prot_H-paniculata_contig32218.8677.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig32218.8677.1
Unique Nameprot_H-paniculata_contig32218.8677.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length218
Homology
BLAST of mRNA_H-paniculata_contig32218.8677.1 vs. uniprot
Match: A0A2N9FGB3_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FGB3_FAGSY)

HSP 1 Score: 110 bits (274), Expect = 3.750e-24
Identity = 75/222 (33.78%), Postives = 122/222 (54.95%), Query Frame = 0
Query:    2 LTLFVDDILITGPSETLLIGVHNDLMKKFYITDLGNVSLRLGMEVTRNKIQKPSIR----KVMQQTADDTQLNEQGIKQYQAIVGSLIFLTQCTRFDICYSVSQAARFMSKPYASCGGTEETRTKSTTGSMLFLASGLVHFSSSLQRITATSSTGAELVALPTCEKQGIYLSNLLMELGRMQ-LSKD-KVLCDNKGALHLASNANLRSRSKHIAIRFAALRE 217
            L L+VDDIL+      LL  V   L K F + D+G  S  +G+++ R++ Q P ++     + Q   +D +  +     Y + VGSL++   CTR +I ++V    R+ S P +   G  ++R KST+G +  +ASG V + S+ Q +TATS+  AE V+       G++L + +  L  M  +S+  ++ CDN  A+ +A N    SRSKHI I++ A+RE
Sbjct:  673 LVLYVDDILLATNDNGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFQAPIVKGDRFNLNQCPKNDLEREQMKNIPYASAVGSLMYAQVCTRPNIAFAVGMLGRYQSDPDSDFAGCIDSR-KSTSGYIFLMASGAVSWRSAKQTLTATSTMEAEFVSCFEATSHGVWLKSFISGLRIMDSISRPLRIYCDNSVAIFMAKNNKSGSRSKHIDIKYLAIRE 893          
BLAST of mRNA_H-paniculata_contig32218.8677.1 vs. uniprot
Match: A0A6H5K9R3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9R3_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 3.690e-22
Identity = 84/248 (33.87%), Postives = 120/248 (48.39%), Query Frame = 0
Query:    1 MLTLFVDDILITGPSETLLIGVHNDLMKKFYITDLGNVSLRLGMEVTRNK-------IQKPSIRKVMQQTA-------DDTQLNEQGIKQYQAIVGSLIFLTQCTRFDICYSVSQAARFMSKPYASCGGTEETRTKSTTGSMLFLASGLVHFSSSLQRITA-------------TSSTG----AELVALPTCEKQGIYLSNLLMELGRMQLSKDKVLCDNKGALHLASNANLRSRSKHIAIRFAALRE 217
            +LTL+V+DILI+G    L+  +  +L  +F ITD+G V L LGM+VTR+         QK  ++ +++           D  L     K YQ+I GSL++L QC R+D  Y+V+Q  R  SKP         T  K     +      L+ F     R+ A              S+TG    +EL A+    K+  YLS+LLM L    L    +  D+ G L LA+N    SR+KHIA+RF  L+E
Sbjct:  573 ILTLYVNDILISGKDPDLVADLKKELQDRFEITDIGEVRLILGMKVTRSYENGTLVVSQKGYVKSILESLGMENCNPPADELLGAAESKLYQSITGSLLYLAQCKRYDQSYAVNQLTRACSKP----ARAHTTAAKHALRYIRGTPDLLIIFKRGRFRVAAFADSSFGAIPDNRKSTTGLQVESELQAISYGAKEAAYLSSLLMALKFENLKPISIYSDSSGTLSLAANTMFSSRTKHIALRFFVLQE 816          
BLAST of mRNA_H-paniculata_contig32218.8677.1 vs. uniprot
Match: A0A438ES44_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438ES44_VITVI)

HSP 1 Score: 104 bits (259), Expect = 3.840e-22
Identity = 73/219 (33.33%), Postives = 117/219 (53.42%), Query Frame = 0
Query:    2 LTLFVDDILITGPSETLLIGVHNDLMKKFYITDLGNVSLRLGMEVTRNKIQKPSIRKVMQQTA-DDTQLNEQGIKQYQAIVGSLIFLTQCTRFDICYSVSQAARFMSKPYASCGGTEETRTKSTTGSMLFLASGLVHFSSSLQRITATSSTGAELVALPTCEKQGIYLSNLLMELGRMQ-LSKD-KVLCDNKGALHLASNANLRSRSKHIAIRFAALRE 217
            L L+VDDIL+    + LL  V   L K F + D+G  S  +G+++ R++ +    R  + Q   +D ++ +     Y   VGSL++   CTR DI ++V    R+ S P +   G  ++R KST G +  LA G + + S  Q +TATS+  AE ++       G++L + +  L  M  +S+   + CDN  A+ +A N    SRSKHI I++ A+RE
Sbjct:  806 LVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFKVKGDRFNLNQCPKNDLEMEQMKNIPYAYAVGSLMYAQVCTRPDIAFAVGMLGRYQSNPDSDFAGCVDSR-KSTFGYIFILAGGAISWRSVKQTMTATSTMEAEFISCFEAISHGVWLKSFIYGLRVMDSISRPLSIYCDNSAAVFMAKNNKSGSRSKHINIKYLAIRE 1023          
BLAST of mRNA_H-paniculata_contig32218.8677.1 vs. uniprot
Match: A0A438JV93_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JV93_VITVI)

