prot_H-paniculata_contig31633.8530.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig31633.8530.1
Unique Nameprot_H-paniculata_contig31633.8530.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length127
Homology
BLAST of mRNA_H-paniculata_contig31633.8530.1 vs. uniprot
Match: H3H656_PHYRM (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H656_PHYRM)

HSP 1 Score: 90.9 bits (224), Expect = 9.520e-19
Identity = 46/125 (36.80%), Postives = 70/125 (56.00%), Query Frame = 0
Query:    8 WLDKHFKKLAQAGMVFANPQAWFGSVAMAVPKKDTY-------RMVADYRAVNSLVAPSAMPMPNLEEIRRGMAGASVFCILDLLQGYWRMALDPQAREIFTMVTTKGVYAPTKVPQGVLNTTNY 125
            +LD+H   L + G++F N ++ + S    V KK+         RM  D R+VN    P   PMP LE +   + GA VF +LD  +GYW++ L P ++EI++ VT +G+Y PT+VP G  +   Y
Sbjct:  683 FLDRHTTTLMKHGLIFKNHRSRWASAPRIVKKKEQADDPLADPRMTIDTRSVNERTEPMPWPMPVLEVVIGELEGAKVFFVLDWFRGYWQLPLHPDSQEIYSFVTHRGIYTPTRVPMGATDAVAY 807          
BLAST of mRNA_H-paniculata_contig31633.8530.1 vs. uniprot
Match: A0A6G0W968_9STRA (RT_RNaseH domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W968_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 9.580e-19
Identity = 45/120 (37.50%), Postives = 71/120 (59.17%), Query Frame = 0
Query:    7 EWLDKHFKKLAQAGMVFANPQAWFGSVAMAVPKKD-TYRMVADYRAVNSLVAPSAMPMPNLEEIRRGMAGASVFCILDLLQGYWRMALDPQAREIFTMVTTKGVYAPTKVPQGVLNTTNY 125
            E+LD+H  +L +AG+V+ N  + +      VPK D +YRM  D R VN+   P   PMP LE     + G   F  LD  +GYW++ L P ++E+FT++T +G++ PT+V  G  ++ +Y
Sbjct:  497 EFLDQHIDELVKAGLVYLNTHSRWALPPRIVPKSDGSYRMTVDTRGVNARTDPLQWPMPQLEVALGCVTGCRFFFTLDWFRGYWQLPLAPSSQELFTIMTHRGMFTPTRVLMGGCDSVSY 616          
BLAST of mRNA_H-paniculata_contig31633.8530.1 vs. uniprot
Match: A0A6A3FJ70_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3FJ70_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 9.590e-19
Identity = 44/124 (35.48%), Postives = 73/124 (58.87%), Query Frame = 0
Query:    6 AEWLDKHFKKLAQAGMVFANPQAWFGSVAMAVPK---KDTYRMVADYRAVNSLVAPSAMPMPNLEEIRRGMAGASVFCILDLLQGYWRMALDPQAREIFTMVTTKGVYAPTKVPQGVLNTTNYF 126
            +++L  H  +L Q G+V  N  + +   A+ V K   KD +R+  DYR VN +  P A  +PNL  +   + GA      D+ +G+W++ LD  ++EIF++ T +GVY PT+VPQG +++  +F
Sbjct:  105 SDFLRSHVAELQQFGLVRLNNASRWACAAVPVRKAGLKDAFRLTTDYRPVNRMTVPIAAAVPNLVVVTSRVRGAQAMAKFDMFKGFWQLPLDEDSQEIFSIKTDEGVYTPTRVPQGAVDSAMHF 228          
BLAST of mRNA_H-paniculata_contig31633.8530.1 vs. uniprot
Match: H3H4S7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H4S7_PHYRM)

HSP 1 Score: 90.9 bits (224), Expect = 9.840e-19
Identity = 46/125 (36.80%), Postives = 70/125 (56.00%), Query Frame = 0
Query:    8 WLDKHFKKLAQAGMVFANPQAWFGSVAMAVPKKDTY-------RMVADYRAVNSLVAPSAMPMPNLEEIRRGMAGASVFCILDLLQGYWRMALDPQAREIFTMVTTKGVYAPTKVPQGVLNTTNY 125
            +LD+H   L + G++F N ++ + S    V KK+         RM  D R+VN    P   PMP LE +   + GA VF +LD  +GYW++ L P ++EI++ VT +G+Y PT+VP G  +   Y
Sbjct:  685 FLDRHTTTLMKHGLIFKNHRSRWASAPRIVKKKEQADDPLADPRMTIDTRSVNERTEPMPWPMPVLEVVIGELEGAKVFFVLDWFRGYWQLPLHPDSQEIYSFVTHRGIYTPTRVPMGATDAVAY 809          
BLAST of mRNA_H-paniculata_contig31633.8530.1 vs. uniprot
Match: A0A6G0WGE6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WGE6_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.770e-18
