig3257:3485..9804 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3257.8758.1mRNA_H-paniculata_contig3257.8758.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3257 3422..9908 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3257.8758.1 ID=prot_H-paniculata_contig3257.8758.1|Name=mRNA_H-paniculata_contig3257.8758.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=131bp
MACPPPPSKKKKFSDAGAAARGCGSNSNASFKVCAIVENRARETCIATID
TAHSSVLQGAELLKRLASGSVDAEMVSKYTALAASYCLLRYIENNTGHAF
ANGRSVACVEAMNPKARSEGSGVTSAPVAG*
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