HSP 1 Score: 102 bits (253), Expect = 2.370e-21
Identity = 75/246 (30.49%), Postives = 131/246 (53.25%), Query Frame = 0
Query:    2 LTLFVDDILITGPSETLLIGVHNDLMKKFYITDLGNVSLRLGMEVTR-----------------NKIQKPSIRKVMQQTADDTQLNEQGIKQ------YQAIVGSLIFLTQCTRFDICYSVSQAARFMS----KPYAS---CGGTEETRTKSTTGSMLFLASGLVHFSSSLQRITATSSTGAELVALPTCEKQGIYLSNLLMELGRMQLSKDKVLCDNKGALHLASNANLRSRSKHIAIRFAALRE 217
            L+L+VDD+L+TG +  LL     ++   F ++DLG ++  LGME+ +                  K +  S ++V    A + ++++   ++      Y+++VGSL++LT  TR D+ +  S  +RFM       YA     G  ++   KST+G +  + SG++ ++S  Q + A S+T AE ++L     Q I+L  LL +LG+ Q S  ++ CDNK A+ +  N     R+KHI ++F ++RE
Sbjct:  646 LSLYVDDMLVTGSNVKLLADFKMEMQDVFEMSDLGIMNYFLGMEIYQCSWGIFISQRKYAMDILKKFKLESCKEVATPLAQNEKISKNDGEKLEEPSAYRSLVGSLLYLT-VTRPDLMFPASLLSRFMRGVKLDGYADSDWAGSVDDM--KSTSGYVFTIGSGVICWNSRKQEVVAQSTTEAEYISLAAAANQAIWLRKLLADLGQEQSSPTELYCDNKSAISITQNPVQHGRTKHINVKFHSIRE 888          
BLAST of mRNA_H-paniculata_contig32218.8677.1 vs. uniprot
Match: A0A151U0L5_CAJCA (Copia protein n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151U0L5_CAJCA)

HSP 1 Score: 89.7 bits (221), Expect = 3.940e-18
Identity = 63/194 (32.47%), Postives = 98/194 (50.52%), Query Frame = 0
Query:   24 NDLMKKFYITDLGNVSLRLGMEVTRNKIQKPSIRKVMQQTADDTQLNEQGIKQYQAIVGSLIFLTQCTRFDICYSVSQAARFMSKPYASCGGTEETRTKSTTGSMLFLASGLVHFSSSLQRITATSSTGAELVALPTCEKQGIYLSNLLMELGRMQLSKDKVLCDNKGALHLASNANLRSRSKHIAIRFAALRE 217
            NDL+KKF + +   VS  L +    +K    +        AD T        QY+++VGSL++LT  TR D+ +  S  +RFM  P  +  G  +   +   G +  L SG+  ++S  Q + A SS  AE VA      Q I++  +L +L  +Q+    + CDNK A+ +A N     R+KHI ++F A+RE
Sbjct:   31 NDLLKKFKLENCNPVSTPLAVNEKLSKADGDA-------KADVT--------QYRSLVGSLLYLT-ATRPDLMFCSSLLSRFMHSPSLTHFGVGKRVLRYLKGYVFSLGSGVFSWNSKKQDVVAQSSAEAEYVAAAAASNQAIWVRKVLTDLSHVQMEPTVLWCDNKSAISIAKNPIQHGRTKHINVKFHAIRE 208          
BLAST of mRNA_H-paniculata_contig32218.8677.1 vs. uniprot
Match: A0A2N9IKJ5_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IKJ5_FAGSY)