Identity = 44/119 (36.97%), Postives = 71/119 (59.66%), Query Frame = 0
Query:    8 WLDKHFKKLAQAGMVFANPQAWFGSVAMAVPKKD-TYRMVADYRAVNSLVAPSAMPMPNLEEIRRGMAGASVFCILDLLQGYWRMALDPQAREIFTMVTTKGVYAPTKVPQGVLNTTNY 125
            +L++H  +L  AG+V+ N  + + +    VPK+D +YRM  D RAVN+   P   PMP LE     + G+  F  LD  +GYW++ L   ++E+FT++T +G+Y PT+V  G  ++  Y
Sbjct:  680 FLEQHMAELEAAGLVYLNTTSRWATPPRIVPKQDGSYRMTVDTRAVNARTQPLQWPMPQLEVAMGAVVGSRYFFTLDWFRGYWQLPLGSTSQELFTIMTHRGMYTPTRVSMGGCDSVGY 798          
BLAST of mRNA_H-paniculata_contig31633.8530.1 vs. uniprot
Match: A0A6A3GVC4_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3GVC4_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 1.880e-18
Identity = 44/125 (35.20%), Postives = 71/125 (56.80%), Query Frame = 0
Query:    8 WLDKHFKKLAQAGMVFANPQAWFGSVAMAVPKKDT-------YRMVADYRAVNSLVAPSAMPMPNLEEIRRGMAGASVFCILDLLQGYWRMALDPQAREIFTMVTTKGVYAPTKVPQGVLNTTNY 125
            +LD+H   L   G+V+ N ++ + S    V K++         RM  D R+VN    P + PMP L+ +  G+ GA VF +LD  +GYW++ L P ++E+++ VT +G+Y PT+VP G  +   Y
Sbjct:   26 FLDRHTAALLAHGLVYKNHRSRWASAPRIVRKREQDVDPTADRRMTIDTRSVNERTEPMSWPMPVLDVVLGGLEGARVFFVLDWFRGYWQLPLHPDSQELYSFVTHRGIYTPTRVPMGATDAVAY 150          
BLAST of mRNA_H-paniculata_contig31633.8530.1 vs. uniprot
Match: A0A6A3Z230_9STRA (RNA-directed DNA polymerase n=12 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Z230_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 3.380e-18
Identity = 45/126 (35.71%), Postives = 71/126 (56.35%), Query Frame = 0
Query:    7 EWLDKHFKKLAQAGMVFANPQAWFGSVAMAVPKKDTY-------RMVADYRAVNSLVAPSAMPMPNLEEIRRGMAGASVFCILDLLQGYWRMALDPQAREIFTMVTTKGVYAPTKVPQGVLNTTNY 125
            E+LD+H + L   G+V+ N ++ + S    V KK+         RM  D R+VN    P   PMP L+ +   + GA  F +LD  +GYW++ L P ++E+++ VT +G+Y PT+VP GV +   Y
Sbjct:  400 EFLDRHTRALLDHGLVYKNHRSRWASAPRIVRKKEQDSDPTADPRMTIDTRSVNEKTEPMPWPMPVLDVVIGELEGARFFFVLDWFRGYWQLPLHPDSQELYSFVTHRGIYTPTRVPMGVTDAVAY 525          
BLAST of mRNA_H-paniculata_contig31633.8530.1 vs. uniprot
Match: A0A6A3VFD8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3VFD8_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 5.950e-18
Identity = 48/131 (36.64%), Postives = 69/131 (52.67%), Query Frame = 0
Query:    2 SRDKAEWLDKHFKKLAQAGMVFANPQAWFGSVAMAVPKKDTY-------RMVADYRAVNSLVAPSAMPMPNLEEIRRGMAGASVFCILDLLQGYWRMALDPQAREIFTMVTTKGVYAPTKVPQGVLNTTNY 125
            S D   +LD+H  KL + G+VF N ++ + S    V KK+         RM  D R VN        PMP LE +   + GA VF  LD  +GYW++ L   ++E+FT +T +G+Y PT+VP G  +   Y
Sbjct:  504 SPDDRAFLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPSADPRMTIDTRGVNERTEAMPWPMPVLEVVLGALEGAKVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAY 634          
BLAST of mRNA_H-paniculata_contig31633.8530.1 vs. uniprot
Match: A0A6G0MLJ8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0MLJ8_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 6.170e-18
Identity = 48/131 (36.64%), Postives = 69/131 (52.67%), Query Frame = 0
Query:    2 SRDKAEWLDKHFKKLAQAGMVFANPQAWFGSVAMAVPKKDTY-------RMVADYRAVNSLVAPSAMPMPNLEEIRRGMAGASVFCILDLLQGYWRMALDPQAREIFTMVTTKGVYAPTKVPQGVLNTTNY 125