HSP 1 Score: 91.3 bits (225), Expect = 1.270e-17
Identity = 71/234 (30.34%), Postives = 114/234 (48.72%), Query Frame = 0
Query:    2 LTLFVDDILITGPSETLLIGVHNDLMKKFYITDLGNVSLRLGMEVTRNKIQKPSIRKVMQQTADDTQLNEQGIKQYQAIVGSLIFLTQCTRFDICYSVSQAARFMSKPYAS-----------CGGTEE-----TRTKSTTGSMLFLASGLVHFSSSLQRITATSSTGAELVALPTCEKQGIYLSNLLMELGRMQ-LSKD-KVLCDNKGALHLASNANLRSRSKHIAIRFAALRE 217
            L L+VDDIL+    + LL  V   L K F + D+G  S  +G+++ R++ Q   ++ +                 Y + VGSL++   CTR DI ++V    R+ S P                GT++      RT+ +   +  +ASG V + S+ Q + ATS+  AE V+       G++L + +  L  M  +S+  K+ CDN  A+ +A N    SRSKHI I++ A+RE
Sbjct:  737 LVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFQGNRMKNI----------------PYASAVGSLMYAQVCTRPDIAFAVGMLGRYQSDPGLDHWRAAKKVMRYLQGTKDYMLMYRRTEQSGRYIFMMASGAVSWRSAKQTLIATSTMEAEFVSCFEATSHGVWLKSFISGLRIMDSISRPLKIYCDNSAAVFMAKNNKSGSRSKHIDIKYLAIRE 954          
BLAST of mRNA_H-paniculata_contig32218.8677.1 vs. uniprot
Match: A0A1R3HGA4_COCAP (Integrase, catalytic core n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3HGA4_COCAP)

HSP 1 Score: 90.5 bits (223), Expect = 2.470e-17
Identity = 67/242 (27.69%), Postives = 127/242 (52.48%), Query Frame = 0
Query:    1 MLTLFVDDILITGPSETLLIGVHNDLMKKFYITDLGNVSLRLGMEVTR---------NKIQKPSIRK--------------VMQQTADDTQLNEQGIKQYQAIVGSLIFLTQCTRFDICYSVSQAAR--FMSKPYASCGGTEETRTKSTTGSMLFLASGLVHFSSSLQRITATSSTGAELVALPTCEKQGIYLSNLLMELGRMQLSKDKVLCDNKGALHLASNANLRSRSKHIAIRFAALRE 217
            +++L+VDD+L+ G +  L+    +++ + F +TDLG +S  LGME+++         NK     ++K              V ++ + D    +     Y++++G L++L   TR DI YS ++     ++   +A  G +++   KST+G +  L SG+  ++S  Q   A S+  AE +A  +   Q I+L  LL++L ++Q+   ++ CDN+ A+ ++ N     R+KH  I+F  +RE
Sbjct:  786 IVSLYVDDLLVIGSNSELVQQFKSEMFEVFDMTDLGEMSYFLGMEISQSEQGIFINQNKYAGEVLKKFKMFNCKPVPTPLVVNEKLSKDDGCEKVDETLYRSLIGCLLYLA-ATRPDIMYSSAELKLHGYVDSDWA--GSSDDM--KSTSGYLFSLGSGVFTWNSKKQETVAQSTAEAEYIAASSAVNQAIWLRKLLLDLRQVQMQATEIKCDNQSAVAISKNPVFHGRTKHFKIKFHFIRE 1022          
BLAST of mRNA_H-paniculata_contig32218.8677.1 vs. uniprot
Match: A0A6H5JPV6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPV6_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 7.820e-17
Identity = 68/240 (28.33%), Postives = 109/240 (45.42%), Query Frame = 0
Query:    1 MLTLFVDDILITGPSETLLIGVHNDLMKKFYITDLGNVSLRLGMEVTRNK-------IQKPSIRKVMQ---------------------QTADDTQLNEQGIKQYQAIVGSLIFLTQCTRFDICYSVSQAARFMSKPYASCGGTEETRTKSTTGSMLFLASGLVHFSSSLQRITATSSTGAELVALPTCEKQGIYLSNLLMELGRMQLSKDKVLCDNKGALHLASNANLRSRSKHIAIRF 212
            +LT++VDDILITG ++ ++     +LM  F +TD+G V   +G+EV R+         Q P  R ++Q                     +   D  L  +  +++QAI+GSL+                                     STTG + FL  GL+ + +  + + A ++  AEL AL    ++ +Y+SN + E+G        +  D+ GAL +ASNA   SR+KHIA+RF
Sbjct:  187 ILTIYVDDILITGGNKEIVSRKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDTQRFQAIIGSLL-------------------------------------STTGYLFFLGGGLISYGAKARTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFETFRSVPINSDSTGALTVASNAMFSSRTKHIALRF 389          
BLAST of mRNA_H-paniculata_contig32218.8677.1 vs. uniprot
Match: S1S3R8_THECC (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 n=1 Tax=Theobroma cacao TaxID=3641 RepID=S1S3R8_THECC)

HSP 1 Score: 88.2 bits (217), Expect = 1.230e-16
Identity = 71/240 (29.58%), Postives = 118/240 (49.17%), Query Frame = 0
Query:    1 MLTLFVDDILITGPSETLLIGVHNDLMKKFYITDLGNVSLRLGMEVTR-----------------NKIQKPSIRKVMQQTADDTQLNEQ------GIKQYQAIVGSLIFLTQCTRFDICYSVSQAARFMSKPYASCGGTEETRTKSTTGSMLFLASGLVHFSSSLQRITATSSTGAELVALPTCEKQGIYLSNLLMELGRMQLSKDKVLCDNKGALHLASNANLRSRSKHIAIRFAALRE 217
            +L+L+VDD+L+TG SE  +     +L K+FY++DLG++S  LG+E+ R                  K Q    +      A + +L+ Q         QY++++G L+ L   TR D+ +S S  A          G  ++   KST+G +  L +G   +SS  Q   A SS  A+ VA  +     I++  +L +L   QL    +  DNK A+ +A N     ++KHI++++ ALR+
Sbjct:  273 ILSLYVDDLLVTGGSEDAIRKFKQNLEKEFYMSDLGDMSYFLGLEIKRIDRGIHVSQHKYVLEMLEKFQMNECKATASPLAVNEKLSSQFGYELENPSQYRSLIGCLLNLC-ATRPDVIFSDSDWA----------GSLDDA--KSTSGYVFTLGNGSFSWSSHKQDTVAQSSAKADYVAAASVANHAIWVRKVLHDLTMPQLEATDLWLDNKSAIAMAKNPIFHGKTKHISVKYHALRD 499          
BLAST of mRNA_H-paniculata_contig32218.8677.1 vs. uniprot
Match: A0A507DRT1_9FUNG (DNA-directed DNA polymerase n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DRT1_9FUNG)

HSP 1 Score: 87.8 bits (216), Expect = 1.280e-16
Identity = 56/153 (36.60%), Postives = 91/153 (59.48%), Query Frame = 0
Query:   69 LNEQGIKQYQAIVGSLIFLTQCTRFDICYSVSQAARFMSKPYAS----CGGTEETRTKSTTGSMLFLASGLVHFSSSLQRITATSSTGAELVALPTCEKQGIYLSNLLMELGRMQLSKDKVLCDNKGALHLASNANLRSRSKHIAIRFAALRE 217
            L+   IK+YQ+IVGSL++L   TR DI YSVS+ +++++ P        G + +TR +ST+G +    +  + + S  Q  T+ S+  AE +AL  C K+ ++L  +L E+  ++L +  V  DN+ A+ LASN     R+KHI IR+  LR+
Sbjct:   66 LSSAQIKEYQSIVGSLMYLMLGTRPDIAYSVSRLSQYLAAPSGGDENVLGYSTDTR-RSTSGFVFLYNNAAIAWKSQRQTSTSLSTAEAEYIALAECAKEALWLKGVLSEVLPIKLEQMTVFEDNQAAIKLASNPVHHQRTKHIDIRYHFLRD 217          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig32218.8677.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2N9FGB3_FAGSY3.750e-2433.78Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A6H5K9R3_9PHAE3.690e-2233.87Integrase catalytic domain-containing protein n=1 ... [more]
A0A438ES44_VITVI3.840e-2233.33Retrovirus-related Pol polyprotein from transposon... [more]
A0A438JV93_VITVI2.370e-2130.49Retrovirus-related Pol polyprotein from transposon... [more]
A0A151U0L5_CAJCA3.940e-1832.47Copia protein n=1 Tax=Cajanus cajan TaxID=3821 Rep... [more]
A0A2N9IKJ5_FAGSY1.270e-1730.34Integrase catalytic domain-containing protein n=1 ... [more]
A0A1R3HGA4_COCAP2.470e-1727.69Integrase, catalytic core n=1 Tax=Corchorus capsul... [more]
A0A6H5JPV6_9PHAE7.820e-1728.33Reverse transcriptase Ty1/copia-type domain-contai... [more]
S1S3R8_THECC1.230e-1629.58Cysteine-rich RLK (RECEPTOR-like protein kinase) 8... [more]
A0A507DRT1_9FUNG1.280e-1636.60DNA-directed DNA polymerase n=1 Tax=Powellomyces h... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..70
e-value: 2.5E-7
score: 30.6
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 118..217
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 118..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig32218contigH-paniculata_contig32218:1244..2084 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig32218.8677.1mRNA_H-paniculata_contig32218.8677.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig32218 1163..2132 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig32218.8677.1 ID=prot_H-paniculata_contig32218.8677.1|Name=mRNA_H-paniculata_contig32218.8677.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=218bp
MLTLFVDDILITGPSETLLIGVHNDLMKKFYITDLGNVSLRLGMEVTRNK
IQKPSIRKVMQQTADDTQLNEQGIKQYQAIVGSLIFLTQCTRFDICYSVS
QAARFMSKPYASCGGTEETRTKSTTGSMLFLASGLVHFSSSLQRITATSS
TGAELVALPTCEKQGIYLSNLLMELGRMQLSKDKVLCDNKGALHLASNAN
LRSRSKHIAIRFAALRE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like