            S D   +LD+H  KL + G+VF N ++ + S    V KK+         RM  D R VN        PMP LE +   + GA VF  LD  +GYW++ L   ++E+FT +T +G+Y PT+VP G  +   Y
Sbjct:  369 SPDDRAFLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPSADPRMTIDTRGVNERTEAMPWPMPVLEVVLGALEGAKVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAY 499          
BLAST of mRNA_H-paniculata_contig31633.8530.1 vs. uniprot
Match: A0A6A3Q7S3_9STRA (Uncharacterized protein n=6 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3Q7S3_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 6.290e-18
Identity = 48/131 (36.64%), Postives = 69/131 (52.67%), Query Frame = 0
Query:    2 SRDKAEWLDKHFKKLAQAGMVFANPQAWFGSVAMAVPKKDTY-------RMVADYRAVNSLVAPSAMPMPNLEEIRRGMAGASVFCILDLLQGYWRMALDPQAREIFTMVTTKGVYAPTKVPQGVLNTTNY 125
            S D   +LD+H  KL + G+VF N ++ + S    V KK+         RM  D R VN        PMP LE +   + GA VF  LD  +GYW++ L   ++E+FT +T +G+Y PT+VP G  +   Y
Sbjct:  504 SPDDRAFLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPSADPRMTIDTRGVNERTEAMPWPMPVLEVVLGALEGAKVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAY 634          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31633.8530.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
H3H656_PHYRM9.520e-1936.80Reverse transcriptase domain-containing protein n=... [more]
A0A6G0W968_9STRA9.580e-1937.50RT_RNaseH domain-containing protein n=1 Tax=Aphano... [more]
A0A6A3FJ70_9STRA9.590e-1935.48Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]
H3H4S7_PHYRM9.840e-1936.80Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A6G0WGE6_9STRA1.770e-1836.97Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6A3GVC4_9STRA1.880e-1835.20Reverse transcriptase domain-containing protein n=... [more]
A0A6A3Z230_9STRA3.380e-1835.71RNA-directed DNA polymerase n=12 Tax=Phytophthora ... [more]
A0A6A3VFD8_9STRA5.950e-1836.64Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]
A0A6G0MLJ8_9STRA6.170e-1836.64Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]
A0A6A3Q7S3_9STRA6.290e-1836.64Uncharacterized protein n=6 Tax=Phytophthora fraga... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10coord: 2..121
e-value: 6.5E-25
score: 89.7
NoneNo IPR availableGENE3D3.30.70.270coord: 61..126
e-value: 6.5E-25
score: 89.7
NoneNo IPR availablePANTHERPTHR45731:SF12coord: 7..123
NoneNo IPR availablePANTHERPTHR45731FAMILY NOT NAMEDcoord: 7..123
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 2..126
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 18..126
score: 9.183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig31633contigH-paniculata_contig31633:729..1109 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig31633.8530.1mRNA_H-paniculata_contig31633.8530.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig31633 525..1217 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig31633.8530.1 ID=prot_H-paniculata_contig31633.8530.1|Name=mRNA_H-paniculata_contig31633.8530.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=127bp
MSRDKAEWLDKHFKKLAQAGMVFANPQAWFGSVAMAVPKKDTYRMVADYR
AVNSLVAPSAMPMPNLEEIRRGMAGASVFCILDLLQGYWRMALDPQAREI
FTMVTTKGVYAPTKVPQGVLNTTNYF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom